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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:210335..216148+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043425 ID=XLOC_043425|Name=XLOC_043425|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5814bp|location=Sequence derived from alignment at sc0000367_pilon:210335..216148+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTGAACCTTAGAAATGAAAGGCGCTGTGGCAAACTGAATCTCTA
TCTACTTGGTTTAATGATAAGCTTACCTTTTCTTATGttgctttttgtga
tttttactgGCTTGGGTAATAAAGGAACTGAAACTGCGACAGTAGTTTAC
AATGGCACAAATACATCGTCAATGTGGAACATTCTATTAAGAAATGCTTC
AGAAAATGACTCATTGAACACCACTAGATCACTAAACGATTCAGAAGATT
CAAGTTCACAAATGGATGAACAGCCTTccattattattgttattcttatt
ttattttggttCAGTCTCACAATTCTCGGTGTTTTTCTAGTGATGTATCT
TGTTTGTGGAAATACATATGTCTTATGTAGATACATTTCAAAAAGATATG
TAACTCAAGAAACCAAACAAAGGATACTACCCTGCATTCAGAGTAAACCT
TTAGTAAGTGTAATGAAAGAACTTTACCATTGCATTGTTGAAAGCGTTGA
TCGTTTGGTCATTGAAAACGATACAATAGATCTGCTACTTAAATGTTTGG
ATCTTGCTAGCTTCTCAGACAGCATCGCGATGTTTACGGTTGGCAGCGTG
GCTGAACAATTTAGCTTACCTTACTACCCTGGGCTTGGTATATTTCATCA
TGGAGATATTTCAGATTTTGACTTAATGATGAGTCCAAAGGAAGAATCAG
TTGCTTTTGAATCTGGTCAAGGTACAAAATATCGAGTTGTAAGTTTCGCA
GCAAATCTTCCAAAGggatttgtttacctttatgaAGAGAACGAAATACT
TTCCGCCAAAAGCAAGAGGGATGACTTAGAAGATATTGTATTGAACATtc
ctttaaagattttttacaagGATAACTGGTTGAGTTCCCTCCTGTGCACC
AGTGCTTCGGCTTGTTATTACACACCAGGCAATTGCTGTTCAAATGATCG
AATCACGGTCAAAATTAATGGCCCAGCAATAGCAGTCTTTAGTCGAGCGT
TTAGCTCGTACAACCTTTATTATGATATTACACTTTCTATCCATTGTATT
GATTGGCCAAGCCAGATTTCGGATTGGGAACACCGACCTAAAAAATGGCC
CAGTAACGAAGACGTGAAAAGAATTATGACATACGGGTGTCATCTTGTTC
CAAAATCTCCTGAAAATGGCGATGAAAAAGCGTGGAGAATTTCGTTCTCT
AAAAACGAAGTTGAACTTTCCAAGCTGATTCCTCCTGTCGCGAGGATGTG
TTTTATAACAATCAAATCTATACGTAAAAATGATTATTACTTGTCAAAAA
TATCAAGTTATTCACTGAAAACCATATTTTTGAATACGTTAGAAAAGACA
GCTCCAAATCAATGGTTCTCCTGGGACGATGAAAATATTTCTACATGTTT
TGATTTGTTATTAAACGAAGTTATAAGAACATTTGAGACAAAAGAGTGTC
AACATTTCTGGATTTCAGACATCAATTTATTGACATGTGATGGTTCTACT
GGtatgttttcaaagaaagacGACACATTCTGCGCAAAGATTTTTCCaca
tttccaaaaatcaaatgaatatTATATTGTGCAAATTTTGAAAGTGTTAC
GACGTGTCAAGGAGAACCCACACTTATACGTTCAACCTTTCCCCAAGAAT
TTCCTGAAACGTTTTCCGAAGATTATTGAAACTGAAAATCAAGATAATGA
CTTTATTAGTAGTGAGTCAGTCGAATTGATAAATGTAGCATAATTTCTTT
CTCGCTCCCATTAAAAATCCCTACAATAGGTAGGACCTCGACAAACTTTT
TCCGGTCAAAACAATTTGCAAAGAAACCATTGGAAAGAATTATTTTGATA
CTTTAAAGTGACGGTGGACGAAACAAaaccagtcttttacccccttgaaa
ttgtaaaataactttttaccacctggaaaaatggaaaaaaaaactctttt
agaatttagaccccctggaaattatTCTCGAGTTACCCTTTTGGAAATGT
TCCTTTAACCCCTCCTCCTCTGTATGGTGGATATAAAATGGTATGGCCTA
Atgtatttcttttataaataagattttaaatatattcttacatttttttt
accATCTAAGATTATAATTTTAAACGTGAATCTTTGAATGaaagtttctt
ttgtttaacGCCCCTTCTCTTTGACCGCCCTTTTTAATGAGTGCCATCGG
CTAAATTATCATTCTGTATTTGGTTTAAAATTTGTAATGACATTACTTGC
AAAAATAGTCTAAGTAAAAAACTAATGTTGTCGCCAATTCGAATTTTTAT
TaattgaatctttctataattcgaactaaaattcTCCGTCGAAAGCCTTG
TAAACTGCTTTCAGtatttcgaacaaattagaGTCCCTGTTCGACTTTGA
ATTAGTGATAGTGCCCTGTACACCAATTCCATACAGTTTTTACCCAGGGT
CTTCTTGAAATATAGTGAAGTTATATtcactgaaaaaaatacaaactagc
AACTAACCATGACAATCTGTAACAAAAACCCAATTTACATTTTGGAAGAA
AGTGTACcggtgtaaaaaaaaaataatattttcatttatagcCTAACAGC
AATGAGtttttttGTGTCTGTAGAATAAGACAGTACAGTCTTTCCGAAAA
AGAGGTGGAACCGATCTAAGGTTGGGAATGATTAAATGTGATGGTCCAGA
AAAATGTTAATGTTATAAATCGTGTGACTTTGATCAGCTTTGGGTTCATG
GAAATTTCGTATGTTTAAGTGGGAACATTgattcagtgccgtaggaagca
ttttcatattggggggctgaagtttagtgacaccgcgagggccaaccatg
gtttggcccgaggggggaaattttgaaaatttgagctttagattgcttaa
aaatacactcaaaacatgcacataaacacaattatgacaaattaaaaaag
aaaaacttagcattttgcaaaataaccatttttgaaaaaattattggggg
ggcatagcccccccttgccccccccagttgctacggcactgtgatttgac
taaaaaaattacagtttttCTAATTTGGCGCCGCACGCGAAACTCTTTGG
TCTAAGACAGCTAAAACagctataaattaacctttaaaaggtcagcgttt
tagaaaagctgaaCAAGTTATTTTGCATTTCAGTCTggcattatgcttat
tttttaccgaatttgagcctaagtatgcttataatctttatgcttaaaaa
aagagtgttaaaactttcttcaaaaTCTTCTCATCTTATTGTGAGGTAAC
TAGCTGATAGGTAGTCCGAAAggtagttttgaaatatgaagaGCCCCCAG
CGCAGTCCCTGATCCCACCCCCGCCATCACGCCCTCCGCTGGGGGACTCT
TATGAGGTTTCTGAATGATGGACCACGGTACAATTCTAGGAAACTTATCA
GTCGTTAAGAATCTCAATAATGTAAATTCTCCTTTTACTTCTTGGTCCAT
TTTATGGAATTTTTAAACTAGAGcttgtggaatttttttttcaaagattt
tcagtACATAAAAGCATGTAAGATGTTTTTTGGATTAAATCATATGGGTC
TTTACTAAATATATAAACCTACTAACTGGATTTTTAGTTTGTTAATGGTT
TCTGTGAAAACTCATCAATTTGAACATTCGCCATAGTTTCGACAAGAcat
gaacatttttttaatgtttacaaTCACATGATTAGAATCAAATTGCGAGT
TGACCACTTCTGTACTTATTTATTGCATCAATTTAAAGATTCCTCATAGT
TTCGACAAGAcatgaataattttttaatgtttacaaTCACATGATTAGAA
TCAAATTACGATTTGACCACTTCTGTACTTATTTATTGCATCAATTTAAA
GATTCCCCATAGCTTCGACAagacatgaatatttttttaaggtTTACAAT
CACATGATTAGAATCAAATTACGAGTTTACAACTTCTGTACTTTTTGATG
GCATCAATTGTACTTATAACATCAAATTTATAACACCTATATATACCTAT
ATAGCTttgctatttgaagatttttcttgAAGTACAATGTCTCTTGACCT
TAGAAATGAAAGACGCGTTGGCAAACAGTATTGTTGTCTATTGGTTATAA
TGGCAGTCTGTTTCACACTACCTGTTCTTATTGTGCTTTTTGCGATACTC
ACTGGCTTGGGTATTGAAGGAACTGAAACTGCGGCAGTAGTATACAATGG
TACAAATACATCGTCAACGTGGAACATTCTATCAAGAAATGCTTCAGAAA
ATTACTCATTGAACACGTCTAGATCACTAAACGATTCAGAAGATTCAAAT
TCACAAATGGATAAGCTGTCTGTCTTTATTCTTTTGTTTGGGTCCATTCT
CGCTCTTTTTCTATTGACGTATCTTTTTTGTGGAAATACACATGTCTTAT
GTAGATACATTTCAAAGAGATATGTATCTCAAGAAACCAAACAAAGGATA
CTACCCTGCATTCAAAGAAAACCTTTAGTAAGTGTAATGAATGAACTTTA
CCATTGCATTGTTGAAAGCGTTGATCGATTGGTTATTGAAAACGATACAG
TAAATCTACTACTTAAATGTTTGGATCTTGCTAACTTCTCAGACAGCATT
GCGATGGTTTCGGTTGGCAGTGTGGCTGAAAAATTTAGCTTACCTTACTA
CCCTGGAATTCGCATATTTCAACATGGAAATATTTCAGATTTTGACTTAA
TGATAAGTCCAAAGGAAGAATCAGCTGCTTTTGAATCTGATCAAGGTACA
AAATATCGAGTTGTAAGTTTTGCTGCAAACCTTCCGAAAGGGTTTATTTA
CCTTTATGAAGGGAACGAAATACTTTCTGCAAAAAGCAAGAGGGAGAATT
TAGAAGATATTATATTAAACATGCCTTCATGGAATTTTAACATAAATAAA
TTGTTGTTGCCATTTTGCACCTGTGCTTCGTTTGGTTATTACACACCAGA
CAATTGCTGTTCAAAGGATCAAATTACGGTCAAGATTAATGGCCCAGCAA
TAGCAGTCTTTAGTCGAGCGTTCAGCTCGTACAACTTTTATTATGATATC
ACACTTTCTATCCATTGTATTGATTGGCCAAGCCAGATTTCGGATTGGGA
ACACCGACCTAAAAAATGGCCCAGTAACGAAGAcgtgaaaaaaattatga
catACGGGTGTCATCTTGTTCCAAAATCTCCAGAAAATGGCGATGAAAAT
GCGTGGAGAATTTCGTTCTCTAAAAGCGAAGTTGAACTTTCCAAGCTGAT
TCCTCCTGTCGCCAGGATGTGTTTTATAACAATCAAATCTATACGTAAGA
ATGATTATTATTTATCCAAAATACCGAGCTATTCACTGAAAACCATATTT
TTGAATACGTTAGAAAAGACAGCTCCAAATCAATGGTTCTCCTGGGACGA
TGAAAATATTTCTACATGTTTTGATTTGTTATTGAACGAAGTTATAAGAG
CATTTGAGACAAAACAGTGTCAACATTTCTGGATTTCAGACATCAATTTG
TTGACATGTGATGGTTCTACTGGtatgttttcaaagaaagacGACAAATT
CTGCGCAAAGATTTTTCcatatttccaaaaatcaaatgaatatTATATTG
AGCAAATTTTGAAAGTGTTACGACGTGTCAAGGAGAACCCACACTTATAC
GTTCAACCTTTCCCGAAGAATTTCCTGAAACGTTTTCCGAAGATTATTGA
AACTGAAAATCAAGATAATGACTTTGTTAGTAGTGATTCAGTCGAATTGA
TAAATGTAGTATAA Coding sequence (CDS) from alignment at sc0000367_pilon:210335..216148+ >XLOC_043425 ID=XLOC_043425|Name=XLOC_043425|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3426bp|location=Sequence derived from alignment at sc0000367_pilon:210335..216148+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTGAACCTTAGAAATGAAAGGCGCTGTGGCAAACTGAATCTCTA
TCTACTTGGTTTAATGATGTTTTTGAACCTTAGAAATGAAAGGCGCTGTG
GCAAACTGAATCTCTATCTACTTGGTTTAATGCTACCTGTTCTTATTGTG
CTTTTTGCGATACTCACTGGCTTGGGTATTGAAGGAACTGAAACTGCGGC
AGTAGTATACAATGGTACAAATACATCGTCAACGTGGAACATTCTATCAA
GAAATGCTTCAGAAAATTACTCATTGAACACGTCTAGATCACTAAACGAT
TCAGAAGATTCAAATTCACAAATGGATAAGCTGTCTGTCTTTATTCTTTT
GTTTGGGTCCATTCTCGCTCTTTTTCTATTGACGTATCTTTTTTGTGGAA
ATACACATGTCTTATGTAGATACATTTCAAAGAGATATGTATCTCAAGAA
ACCAAACAAAGGATACTACCCTGCATTCAAAGAAAACCTTTAGTAAGTGT
AATGAATGAACTTTACCATTGCATTGTTGAAAGCGTTGATCGATTGGTTA
TTGAAAACGATACAGTAAATCTACTACTTAAATGTTTGGATCTTGCTAAC
TTCTCAGACAGCATTGCGATGGTTTCGGTTGGCAGTGTGGCTGAAAAATT
TAGCTTACCTTACTACCCTGGAATTCGCATATTTCAACATGGAAATATTT
CAGATTTTGACTTAATGATAAGTCCAAAGGAAGAATCAGCTGCTTTTGAA
TCTGATCAAGGTACAAAATATCGAGTTGTAAGTTTTGCTGCAAACCTTCC
GAAAGGGTTTATTTACCTTTATGAAGGGAACGAAATACTTTCTGCAAAAA
GCAAGAGGGAGAATTTAGAAGATATTATATTAAACATGCCTTCATGGAAT
TTTAACATAAATAAATTGTTGTTGCCATTTTGCACCTGTGCTTCGTTTGG
TTATTACACACCAGACAATTGCTGTTCAAAGGATCAAATTACGGTCAAGA
TTAATGGCCCAGCAATAGCAGTCTTTAGTCGAGCGTTCAGCTCGTACAAC
TTTTATTATGATATCACACTTTCTATCCATTGTATTGATTGGCCAAGCCA
GATTTCGGATTGGGAACACCGACCTAAAAAATGGCCCAGTAACGAAGAcg
tgaaaaaaattatgacatACGGGTGTCATCTTGTTCCAAAATCTCCAGAA
AATGGCGATGAAAATGCGTGGAGAATTTCGTTCTCTAAAAGCGAAGTTGA
ACTTTCCAAGCTGATTCCTCCTGTCGCCAGGATGTGTTTTATAACAATCA
AATCTATACGTAAGAATGATTATTATTTATCCAAAATACCGAGCTATTCA
CTGAAAACCATATTTTTGAATACGTTAGAAAAGACAGCTCCAAATCAATG
GTTCTCCTGGGACGATGAAAATATTTCTACATGTTTTGATTTGTTATTGA
ACGAAGTTATAAGAGCATTTGAGACAAAACAGTGTCAACATTTCTGGATT
TCAGACATCAATTTGTTGACATGTGATGGTTCTACTGGtatgttttcaaa
gaaagacGACAAATTCTGCGCAAAGATTTTTCcatatttccaaaaatcaa
atgaatatTATATTGAGCAAATTTTGAAAGTGTTACGACGTGTCAAGGAG
AACCCACACTTATACGTTCAACCTTTCCCGAAGAATTTCCTGAAACGTTT
TCCGAAGATTATTGAAACTGAAAATCAAGATAATGACTTTGTTAGTAGTG
ATTCAGTCGAATTGATAAATGTAGTATAACTACCTGTTCTTATTGTGCTT
TTTGCGATACTCACTGGCTTGGGTATTGAAGGAACTGAAACTGCGGCAGT
AGTATACAATGGTACAAATACATCGTCAACGTGGAACATTCTATCAAGAA
ATGCTTCAGAAAATTACTCATTGAACACGTCTAGATCACTAAACGATTCA
GAAGATTCAAATTCACAAATGGATAAGCTGTCTGTCTTTATTCTTTTGTT
TGGGTCCATTCTCGCTCTTTTTCTATTGACGTATCTTTTTTGTGGAAATA
CACATGTCTTATGTAGATACATTTCAAAGAGATATGTATCTCAAGAAACC
AAACAAAGGATACTACCCTGCATTCAAAGAAAACCTTTAGTAAGTGTAAT
GAATGAACTTTACCATTGCATTGTTGAAAGCGTTGATCGATTGGTTATTG
AAAACGATACAGTAAATCTACTACTTAAATGTTTGGATCTTGCTAACTTC
TCAGACAGCATTGCGATGGTTTCGGTTGGCAGTGTGGCTGAAAAATTTAG
CTTACCTTACTACCCTGGAATTCGCATATTTCAACATGGAAATATTTCAG
ATTTTGACTTAATGATAAGTCCAAAGGAAGAATCAGCTGCTTTTGAATCT
GATCAAGGTACAAAATATCGAGTTGTAAGTTTTGCTGCAAACCTTCCGAA
AGGGTTTATTTACCTTTATGAAGGGAACGAAATACTTTCTGCAAAAAGCA
AGAGGGAGAATTTAGAAGATATTATATTAAACATGCCTTCATGGAATTTT
AACATAAATAAATTGTTGTTGCCATTTTGCACCTGTGCTTCGTTTGGTTA
TTACACACCAGACAATTGCTGTTCAAAGGATCAAATTACGGTCAAGATTA
ATGGCCCAGCAATAGCAGTCTTTAGTCGAGCGTTCAGCTCGTACAACTTT
TATTATGATATCACACTTTCTATCCATTGTATTGATTGGCCAAGCCAGAT
TTCGGATTGGGAACACCGACCTAAAAAATGGCCCAGTAACGAAGAcgtga
aaaaaattatgacatACGGGTGTCATCTTGTTCCAAAATCTCCAGAAAAT
GGCGATGAAAATGCGTGGAGAATTTCGTTCTCTAAAAGCGAAGTTGAACT
TTCCAAGCTGATTCCTCCTGTCGCCAGGATGTGTTTTATAACAATCAAAT
CTATACGTAAGAATGATTATTATTTATCCAAAATACCGAGCTATTCACTG
AAAACCATATTTTTGAATACGTTAGAAAAGACAGCTCCAAATCAATGGTT
CTCCTGGGACGATGAAAATATTTCTACATGTTTTGATTTGTTATTGAACG
AAGTTATAAGAGCATTTGAGACAAAACAGTGTCAACATTTCTGGATTTCA
GACATCAATTTGTTGACATGTGATGGTTCTACTGGtatgttttcaaagaa
agacGACAAATTCTGCGCAAAGATTTTTCcatatttccaaaaatcaaatg
aatatTATATTGAGCAAATTTTGAAAGTGTTACGACGTGTCAAGGAGAAC
CCACACTTATACGTTCAACCTTTCCCGAAGAATTTCCTGAAACGTTTTCC
GAAGATTATTGAAACTGAAAATCAAGATAATGACTTTGTTAGTAGTGATT
CAGTCGAATTGATAAATGTAGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:210335..216148 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 886-1719:4981 |
| Aaloc | 529-879:4630 |
| Aaloc | 325-525:4429 |
| Aaloc | 67-324:4168 |
| Aaloc | 1-66:1 |
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