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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000166_pilon:215111..223445+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043437 ID=XLOC_043437|Name=XLOC_043437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8335bp|location=Sequence derived from alignment at sc0000166_pilon:215111..223445+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCG
ACATGAAATGCTAACTTGGATCAATGACAGTTTAcaatcaaattttacaa
aaatagaaCAAATGGCTTCAggtatacatttttttaaatcctgaaaatag
TCGTGTTTCGCGgcattttaatttcgcggttttctgAACTCGACCGCGAA
ACCACGAAATTTTCATGCAATGAAGTATTTTGACGGCCAGATGACTATTC
TGACGACCAATTTTCCACCGGTCGGTGGACGACTATCCACCGATCGAATA
ACTATCTAGATGGCCGAATTTCCCACAATTCTAACCCTCTTGGCGACCAG
GGCTTGGGTAGAATCACACAAATAAATCACTGTATTAATCGGATTAATGC
ACAGCAGGGGAATAGGAATGGCCAAATACCATGTACCGTGGTTTTTCTAA
TCTAACGCGTAGTCTAATTATTAACGCGTagccaaaattctgcataatta
atTTCACTCTAATTATTACGCGTGATCAAGccttggaaaagaaaaattag
acaggaaagttttatttttgataaacttctttctttcaaaaacacaaatt
aaAGGGATCTTCGTCATCCTCCTCTGGCTCCTCCAAATCAGCTAATGCTT
GTTAATACATTATACGATCTATATGTAATATATATTACACAAGCCTTTAA
CGCGTACTTAAAACACTTGAATATCGTAATTAATTGTTCTCTTGTTTTTC
ACGCGTAGCGtcgaaaataattatttattgccacgcgttaaattagaaaa
aacacGGTAGGGTTGCAATTTTTAGCGAATATAAAGAAATCAATATtaat
cgataacaatcgaaAGCAATCAGCGATTAATCGATAGCaatcgataacaa
tcgaatCCAATCGATAAGAACGTAAAGTCTTAGtatcgattggctatcga
ttatttatcgattatttatcgatcactatcgattattatcgattaaaatc
gattaatatcgattaatatcgattgattTCCCGTATCGATTTCATCGATT
GGGTACGCGCCTggttcattgcgtcacagcaaaaagtttgtttttatttt
agtttgtatctttgaaataccccatcggatttaggaagggtgtcggattt
aggacgaCTCACagtatttgtttcaatccgtgatcctaaggcttaatttt
tttttctcatcttcaatttactgaagaaagcatgaatttgatgcgagagt
tagattgtcaacaaagtgctgtaaaaaataattgaatgaaagaagaactt
aagatcttaaatatttaaatttaaatgaaGAATTGTTGCGAAAAACCaaa
ccggctgggaacagtagttttgccagaaaagttttatttttgattggttc
aatcgaaataggagatttggaaaaactttttatgcttggttttttgcaca
aacccctgtaactatgtgCAAGCACCCCATTGCTAAGATattgaaaccac
tgaaaatgaaagtaaaatcggcccgcaCTCCAAGTCcagtaatcttgata
taggagtttaagcaaAGACTGCCTGTACTGTACGCAGCAGCAATAAAAAT
AATCATAACaatactcaaaaaaattacGTTCCCGtcttttttactgtttt
ttgcCTAGGCAAAATAGCATACATAGTAAGTATATAAGCAGGCTatgcct
ttaattggctgtaaaaaatttTTGCAACTGTAGAATTTGGTACAATTTTC
Aacaatatagaccttttttcaaagaggacatcctgttgaataattatgta
ttccagtcataaaaacaatgataaagtcATGCATAatttactgtatcatg
catattgtaataattatgcatggttttatcattgtttttctgctggacta
cataattattcaacagggtggcctctttgaaaaaggtctattaggggcca
ctcacatatcAATTTTCCCACACTTAAGCATCATTCATACGCTAATTAAA
AAACCCACCCACCCCCCTACCCTTAGCATCATATTATGAAATAAACCGGA
AATAGATGAAAACCCTTTTTCCTTTCTCACTTCAAGTATTGATGTTCAAC
TGCCAGAGAAGTTGCTTCCCCCTTCTGTCTGTTTGGTACATTTCGCTCGC
TTGTTTTTCTAATAGTGGTTTTGTTATATGACTTTTACACAGATTGGATC
CCAGACCCACATTAGTTGTGATGCGGGaaaaaaaGGCCCCAAACTTTTTT
AACATAATGAGCGTCTCCGGCATTTTACTATACCAATTTATTCTCAATGC
CGTGAAAAAGAGACAAATTTGAAGAAGTGAGGATGTTTTGTTGAATCTTG
AATATGAAGAGGCTGCTACCAGAAAAATAATAAGTATGAAAGTTAtagtt
ttctggaaatttgaacaTCTCTTGGACCTCGAAAATTGATATGTCTAGTA
GATTTTCTTAGTGTCACTCTATCTAATCCACCCACCCTATAGCTTCGGAA
TGGCGCTAAGCGCGGTCAAAATCAATATGTGAGTGCCCCTTTAGAACAAt
tctatttttaaacaaaattaaccatcaaattttttcatcttcctcCTTCA
TCTTCAATCAAGCACTCAAAATCTACTAAAGCTGAgtacataagatattc
ttatgaTTATTGATATTTCCTGAAACACTGTTTGTTGCGTGCTGCTATGG
AGTGCATGACGCAACTCACATAACAACTAACGCATAGTGCGCAAGGAGGT
TCCAGGTACCACctaaaaattcaggtcccacctaaccCTAAAATTCTCAC
CCTCAATCCAGACTACCAGATCCCAGCTGAAAAATCCCCACACAAAATTA
TACTAAATTCAGCAACGAAACAAAAATTCCTACTGTATAATGATAAAAAG
GAGAAAGGTTTAGTAtgtaaaagaattatttatagaatatgaaatataga
agaaattataattgaattggaaataagaaaaaactaacatACTTTTACCA
AAACACCAGACTCCCATCTAAAGAAATTAATCCCCACCTTAAACTTATTt
gtcccacctaaaacctgaaaatttccaaatcccagctggaaatttttgac
ccagAACACCAAATCCCCCactatcttgggggggggggtgcacactatga
acTTACAAAGTCCCCTTCTGTTGGATGATCATTTTGGGTGCCTCATcatg
gaagataatttgttttgatgctccctggctttgggaagtagtgATGTTTA
TGGTTGTTTTCAATGGGAAATAGCAAACTTGAGTTTACATgtatcattta
gtttttgcttttttgtgGATTTTCTGCTAATCCAACGGCAGCGCAGTTTG
GTTACTTTACAAATGTCACTCAAATGTTAATTGTGGCAATGTGTGTTGTC
TATGCATTTGTTCGCCATTTTTGCCATCATGTCTTGGAAAAATAGTGTTA
AGATCCCAGAAATGTGCCAGGAAAGTTACAACAAATGAGACAATTTAATC
CTTAAGTCAAACTTTCAAAGTGGCAATTACAATGTTTATAactcatcaaa
atttttctgaaagGGGTGATAAGTGTTGTCTCATCCTTTTCTCTAGTCTA
TCATTTTGATAAACCTCAGTTGATTTAGATcactttgttgaatttttaaa
agcCCTTTTAACTatcttactcaaaatttattgtaGTAAATGATACCGTA
AGATAAAATTCTAGTCCATTTGACAATGCATACTTCTAATTTAAAAAACC
TGAACCCTACTAcaggaccttgaaaaccttgaaaaccttgaaaatggacc
actcaaccttgaaaaccttgaaatccatcaattttctgggaaaacccttg
aaaaccttgagaaatcgctaaaaaccttgaaaagtagTTCTTCATATTCA
TTCTTTTTGTCATACAAGCTTTTTAATAGGGCAGTGGCTGAGTCTAGGTT
TTTCTCTAGAATCGCAAATTGAGGTATCTCAATCCCTTTACAATGAActa
gtttttttcattttttctatcaattGTCTGCTAGTAGTATCTTACCAGAT
CTTACAAAACTTATCTGAGAGCAGGGGTCTTATTTTGGCCCGGTGAATGG
CAAATTTCGGCAGCCTAAAGACTCtaaacaaattaaattccctgGTCTTG
GAAATCCATTTGCTGGCCgatgaaattttgctgctttctATCCAGTCAtt
caaaaagtaagaataagtaCGTTCTTAAACTGTTTGTCATGgggaaattt
ccaaaaattgccTGCGACGCTAAACCTTTATAACATTTAGAGAATTCTAT
ATTCACATGTTTCTGTTGTGATTCCATGTCTCAAGGAATGCaacatattc
ttttatcattagctgAGTTTTTGAGCCCTAGGAAATTGGCTGTTCCCCAA
TTTTCTTCAGGCCATTAATCATTCCATTCATATTATGTCACGTTACCCTA
TTTATGAACTGGATACCCCAGAGTATTCTGGTTGACGTCTTGGAACAATG
GCCGTTCATCCTTAAAATTTCGAGCATCGAAAATAATTTCCTTAAAACAA
CACTTCTGCCTTTTGAAAGagtcttaaaaatcaaaattttctcttgtTAG
CGCAAACCATGGTCACTGTAAACATTTGGCTTTTacttctaattctttat
ttcgACAGTTGAAAGACTAGGTAGCCGGAGTTAAAATGTGGTATATATCG
TTCTCGAGAGGGAGATAGGAATTTTACTGTGGAAATAATTCGCCGGCTGC
CAAAAGccaataaattttatttgccgtcctctatttttctttcgcCTAGT
accactctgaaaaaaaaaccaaaacctgTTGAGAGCCATGtcaactgagt
atcaaaaaaaccttgaaatatgccaaatcctttgccaaaaaccttgaaaa
accacttaaaaatgaccaaaaaaaccttgaaaaccttgaaaatcctgaaa
aaaaatttgtagacACCCTGCAGCAATCTTGATTTATTTTACCACTAACA
GAAAAAGCTCCCACCCCCTCCCTAGTACGAAAAGGGTGGACAGAATTCTC
TCCTTTTGAGATATGAATATATACATTCAACTTCCCAGcaagaagaattt
aaaaaaacattttaacgaCCTCCATTCAGACTCACAAAGCCTAGTTGCAA
CACAGATATAAAATATTGACTagctctttcaaaaaaattgactagctctt
tcaaaaaaattgtcaaaaaatttgaaattcattaaCATTGAGTCAAATAG
AAGACTTTTTGCTAAACAGGATACTGCATTTTTAGTGCTTCTCGTGTCAT
ATATCGAGGCGCATATTTCCAGGGGTTTTCTGCTATCAGTTAATGATAGT
AGAAACTCCATCTTAAATTTAGTTTTGAAACTCCttgataaaaaatatct
tttttgaaaaagttttgtaatCTTGCAAACACTAGGTATTTCTCGTTTGC
TCTATTTGAGTTGTTTTGCTTGAtgattttttaacatttgaGTAGTCTTG
TTATATTTTCTTAGGTAAAAATGTCTTGAGTATACAATATTCTTTCTTAA
CAAAAGCAAAACTCTCACCACAAGGGGTCTATCATGCACCCACAGTTAGT
GCATTTAGTAGATTAGATGAATTGTGAAACCTTTTGTTTTTGTCTTCTAA
CTGAACCTGAAGGGCTTTGTAAACAAGATTGTTTGGATAtcctgtttaaa
atttttcatttctgatTTCCTCTTTAGGTGCTGCATATTGTCAATTTCTT
GATATGCTGTTTGAAAGTGAGTCaagtttttattggattttatGATTTGA
CTGGTTATGGATGCATTGTGTTCTGCAGGTTTTTAATGTCCCCTATCTGG
GTCCCGAATCCCCCATTTGTATTTCTCTTCTCCCTGACCCACCCTTTTCT
TCGATTCCCACACTTGAAGAACTGTCAAGAACAATAAATTTACATCCTCT
TTTATAACTTAGCAATCGAGTAATATTTCCCTGCAGCAAACATACAAATA
TATAAACATTTCTGCACTCAGCTGCACTTCACATAAGATGTTTTTGAAAT
CTCCATTGGGCTTAGCCCTCCCCATCGAGATAGAAATATTCAATTACCCC
TCCTAGACAGAAGAGGATCCCATGGCTTTCCTAGTCATATCTATTAATTT
CCTTTTCAGACTGTGTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTTA
GAACATGAGTACATTGTCAATTGGAAACTGCTACAAAATGGCTTCAAAAA
GGTTGGCGTAGATAAGGTAAGTGGTGGAATGTTTACTTTGAAGCTTATTT
CTCTACAGAGTTTAGGGgttgacaaatttgattttgatggaCATACAATT
GTTGCACTTTTACCAATCCTTCTTTTTGGGTATATTTTGATGAGGtagta
ttattttttgttatcaGGTTTTCTCCTATAATTATTCCACCGTTTTTATC
GTGTTATTTCCGTTTCCCATAGGTTACCTCATCTTGTTTTGACTTTTCGT
TTAGACTATACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATT
TCGAATTTTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGA
CAAGAGTACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGA
CGGAAAGAAACCTGCTGCAGCTGGCTCAAGAAATATGGCAGCTCCCTCAA
AGTCAAGGGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCT
GTATCAAAAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAAT
GGACACTGTAACTGCCGAAGTAAGTTGTACTTGGTTGACTGCCAACAGAA
AGAAACTCTCTATAGTAgggggggaatttgtaaaatcgctcgactttttt
agtcaaagcacttatACATTATTGGAAAGGTAAGatgtaggggaatcaaa
ataacataggttccaattttttttcgtacactttggtgtgtttttcagat
aaatatgacggtctcaggcaaaagtcatagggtcaaaatttaatgaaaat
tttagcttcagaaaagagagacctgttgtatatttttggaaagctctcaa
aaatagtgtgtttttttttcaaccagaaatagcttttttgtccacttttt
gcactttttgaagctcaatgtCTCGAGTTAGGTAGAGAAATCAtatatac
tcgcaatatatctctaatcttaattttttaagagctttccaaaaatatac
aacatgtTTCTCTTTTCTCAAGCTCAAAGCAAGACACCAAAGTGtctgaa
aaaaattggcaccttttatatgtcattttgattcccctaccccttagact
tccaaaaatgtataacaagtgctttgactaaaaaagtcgagtgACCTcca
aaaatcgaacaaattccCCCCTACTACTATGTTATTTGGGTAAACTGGAT
CGAAACAAAGCAAAGTTTTCTGTCATCATTCTTCAGAAATGTCAAAAAGA
ATTTAAGTCGATTACGACAAAAACGAAACTGTTCTGTTTGAAGTATAAAA
GTAACGTGAATATCGATATTCAGTTTTTTCATTACTTTCTAGCTCTCAGA
AATGAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTCG
GCAAATTACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGA
ACACCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgaggtatt
tttttcttttgataaattGAAGGAATTGACTCCCCCGTCTTCATTGTCAT
GTTACTTTTGATTgacttttctttcatttcgcggaAATTAAAGTAGCGCT
GTGTCAATTATTCGAATCGACTATTTTGATCGTAAAGCACGTGCACACTC
AGGAAAATGGTTTTTTAAAGCACGATAATGAAGGAATTAGATAATCACGT
ATCCGTTTCCATTTGTCGGACGTTTTGTTGTCCTCTCATGCTATCGTCTC
ATATCCGATtaataaaccttactccataactcgaagttTCCTTGATTCGA
GCAGTTTTGTGTTCCTCGTGGGTGCCCGAGTTATGGAAACTCGACTGAGA
AAGATAAAGgtcttagaaaaaaataaatgcgAAGTTTATTATATCGGCCG
TTCAAATTTAGTAACCTCACTAGTTTTGTAGCTAGATGGACTCGAACGTT
ACAAAAGTCAGCGTAGTTTAGAATGCAATTTCCCTTCGTCAAATACTTCT
TTGAACATTTTAGGATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCAG
AATATATCGATGGAGGTGAACCTGAAGAATTCTAA Coding sequence (CDS) from alignment at sc0000166_pilon:215111..223445+ >XLOC_043437 ID=XLOC_043437|Name=XLOC_043437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000166_pilon:215111..223445+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCG
ACATGAAATGCTAACTTGGATCAATGACAGTTTAcaatcaaattttacaa
aaatagaaCAAATGGCTTCAgATGGCTGTCAACGTTTTCAACACTGGCGC
AACATCTGACAATCTCAGTCGACATGAAATGCTAACTTGGATCAATGACA
GTTTAcaatcaaattttacaaaaatagaaCAAATGGCTTCAgGTGCTGCA
TATTGTCAATTTCTTGATATGCTGTTTGAAAGTGCTGCATATTGTCAATT
TCTTGATATGCTGTTTGAAAACTGTGTACCAATGAAGAAAGTCAAAGTTC
AGGCTAAGTTAGAACATGAGTACATTGTCAATTGGAAACTGCTACAAAAT
GGCTTCAAAAAGGTTGGCGTAGATAAGACTGTGTACCAATGAAGAAAGTC
AAAGTTCAGGCTAAGTTAGAACATGAGTACATTGTCAATTGGAAACTGCT
ACAAAATGGCTTCAAAAAGGTTGGCGTAGATAAGACTATACCAGTAGATA
AATTGATCAAAGCACGATTCCAAGACAATTTCGAATTTTGTCAGTGGTTC
AAGAAGTTTTTCGATGCAAACTACGCTGGACAAGAGTACGACGCATTGGC
CATCCGTGGAGGTCTCCAACCCATTGCTGACGGAAAGAAACCTGCTGCAG
CTGGCTCAAGAAATATGGCAGCTCCCTCAAAGTCAAGGGCCGCTCCACCC
AAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAAAAGCACCAAGTAG
TAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACACTGTAACTGCCGAAA
CTATACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATTTCGAA
TTTTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACAAGA
GTACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACGGAA
AGAAACCTGCTGCAGCTGGCTCAAGAAATATGGCAGCTCCCTCAAAGTCA
AGGGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATC
AAAAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACA
CTGTAACTGCCGAACTCTCAGAAATGAAGACTAGCGTGGACGGATTGGAA
AAAGAGCGAGATTTTTATTTCGGCAAATTACGTGATATCGAAGTATTGTG
TCAAGAAGAAGGAGCAGTGGGAACACCCCTTAGTGAAAAAGTACTGGCCA
TCTTATACGCAACTgagCTCTCAGAAATGAAGACTAGCGTGGACGGATTG
GAAAAAGAGCGAGATTTTTATTTCGGCAAATTACGTGATATCGAAGTATT
GTGTCAAGAAGAAGGAGCAGTGGGAACACCCCTTAGTGAAAAAGTACTGG
CCATCTTATACGCAACTgagGATGGTTTCGCACCACCGGAAGAAGAAGAA
GGGGCAGAATATATCGATGGAGGTGAACCTGAAGAATTCTAAGATGGTTT
CGCACCACCGGAAGAAGAAGAAGGGGCAGAATATATCGATGGAGGTGAAC
CTGAAGAATTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000166_pilon | genome | sc0000166_pilon:215111..223445 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-807:8264 |
| Aaloc | 583-735:7593 |
| Aaloc | 268-582:6505 |
| Aaloc | 163-267:6162 |
| Aaloc | 124-159:5730 |
| Aaloc | 1-120:1 |
|
