XLOC_043436 (mRNA) -

Overview
NameXLOC_043436
Unique NameXLOC_043436
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000166_pilon:199989..200816+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043436 ID=XLOC_043436|Name=XLOC_043436|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=828bp|location=Sequence derived from alignment at sc0000166_pilon:199989..200816+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAGGGGTTCATTTAACGACCCGAAACTGCCAGCATATTGTAATTC ATGGACTATGATTAGAGATACCATTTGGTATGCTGTGGAAGTTTTTCTGC TCTATCTACAGCAAAATGGAACCCTGTCATTACTGGAGATGAATAGTCAT TTAGAATCGCTACGTACCATTTGCACAAGCGTCAACATTGACGCGATGGC TCTCTTCAAACATAGTATTCAAATGTTCATGCAAATTGAAGGATTTGTTG ACGCTAATAAAATACTCAGAGACGTTAGATCAAAACTTGACAAAGGTTTT GATGAGACTGAAAAAACGTTAGCTGAAAATCAGGCTAAATTGAATGCTAT TCATTTGAATATGAAAGCGACAAAAGAAGCTGACGTTGATAAACCATTGA GAATCGATGTCAAATTTGCGTTTCCAGACGGTGTTGACTTCAGTCTAGAT GATGATTGCAAAGAGGCTGATGATATTCAGTCTACTTTTGAAAAAGCTAT GTGTTTGTACTATAGTGGAGTTCCGCTCAAAACTTTGATGATTGGGTACC GCATGGAAGATGGTCACCTTTCGAACAATTCACCATATACACGCATTGAG TTCGaaataacatcaaataaaaTGTCTTTTGATGAATATCAAGACAGACG CTCTGATAAATCTAAAGCTCTTTGGAGGTATCTAAAAGATGCATTTTTGA ACCACCTCCCCGAAGTTACTGCTAAGTTGTGTTATTGGAAGCATGGATCA ATTAAACTTTGTGTATTACTTTGTAATCAAAGTTGCCAAACTTTTACCGA Gattcatttgaagaaaatgaatttttga

Coding sequence (CDS) from alignment at sc0000166_pilon:199989..200816+

>XLOC_043436 ID=XLOC_043436|Name=XLOC_043436|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000166_pilon:199989..200816+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAGGGGTTCATTTAACGACCCGAAACTGCCAGCATATTGTAATTC
ATGGACTATGATTAGAGATACCATTTGGTATGCTGTGGAAGTTTTTCTGC
TCTATCTACAGCAAAATGGAACCCTGTCATTACTGGAGATGAATAGTCAT
TTAGAATCGCTACGTACCATTTGCACAAGCGTCAACATTGACGCGATGGC
TCTCTTCAAACATAGTATTCAAATGTTCATGCAAATTGAAGGATTTGTTG
ACGCTAATAAAATACTCAGAGACGTTAGATCAAAACTTGACAAAGGTTTT
GATGAGACTGAAAAAACGTTAGCTGAAAATCAGGCTAAATTGAATGCTAT
TCATTTGAATATGAAAGCGACAAAAGAAGCTGACGTTGATAAACCATTGA
GAATCGATGTCAAATTTGCGTTTCCAGACGGTGTTGACTTCAGTCTAGAT
GATGATTGCAAAGAGGCTGATGATATTCAGTCTACTTTTGAAAAAGCTAT
GTGTTTGTACTATAGTGGAGTTCCGCTCAAAACTTTGATGATTGGGTACC
GCATGGAAGATGGTCACCTTTCGAACAATTCACCATATACACGCATTGAG
TTCGaaataacatcaaataaaaTGTCTTTTGATGAATATCAAGACAGACG
CTCTGATAAATCTAAAGCTCTTTGGAGGTATCTAAAAGATGCATTTTTGA
ACCACCTCCCCGAAGTTACTGCTAAGTTGTGTTATTGGAAGCATGGATCA
ATTAAACTTTGTGTATTACTTTGTAATCAAAGTTGCCAAACTTTTACCGA
GattcatttgaagaaaatgaatttttgaATGGATAGGGGTTCATTTAACG
ACCCGAAACTGCCAGCATATTGTAATTCATGGACTATGATTAGAGATACC
ATTTGGTATGCTGTGGAAGTTTTTCTGCTCTATCTACAGCAAAATGGAAC
CCTGTCATTACTGGAGATGAATAGTCATTTAGAATCGCTACGTACCATTT
GCACAAGCGTCAACATTGACGCGATGGCTCTCTTCAAACATAGTATTCAA
ATGTTCATGCAAATTGAAGGATTTGTTGACGCTAATAAAATACTCAGAGA
CGTTAGATCAAAACTTGACAAAGGTTTTGATGAGACTGAAAAAACGTTAG
CTGAAAATCAGGCTAAATTGAATGCTATTCATTTGAATATGAAAGCGACA
AAAGAAGCTGACGTTGATAAACCATTGAGAATCGATGTCAAATTTGCGTT
TCCAGACGGTGTTGACTTCAGTCTAGATGATGATTGCAAAGAGGCTGATG
ATATTCAGTCTACTTTTGAAAAAGCTATGTGTTTGTACTATAGTGGAGTT
CCGCTCAAAACTTTGATGATTGGGTACCGCATGGAAGATGGTCACCTTTC
GAACAATTCACCATATACACGCATTGAGTTCGaaataacatcaaataaaa
TGTCTTTTGATGAATATCAAGACAGACGCTCTGATAAATCTAAAGCTCTT
TGGAGGTATCTAAAAGATGCATTTTTGAACCACCTCCCCGAAGTTACTGC
TAAGTTGTGTTATTGGAAGCATGGATCAATTAAACTTTGTGTATTACTTT
GTAATCAAAGTTGCCAAACTTTTACCGAGattcatttgaagaaaatgaat
ttttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043436XLOC_043436-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000166_pilongenomesc0000166_pilon:199989..200816 +
Properties
Property NameValue
Aaloc1-828:1