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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:175473..178191+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043408 ID=XLOC_043408|Name=XLOC_043408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2719bp|location=Sequence derived from alignment at sc0000367_pilon:175473..178191+ (Clytia hemisphaerica_ch_hm2_pilon)
cagggCCACGCTCATGTTTTACGTCTATTGGATCTACCTGTACTGGAGAA
TTTACAACGAAacgaaatgttcaaaaatcaaaaagaccgcaaaaaaaaTC
GGGAAATGACATCTGCCGGAACTAGCCGGAGTGGATATTACTCAGCTAAA
TCAACTGATTTGAACTCTAAACCAACTTCTCCGGGTGGGTTGTTACCAGG
ATATAACACACCCGCCCGATTAACGCCAGTCTCACCCATATCAGAAACCA
CTGTAAACCAACAGAGAAGGTCTATCAAGAAAAGAGATTCAAACCATTCA
TTGAGTTCCGGATACTCATCTGATGCTGGCCGGACTTCACCGAGACAAAA
CTGGCAGAATTTGCGTAAGAAAGCAATCAAGAAGATTAAAACGCCGAAAT
TTGTGAATCAGTTATCAGAAATCCCCTCGTGGCAAAGAATAGCAGGAGCA
GAAAGCTGCAAAGGAAACCTTGGACTGGGAGCATATATCAGGATCGATAC
TCTAGGTCATGGTGATGTCTTTGTAAGTCAAAAACGTTGTTTTAGCTTCC
ATCTAATGTTATTCAGATGCTATGAACGTTAGCTGGACGTTAAAGTAACC
TTGTTCTCATGATATGATTACATGGTCAGTTTGTTTTCGTTTTAAATTTC
ACTTGTTATCCTTACTTGATGAAGGAGAAGTCATATGAGTCTAAATACTC
ATTAGTTACTAGGTATGAAAATTTCAAGGTACCCTTTATGAAGTGATGGA
GCcaatttttttggggaaaatagtcgcccaccatggttgagCGGCGAAGA
AAATCTTTCACTTTTTGCACCTATTAAACATCTTAAAACGTTTTCTAATT
GGGTAACAACATTTTTGTTatgactttagaaaaaaattagtcTGCTAAAA
AAGGATCCATGGCGATCCGACTGCAATTGTAACCAATATACTTTGTATAT
TCTATAGCTATTGAAGAATATATTTGATTACGAATGAAAACCTGATCTCT
TTACACCCAGGGATTCAAATATGCAGCAAAAGAAGAAAACCGCCACGTCG
ACTGCTTGAAGAAATTTGTCCTCCTTAGTGCTGgatgtgacgtcatcaga
atATCCAAACCAAACGTTCAAAAAATGACAGATAATGAAACGATATCAAA
AATAGAACAATTCGAACCGGGTTACCCGTCAGACGAGATTCTTTTCGAGG
TTTATCGACGATATCATGACTGGAGAACGTTTAGAGAAAAGTTGGTGGAT
GATATTGCGTTGTACCAAACCAATGTGACCAAAGCCATCAATAACCGTTC
TTTGTCCATACCGAAAATTCCAAGGATTGAAAATAAAGCGTATTCCCGGA
TTCAATCTCCTGTTGAACATTGGAATATGCTTAAAGAAGAGGGACACTTA
AAGCAGGAAGGTTCGTAAAATACTTGTGTATCAAATCTGAGAGATTGAAA
ATTAATGGTCTTCAAATATATCGagaattttgtcattttaacgttttttc
agaatttaaagttcgggcgagattTGCGATTTTAGCATTTCCAATTATTT
CATttgatatttcgattttggagagGTGTTCAGTGGCTTTTAGACTATAT
TCCAACCTTATTGGAACAATTTCAAGCTTTTGAACCCTGGAATCCTAAGC
TCTTAAGTCTCATTTTAGAACTCTACATTCCAAACTAACTTAGAGCACTT
AAAACATTCGtagtgtttaaaattttgcagggatCCCCCACTTTAACTCG
TACATCTTATCCATGAATGTTAAGGTCAAATTTGGGTTAGTTGGAAATCT
CTTTACTTCTAATATTTTCATATCCGATACATCTTCTGTTGAAACTTaat
ttaggcgtacaaactttcgtgagCATAAATGTTCgcaattttcgcaaatt
ttagcccttttcgcgaaagtaaatgtctttgaaaattcattCTAGGGCCA
TTCGCTAAAATTcgtgctcgcgaaaaattctctctaacatagaaaatctg
taaaagtTCTAACCtaaataaaatgtaagatttattGAACTTGTTAGCCT
GTCAAAGCCTCataagtaaaaaaacaaaagttacaatcaaattcaagaag
tatttgtccctctaagccattttatCGTGTGTAAATGTTCACTTAATGTC
TCGATTCGTGAAAAGTAACTGTCGTAAATGCCGCGATTTTTCGACCACGT
GAAAGTTTCTGTTTGTGAAAGTTTGTATACCTCAAGTAAGTTTGTCATCC
TTTGCTCAGAGTTTACATCGACACTGTTCCAAACATCAGATATTTCTCCC
TTGATCTACTTGATGTCAGGCTTCAGCTCATCGCTCCCATTTGTGTATAG
TGCATTCCttttgtcatttattctttgtcctattgttattttttagtcct
gatttttttgtattttttcttccACATATTGTTATATATTGGGTTTTTTG
AATTACAAATTGTCATGGTTAGTCGCTatagtttgtattttcttcaaTGT
GTATATGACTTCATTATATTTCTAGAAAACTCCCAATGGAAGGTGACACC
AATTCCATCAACTGAAAAAGATATGGACGAAGTGATCAAGAGATTACGTG
CCGCCCCTTTCCTTCAAGACCAACTTTTGAAAGCTAAAGGAAGTCAAAGA
CAACTTATCCTGACGCACGGCGGTGATCGTGTTAACCGTTTCCCGAAAGT
TGTGACCATAAAACAATGA Coding sequence (CDS) from alignment at sc0000367_pilon:175473..178191+ >XLOC_043408 ID=XLOC_043408|Name=XLOC_043408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000367_pilon:175473..178191+ (Clytia hemisphaerica_ch_hm2_pilon)
cagggCCACGCTCATGTTTTACGTCTATTGGATCTACCTGTACTGGAGAA
TTTACAACGAAacgaaatgttcaaaaatcaaaaagaccgcaaaaaaaaTC
GGGAAATGACATCTGCCGGAACTAGCCGGAGTGGATATTACTCAGCTAAA
TCAACTGATTTGAACTCTAAACCAACTTCTCCGGGTGGGTTGTTACCAGG
ATATAACACACCCGCCCGATTAACGCCAGTCTCACCCATATCAGAAACCA
CTGTAAACCAACAGAGAAGGTCTATCAAGAAAAGAGATTCAAACCATTCA
TTGAGTTCCGGATACTCATCTGATGCTGGCCGGACTTCACCGAGACAAAA
CTGGCAGAATTTGCGTAAGAAAGCAATCAAGAAGATTAAAACGCCGAAAT
TTGTGAATCAGTTATCAGAAATCCCCTCGTGGCAAAGAATAGCAGGAGCA
GAAAGCTGCAAAGGAAACCTTGGACTGGGAGCATATATCAGGATCGATAC
TCTAGGTCATGGTGATGTCTTTcagggCCACGCTCATGTTTTACGTCTAT
TGGATCTACCTGTACTGGAGAATTTACAACGAAacgaaatgttcaaaaat
caaaaagaccgcaaaaaaaaTCGGGAAATGACATCTGCCGGAACTAGCCG
GAGTGGATATTACTCAGCTAAATCAACTGATTTGAACTCTAAACCAACTT
CTCCGGGTGGGTTGTTACCAGGATATAACACACCCGCCCGATTAACGCCA
GTCTCACCCATATCAGAAACCACTGTAAACCAACAGAGAAGGTCTATCAA
GAAAAGAGATTCAAACCATTCATTGAGTTCCGGATACTCATCTGATGCTG
GCCGGACTTCACCGAGACAAAACTGGCAGAATTTGCGTAAGAAAGCAATC
AAGAAGATTAAAACGCCGAAATTTGTGAATCAGTTATCAGAAATCCCCTC
GTGGCAAAGAATAGCAGGAGCAGAAAGCTGCAAAGGAAACCTTGGACTGG
GAGCATATATCAGGATCGATACTCTAGGTCATGGTGATGTCTTTGGATTC
AAATATGCAGCAAAAGAAGAAAACCGCCACGTCGACTGCTTGAAGAAATT
TGTCCTCCTTAGTGCTGgatgtgacgtcatcagaatATCCAAACCAAACG
TTCAAAAAATGACAGATAATGAAACGATATCAAAAATAGAACAATTCGAA
CCGGGTTACCCGTCAGACGAGATTCTTTTCGAGGTTTATCGACGATATCA
TGACTGGAGAACGTTTAGAGAAAAGTTGGTGGATGATATTGCGTTGTACC
AAACCAATGTGACCAAAGCCATCAATAACCGTTCTTTGTCCATACCGAAA
ATTCCAAGGATTGAAAATAAAGCGTATTCCCGGATTCAATCTCCTGTTGA
ACATTGGAATATGCTTAAAGAAGAGGGACACTTAAAGCAGGAAGGGATTC
AAATATGCAGCAAAAGAAGAAAACCGCCACGTCGACTGCTTGAAGAAATT
TGTCCTCCTTAGTGCTGgatgtgacgtcatcagaatATCCAAACCAAACG
TTCAAAAAATGACAGATAATGAAACGATATCAAAAATAGAACAATTCGAA
CCGGGTTACCCGTCAGACGAGATTCTTTTCGAGGTTTATCGACGATATCA
TGACTGGAGAACGTTTAGAGAAAAGTTGGTGGATGATATTGCGTTGTACC
AAACCAATGTGACCAAAGCCATCAATAACCGTTCTTTGTCCATACCGAAA
ATTCCAAGGATTGAAAATAAAGCGTATTCCCGGATTCAATCTCCTGTTGA
ACATTGGAATATGCTTAAAGAAGAGGGACACTTAAAGCAGGAAGAAAACT
CCCAATGGAAGGTGACACCAATTCCATCAACTGAAAAAGATATGGACGAA
GTGATCAAGAGATTACGTGCCGCCCCTTTCCTTCAAGACCAACTTTTGAA
AGCTAAAGGAAGTCAAAGACAACTTATCCTGACGCACGGCGGTGATCGTG
TTAACCGTTTCCCGAAAGTTGTGACCATAAAACAATGAAAAACTCCCAAT
GGAAGGTGACACCAATTCCATCAACTGAAAAAGATATGGACGAAGTGATC
AAGAGATTACGTGCCGCCCCTTTCCTTCAAGACCAACTTTTGAAAGCTAA
AGGAAGTCAAAGACAACTTATCCTGACGCACGGCGGTGATCGTGTTAACC
GTTTCCCGAAAGTTGTGACCATAAAACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:175473..178191 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1116:2528 |
| Aaloc | 523-921:1011 |
| Aaloc | 1-522:1 |
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