|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:1200673..1206440- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043413 ID=XLOC_043413|Name=XLOC_043413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5768bp|location=Sequence derived from alignment at sc0000003_pilon:1200673..1206440- (Clytia hemisphaerica_ch_hm2_pilon)
GGGTATACCGTTCTCCTTACTTTTATCTTTTCATCCGGAGCTTCAAGCTG
TAAACAAAAACATTCAACTTTCAAAATGGCGGAAAATTCGAAGGTAGAAA
AATCTGAAAATTTATCAACAGACCATCAACTGGGTCATGACAAGGGTATG
TGTTTAAATACTTTAACCTTTTCACTCCCAAGATTTTTAGAAATCGACTT
TTCTTAGATAAGGTTGTTTTTTTGCCTTGGTTTCTGCCTTTTTTCATGTG
TTGGCCGTTGTTAACTTTTGACTTTTTTCAAAGTCAAAATAAATTATGAT
AAAGCGACTTCACCACAGCCGTAATCTTTGACATGCATTGGATGCTAGTA
TTATATATGTCTTTTAACTCTTGCTCAACACAATGTCATGATGTTGGATA
ATTACCGTCAACTGCTCTAACTTTGAATTGGGACAATTGGTCAAATCTTA
GAGGGGATATGGTTGGTTGATTTCTGGACTGTATTTTCAGTTACTGTTTA
AATCTCTTTGACAACAAGCTTGTTTTGATACTTCAACCAAGTTTATCAAT
CAAACTTTGACCACCCCATAATCACAACCAAATGTATTTTTAAAGCATTT
CAAAAGTACTTAATTTAAAGAAGTAATAACAATTTAATCACACTCACGCT
GCTCATCATATCTTTGATGCCATCTTTTGTGTTTTTTTTTCTACAAAGAC
TTTTTTCCAGCGTTTGTTATTATTGACATGTCAAAGTTGGTCTAATATTG
ACATCTCTCATCTAATTCCGACACCCTTCTTTAGAGAAAGGAATAATATG
AAAGCTTGAATCACTGATTGAAAAAGGATTATCCTCTCTGACCACTAAGC
AAGAAAAACAGTTTCAACCTTTCTATAAATTTCAGCTGATAAAAAGGGTG
TCGGAATTAGAGGAGGGGTCTCGACATAAGACCAAGTTACGGTACAGATC
TCACAAGAAGAACGGAAGAACAGACTTTTTTTTATATCTGTGTTTGGACG
CTTGTGCATTTACGCGTTTTCTCTTAAAGATTTGAACCTCCAAAGTCATT
TGATTTGAATTAATGAACAACGTATTAAAAAATACACAATTTCTCTTTCG
CACCGAGTAGGCTTGTTTTAAATTGAAATATGAAAAAAATCTGTTGTGGA
ACACACGCGAATGTCTGGAATGAAGAAGACCAAATTAGTGGCAAAACGAT
GGAGCGTTTGATGTCCCTCGCGCGGCAAGTTACACACTCGTTTTTTGTTA
ATAGAACTGGAAGCTGGAACCTCGATATTCCAGGATTAGAAAAAGCTATA
TATACCTGTTATCTTTTTTCTTTAAAGAATCAACAAGCCATCAACATCGA
TACATTTTTTCTTCTTTCTTTTATTGAAATTCTTTTGCACACGGTACAAG
AAAGTTAAATGTCTCTTCTGATTGGCTAATTAAAAAAGAACAATAGAGAA
GCTGCACAGCTCAGCAAAAAAAGGTGAAAAGTTTCAACTCTTGTTGCGCT
CAAAGCGACAGCCTTTGAAGGCTTAATTTATGTAATTCATGCAATAAATA
AGCCGCGTTCCTTGCTCGCCGACCATAAAATGCTGAGTGGGTAGCGGCCT
TAACAATCAAATAGAATGGGCTTTCCTCTGATGTAAACACATGGCTCCGA
ATGGGGTTCTAGGTCCCCCCAACAAATTTAGGTCCCCCCCTACGATTTAG
GTCCCCCCACTTTTCAGTAAGGTTCAGGTCCCAGTTGAAATATAAAGGTT
CAGGTCCCTGCAAAAATTGCTTTCAAGGTTCAGGTCCCAGCAAAAAAAGC
TACTGTCATTTCTGGTAGTACTATTACTAGTTTTTTTACGTATCAACATG
GGACGTCAACCAACTGAGGAAGAGAAGAAAGAATTCATGTACATCATAAA
AATGCGGGGTTAAAAAAAATTGGGGGTCCAAATTGAAAATTTAAATAAAT
GTTGCCCACCATGGTTGGGCAACGAGAAAATTTTGGAATTTTAAGGGTGG
AAATCTGCCATTTTTGCCTACATTTTGATAGAATGTAAGAGATAATAAAT
TCAATAGAAAAATCCTTAACTTATTAACCAAAACAATAGTGAGGGGGTAT
TTTACAGTTTCCTAATTAGCCCCCCAGAACTTTAGTGTAGCCCTTCAGCT
CCCCCCACTTTTTTAGGTCCCCCCTGAGTTTAAAAAATGAGACAGCTCCC
ACCCACTTTTAAGCCAATTTGAGATTTACACCCCCCCCCAAATAAGTGGG
GGGGGCGGAGCCATGAAACAAACCTCAAGTCCTCTCCTGAAAATTGACAT
TGGGCGTACTGTATTTCCAATAATTATATAAAGACTAACTTGAAGACATC
AAGAGTGAAATGTAGCTAAATGCTTAGAACGCCTTGCGACTTAGATTTTT
TTTTCAAAACTGTAGATTAGACCCCAGCTCGAACCACCAAAGTCTCTTGT
CACTGATTCTGAGTCCGGCACGCTAGCAATGAAAATACGAAATTTGAAAA
TGTTTATAAAAGACACTACTACATATACGGGTGAACAGACCTCACGGGCT
AGGCTAACTGATCAATTATATAGATTACTCAAAAACATGCACGTAACACC
AAGGCAAATCCGTGCGATTTTGTCTGAATGACTAAGGCAACATGCTTTAA
TTTTTCAATGTGATCATCCCCCCCTTCAACAGCTAACTAAATAAAGTACT
CGATAAGGAACATTGAGAGTGAAATTATCTGGAAAAATAAGGGACTCTAG
GCTCGGAGCTAGCTCGGAGCCAAGTTAAGGTTCCTTATTATATTGAAAAA
GCGTATACTAACAAACGATACGGAACTCGTGAGAGTGCTTTTTAAACCTT
TGTCTTTGTTTATCTTCACAAGGTTTTGTTTATCTTTGCAACTTAGTTCT
CACTTTCGGCCTTTTGTCTATTCATTTTTAGCCTCCCACCTTCGATTTCA
GCCTCCCAACTCCCGCCTCCCAGCTTTCGTTTTCAGCCTCCCGTCTCCCA
CTTTCGTTTTCAGCCTCCTGCCTCCCGGCTCCCACTTTTCCTGTATGCCT
TTTTTCTTTTGTTTTTGCAAAAGCTCCAGAAATGAAAATACCATAACTTC
GTGTAATGCCAAAATACCTTGTCTAATTCCTGCATAGCAACTATCTGGTC
TTTAAAATGTTTATGATAAAACCTTCTATTACTAAACCTACTGAATAAGA
TGTGTTATAAAAAACACTCTAATACTCATAACTACTTTCAGCTTGGAAAA
ACCATGTGCTTTGTTTTTTATATAAATAAACCCTCATATTCTTTTAACGC
CCCCTGACAATTAGGCTAGGCTAAACTTACTTCTTTTCTCTTTCCTATTC
CAACAATACAGTACAATGCTTTATATATTTGAACATAATGCACATTGATA
GAATATTTCCCATGCATTGTATTATTATATATTGAAATCTGCAATAAAAA
CGAAAGTGGTCTCTTCTTCTTGGTGGCTCCATCGGAAAGCCTCCTTCTTT
TAAATGATGAAGGTTTTAATGACTGGCCCTAATTTTTTACATTAATGGCT
TTTTGATAATGACAAACAGTCATAATAACTTCATTTGTTTCAATCATTGA
TTCCAAGGATTGAATTCTTTCTTATAATAGTTCTCTAAACAAAAGTGGGA
ATTTGATGCAAGCGTTATTTTTTCAAAGAATTATTTCTGATTAGATGCAA
GCACTTTACCTTCATTCGATTGGATACTTCTTTTTAAACAATCACACGGC
AATTGTTTGAGTGAGCAAAATAAAACAAAATATTTGGCGCCTTCACTAGT
GTTTGCGATTGAACAAAATAAAACAATCTACTTTCCAGGGGTGTATTTTT
ATTTTTTCGATTTCTTCATGTTTGCCAATCCGTGGAGTCTTTATATATAC
CATAGCGAAAGCTCAAGAAACCGGTTAACTTAGTTTTTAAGTTTTGCAAA
TCCCCAAGATAGTCGTTTAGGAGAACGCAATGGTCTATTGAATAACAAAT
TATCTAGGTAACTTATGTGGAGTAATTAGCTATTCAAAAATCGCTGCGTT
CTCCTAAATGACTATTGGAAACACTCATTTTTTCCCGCTTTTCTCTGTCA
TCTTTTATTGGTTTCTTTTGTTGATTGCTTGTGTCATTTCTTGAAATGGA
AACACACAGTTTTTCCCCAGCTAACTTTGCAGACGAGATAGTTGACTACA
CGAAGCTACGGAAAAGGGATAGCGTTCAGATAAACCATTCACCCATTGCT
TATTCTTTATGAAGATATTTGGTAATCTGGATCGCTTCTTTTATCAGGCA
ATTTGATTAGTCAATAACATGTCACAAATAAAAGATTTTTTGAGATTATA
AATGCAACATCCTTATTAGGCTATATTACTGCTGTTTTGAACCAGGATCA
GGAGCATGAAATGTACTAAATGCACTAAATCCAGGCAATGCTGTACCTCT
CTTACAATGAGTGGCCCCATAATCCAAAACAAATCTACATATTTTTCTTT
GGTTTCCTTTTTTAGATATGGAGACAGTTTGGTTAGAAACACATCCAGAA
TGTCCTGTGTGTCTACAGCCATGTTTACAACCAGTTCAAACACCCTGTCT
ACACGTCTTTTGTTTCCTTTGTTTGAAAGGATTTGTGTATCGAAGCAAAC
GATGTGCTCTATGTCGAAGTGAAGTACCTTTTGAATACTTTCAAAATCCA
GTTGTGGTAGGTATTCTTTAGATTCTGAATACTGATTCCCTGCCTTTAGT
TATTATTATTGTTATTACTCTATTTGGTAATGAAGGTCTGTACAAAATGC
AATTGAAAATTTACTGATGTGGACCTACTATAAATAAAAATAATTTTATG
TGTCACTTTAGCCCTTGAAACATGAAAAAATCACTTAAAGATTCTAAAGT
TTTATACTTTAATAATGTTTTGATTTTTAACGTCAGAAAATGGCAGGCAC
ATACGCTGTTGCTGCTGGCTTTTTTAAATCCGAAATAGTACCAAGGATCA
AACTTTGCCTTAGATTTTGTTCAATATAAACACTTTTTTGTTATTAGACA
TCCAGTATATTTTGTAGAAATAATATAGCTTTATCAAGTTTTTTAGTTTT
CTTTATTCTTTTTTTCAACTCAAGCTTCAAATGGATATTTTTGGAAAGTT
TTTTTCACTGCTATTATTTAATTCATTCCCTTCACATATTTTGTAATCAA
AATTAAATTTGGGAAATTTTCCTTTCAGGTTAAAATCAAGAATGGAGAAG
CATCTCTAACCTCTTCAACATCAATAGAAATCACTGAAAAATATAATTGG
TTTTATGAGGGTCGAAACGGTTGGTGGGAATACGATGAAAGAGCACAGGT
TACTTTAGAAGAAGCATTTAAAACAGAGGCTCGCTCTTGTGAACTTCTTA
TCTCTGGTTTTTCATATTTCGTTGATTTTGGTGACATGGTTCAATTTCGT
AAATCACATCCGACTCGCCGGCGTCGCATCAAGAGAGACCGAATTGGTGT
TGATCGTAAAGGTGTGGCAGGACTAAAAGTCAGTTCATGCACAACCTCTT
CTGAATCACAAAATTTAGATTCAAGTAAATCAGACACAGACTTAACTTCA
TCAGAAAAAATAAAAGAGAAAAGCCAATCTGATCTCGCACTAGATACTGA
TGACTCGGAACAAGAACTGGTATCGCAGGCTAGTGGAAGTGTGGATATTC
CCAAGCCTGTGTCCTCTACAACATTTGATGAAAATGAACTTGCAGAACAA
TTGGATAAGACATTATGA Coding sequence (CDS) from alignment at sc0000003_pilon:1200673..1206440- >XLOC_043413 ID=XLOC_043413|Name=XLOC_043413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000003_pilon:1200673..1206440- (Clytia hemisphaerica_ch_hm2_pilon)
GGGTATACCGTTCTCCTTACTTTTATCTTTTCATCCGGAGCTTCAAGCTG
TAAACAAAAACATTCAACTTTCAAAATGGCGGAAAATTCGAAGGTAGAAA
AATCTGAAAATTTATCAACAGACCATCAACTGGGTCATGACAAGGGGGTA
TACCGTTCTCCTTACTTTTATCTTTTCATCCGGAGCTTCAAGCTGTAAAC
AAAAACATTCAACTTTCAAAATGGCGGAAAATTCGAAGGTAGAAAAATCT
GAAAATTTATCAACAGACCATCAACTGGGTCATGACAAGGATATGGAGAC
AGTTTGGTTAGAAACACATCCAGAATGTCCTGTGTGTCTACAGCCATGTT
TACAACCAGTTCAAACACCCTGTCTACACGTCTTTTGTTTCCTTTGTTTG
AAAGGATTTGTGTATCGAAGCAAACGATGTGCTCTATGTCGAAGTGAAGT
ACCTTTTGAATACTTTCAAAATCCAGTTGTGATATGGAGACAGTTTGGTT
AGAAACACATCCAGAATGTCCTGTGTGTCTACAGCCATGTTTACAACCAG
TTCAAACACCCTGTCTACACGTCTTTTGTTTCCTTTGTTTGAAAGGATTT
GTGTATCGAAGCAAACGATGTGCTCTATGTCGAAGTGAAGTACCTTTTGA
ATACTTTCAAAATCCAGTTGTGGTTAAAATCAAGAATGGAGAAGCATCTC
TAACCTCTTCAACATCAATAGAAATCACTGAAAAATATAATTGGTTTTAT
GAGGGTCGAAACGGTTGGTGGGAATACGATGAAAGAGCACAGGTTACTTT
AGAAGAAGCATTTAAAACAGAGGCTCGCTCTTGTGAACTTCTTATCTCTG
GTTTTTCATATTTCGTTGATTTTGGTGACATGGTTCAATTTCGTAAATCA
CATCCGACTCGCCGGCGTCGCATCAAGAGAGACCGAATTGGTGTTGATCG
TAAAGGTGTGGCAGGACTAAAAGTCAGTTCATGCACAACCTCTTCTGAAT
CACAAAATTTAGATTCAAGTAAATCAGACACAGACTTAACTTCATCAGAA
AAAATAAAAGAGAAAAGCCAATCTGATCTCGCACTAGATACTGATGACTC
GGAACAAGAACTGGTATCGCAGGCTAGTGGAAGTGTGGATATTCCCAAGC
CTGTGTCCTCTACAACATTTGATGAAAATGAACTTGCAGAACAATTGGAT
AAGACATTATGAGTTAAAATCAAGAATGGAGAAGCATCTCTAACCTCTTC
AACATCAATAGAAATCACTGAAAAATATAATTGGTTTTATGAGGGTCGAA
ACGGTTGGTGGGAATACGATGAAAGAGCACAGGTTACTTTAGAAGAAGCA
TTTAAAACAGAGGCTCGCTCTTGTGAACTTCTTATCTCTGGTTTTTCATA
TTTCGTTGATTTTGGTGACATGGTTCAATTTCGTAAATCACATCCGACTC
GCCGGCGTCGCATCAAGAGAGACCGAATTGGTGTTGATCGTAAAGGTGTG
GCAGGACTAAAAGTCAGTTCATGCACAACCTCTTCTGAATCACAAAATTT
AGATTCAAGTAAATCAGACACAGACTTAACTTCATCAGAAAAAATAAAAG
AGAAAAGCCAATCTGATCTCGCACTAGATACTGATGACTCGGAACAAGAA
CTGGTATCGCAGGCTAGTGGAAGTGTGGATATTCCCAAGCCTGTGTCCTC
TACAACATTTGATGAAAATGAACTTGCAGAACAATTGGATAAGACATTAT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:1200673..1206440 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 760-882:124 |
| Aaloc | 337-753:541 |
| Aaloc | 148-336:1252 |
| Aaloc | 1-144:5769 |
|
