XLOC_043410 (mRNA) -

Overview
NameXLOC_043410
Unique NameXLOC_043410
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000003_pilon:1138310..1139189-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043410 ID=XLOC_043410|Name=XLOC_043410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=880bp|location=Sequence derived from alignment at sc0000003_pilon:1138310..1139189- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACTGCATTTTCATCATTGTTTTATTACTTGTGGTTTTGATAAC AGAATGTGCCCCGATGATGGAAGGTTGCAAACGCTGGAATGGATGTGTCA CTTCTAAACCAAAAAAAACAGCAAAAGCGGGAAGAAGAAGAAAATTACAA GAAATCACTCCTAATGGTGTAGTTGGTATCCCAAAAGATATGGCTAGACA TTGTAAGTTCTACTAGATCAGTTTTTTTGTTTTTGAACGTAGGTTTGGCA GTTCTGTCACTATTGATGAGTGAGAAAGGGGCTGCTATTTAGAACTGGCG TTTTTTAGAAGGGAGTATTTCTTTTGATTATCAAACATTTCAGAAGGGTT CGCGAGTATGTATTTGGGTCACCTACAATCTGCATTTGTGGATGGTTGAA GAGTGGTAGTTTTATTATTGATTTGATCGTATATAAGACTATTACTTGCA TACCAGTGAACCTTCACTTTTACAAGACTCTTTCTTGAGCTTGGCATTGT ATTCTAGAGAAACTAAACATGTATACAGTTGACTCTCACGGGACTCTCAC TAATTCGAACTCGAACAGGGAATCTTATTTGTTCGAATTAAAGAGAGATT CCAATTATAGAAAGTGATTTAAAAGGGTTTTCCTTGACATGGACTAAAAA TAAGTTCGAAAAGTTCGAATAAGAGAGAGTGTTTGGATGATTTTCTGCTA ACTATTCATTCACTGATACTTTCTTTTTTTTCAGTTTTGAGGAAGTTGAT AGAATCGAAGGATTTTATGAACAAATTTACCAACAAGCAAGGTCAGACCT CTCCAGATGATTATGATATGGGCCGAAAAATTGTAAGAAAATTCAGAATC TCATTACGACAGCAATGGCATCAAACCTAA

Coding sequence (CDS) from alignment at sc0000003_pilon:1138310..1139189-

>XLOC_043410 ID=XLOC_043410|Name=XLOC_043410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000003_pilon:1138310..1139189- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACTGCATTTTCATCATTGTTTTATTACTTGTGGTTTTGATAAC
AGAATGTGCCCCGATGATGGAAGGTTGCAAACGCTGGAATGGATGTGTCA
CTTCTAAACCAAAAAAAACAGCAAAAGCGGGAAGAAGAAGAAAATTACAA
GAAATCACTCCTAATGGTGTAGTTGGTATCCCAAAAGATATGGCTAGACA
TTATGAAGTACTGCATTTTCATCATTGTTTTATTACTTGTGGTTTTGATA
ACAGAATGTGCCCCGATGATGGAAGGTTGCAAACGCTGGAATGGATGTGT
CACTTCTAAACCAAAAAAAACAGCAAAAGCGGGAAGAAGAAGAAAATTAC
AAGAAATCACTCCTAATGGTGTAGTTGGTATCCCAAAAGATATGGCTAGA
CATTTTTTGAGGAAGTTGATAGAATCGAAGGATTTTATGAACAAATTTAC
CAACAAGCAAGGTCAGACCTCTCCAGATGATTATGATATGGGCCGAAAAA
TTGTAAGAAAATTCAGAATCTCATTACGACAGCAATGGCATCAAACCTAA
TTTTGAGGAAGTTGATAGAATCGAAGGATTTTATGAACAAATTTACCAAC
AAGCAAGGTCAGACCTCTCCAGATGATTATGATATGGGCCGAAAAATTGT
AAGAAAATTCAGAATCTCATTACGACAGCAATGGCATCAAACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043410XLOC_043410-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000003_pilongenomesc0000003_pilon:1138310..1139189 -
Properties
Property NameValue
Aaloc202-345:145
Aaloc145-198:734
Aaloc1-144:881