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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:256557..259162+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043406 ID=XLOC_043406|Name=XLOC_043406|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2606bp|location=Sequence derived from alignment at sc0000367_pilon:256557..259162+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACTCGGCGGATCGAAAAGCAAAGTTGATATAAGAACCAAAAGCAA
AGTCGATTTCCGTTTGAAAAGAGTCGACATCATAGCCCAAGGATCCATTT
CTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCC
GATCGTGGAACAAAATCCAACCGACCAATCATTCTACACGAGGGAGAATA
TTTAGTTCGAGTCAGTCATGAACGCCTGTATGATTACGCATGCGCTGGAG
CATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCT
GGTAATTCATGGCGTGGATATGCAACAGGCTGGGAAAGCGAGACAACAAC
AGTCAAAGTTGAAGACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAG
GTATTTTAATCGGTATCGAGCAACAACCAATAGCTGAGGAAAATAAAGGA
caaactaaacaaaaagaatGGTACGTGAGCTGTTATTCTGCAGGGAAAGA
AGACATAGATCTCAATCATAATAgttcgaaagaaaaaaatgaagaagttg
ttttcaaatatttcaacaccaaaaaggAAGCACTGAAACATTGGAATGAT
TTACAGGCGTTGGtggcaaagaaaaaagaaagaggagCCATGTTGGTTGA
TTGCTTATCAGCTAAGGTTCTTAAATCAACTGGTTCAGATGACATTGTGG
AAAGGTGTAAAAAGGAATCGATCGAGAAAGGTTTTTGTGCTGAGGATCAA
CATGATGAATCGATTTTCCAAGTTATCTGGCTCATGTATCGATCCATTAT
GACTACCAGGGACATTGTAATCTTCCTCTTAACCATTCTATTGAAATCCA
TTGCCGATCTACTTAGCGTCCACTTACAGTTCGTTAAAGGAAGCATCCTC
GCCCTTTTAGTATCGACCTTCGACTCAGAAACACTAGACAAGAACAGTTA
CGTGCGATTCACATGCAATTATTTTTATACTTGTGATACAGACAAGCCTT
TAAGTATCGGGAGAGCTTTACTGATTTCAGGATGCATTATCAAACTTGTA
TCAACGGCAGTAAACATGATTGATATCTATATTGAACAAAATTTGAATTC
TGGTCGAAAGCTTGAAATGAGAAGGAGTATTTTGAAACACGCCATTAGGC
TAGATCAAGCATTTTATGATGTCAACTCATCGGGCCATATCAACGAATCA
ATGCAAGTTAATTCCATTCATCGCTTGGCAACAGGGCAGATTCCCAGAGT
CATACAAACCATTATTTCTATCTTTTTAAACCTGTATTACATTATCAAAA
TCGATTTCTATCTTGGAGCATTCACCATGTTTGTCACGACCTTCAATACA
ACAGTCTTCGTTAAAAGGTTCCATAATATGCTCAAAAAGTCATGGAAGTA
TGAATTAAAATGGGACATGGCACTTAGAGATGTAAAATCTAAACTGACTG
GTAATCGAGTTCTAGTGAAAATGTTTGCGAATGAAGATAAATACTTTCGA
GAATATGACCAGATATACGATGAATGCATGACTAGCTTCCAGTCTAAGTC
GATCACATATTGTTTATACATTGCTGCTCAACAATTGACTGGATTCGTTA
CTTTTGCTGTCAGTATTTACATCTTTTTGGATCATTTGACAGAAACTAAA
CTAACCACAGCTGAAATCACCAGCTTCTTCTTCCTGCTACAAACATTTAG
TGGGAATGTGCGATCCTTTTTCTGGCAAGatgaaaacatcaaagaaaatg
ttcgtCATTTGGATAAATTCATTCGTTTAAAGAATCAAGTTCCTGGTATG
GTTGATGGCGATGAAGTGATTAAAGATTTGAAAggagaaattatttttga
agatgTTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGA
AGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGAC
TCTGGTGCAGGTATGTGATTAGGGTGATTAGTTTTGTCTTTGCATTCCTC
ATCACAGCCTTATCATTGAAATGAGATCAAAACAATTGCTATTATATCAG
AGCAAATCTTACtatatcataataaaattatatttttgattgcaCCCTTT
TTAGTGTTTGAAGTAGTCTCACTTGAAAATGGTATCCTGGGAATACCCAG
ACGGCACACGACGTCAAAataacgtccatttgacattcataacgtccaaa
taacgttatttgaacgttaaaacaatgttgtgtgctgGGTAATgcctttg
aatttcaaaattttcaacaatcTTATTATCTTTCACTTTTAGGAAAATCT
ACCATCGCTAAACTCATCATGAGAGTTTACGATCCTGATTCTGGTAGAAT
TACAGTCGATGGTCATGATATGAAATCATTGAACATTCCCAAGCTTCATA
AAGAGATGGGAATTGTTTCTCAAAGCCCTGGTCTTATTACAGGAACCTTA
GAAGAAAACATCGCTTATGGTTCGATAAAAGACGTTTGCAGCCGCGAAGA
CGTCGAAAGAGCAGCGCGATTAACTAAGTGTGATTTCATCGATAAATTTC
GTTCAGGCTATGACACATATGCTGGAGGTTCAGGAATGCAGTTATCTGGT
GGACAA Coding sequence (CDS) from alignment at sc0000367_pilon:256557..259162+ >XLOC_043406 ID=XLOC_043406|Name=XLOC_043406|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4548bp|location=Sequence derived from alignment at sc0000367_pilon:256557..259162+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACTCGGCGGATCGAAAAGCAAAGTTGATATAAGAACCAAAAGCAA
AGTCGATTTCCGTTTGAAAAGAGTCGACATCATAGCCCAAGGATCCATTT
CTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCC
GATCGTGGAACAAAATCCAACCGACCAATCATTCTACACGAGGGAGAATA
TTTAGTTCGAGTCAGTCATGAACGCCTGTATGATTACGCATGCGCTGGAG
CATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCT
GGTAATTCATGGCGTGGATATGCAACAGGCTGGGAAAGCGAGACAACAAC
AGTCAAAGTTGAAGACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAG
GTATTTTAATCGGTATCGAGCAACAACCAATAGCTGAGGAAAATAAAGGA
caaactaaacaaaaagaatGGTACGTGAGCTGTTATTCTGCAGGGAAAGA
AGACATAGATCTCAATCATAATAgttcgaaagaaaaaaatgaagaagttg
ttttcaaatatttcaacaccaaaaaggAAGCACTGAAACATTGGAATGAT
TTACAGGCGTTGGtggcaaagaaaaaagaaagaggagCCATGTTGGTTGA
TTGCTTATCAGCTAAGGTTCTTAAATCAACTGGTTCAGATGACATTGTGG
AAAGGTGTAAAAAGGAATCGATCGAGAAAGGTTTTTGTGCTGAGGATCAA
CATGATGAATCGATTTTCCAAGTTATCTGGCTCATGTATCGATCCATTAT
GACTACCAGGGACATTGTAATCTTCCTCTTAACCATTCTATTGAAATCCA
TTGCCGATCTACTTAGCGTCCACTTACAGTTCGTTAAAGGAAGCATCCTC
GCCCTTTTAGTATCGACCTTCGACTCAGAAACACTAGACAAGAACAGTTA
CGTGCGATTCACATGCAATTATTTTTATACTTGTGATACAGACAAGCCTT
TAAGTATCGGGAGAGCTTTACTGATTTCAGGATGCATTATCAAACTTGTA
TCAACGGCAGTAAACATGATTGATATCTATATTGAACAAAATTTGAATTC
TGGTCGAAAGCTTGAAATGAGAAGGAGTATTTTGAAACACGCCATTAGGC
TAGATCAAGCATTTTATGATGTCAACTCATCGGGCCATATCAACGAATCA
ATGCAAGTTAATTCCATTCATCGCTTGGCAACAGGGCAGATTCCCAGAGT
CATACAAACCATTATTTCTATCTTTTTAAACCTGTATTACATTATCAAAA
TCGATTTCTATCTTGGAGCATTCACCATGTTTGTCACGACCTTCAATACA
ACAGTCTTCGTTAAAAGGTTCCATAATATGCTCAAAAAGTCATGGAAGTA
TGAATTAAAATGGGACATGGCACTTAGAGATGTAAAATCTAAACTGACTG
GTAATCGAGTTCTAGTGAAAATGTTTGCGAATGAAGATAAATACTTTCGA
GAATATGACCAGATATACGATGAATGCATGACTAGCTTCCAGTCTAAGTC
GATCACATATTGTTTATACATTGCTGCTCAACAATTGACTGGATTCGTTA
CTTTTGCTGTCAGTATTTACATCTTTTTGGATCATTTGACAGAAACTAAA
CTAACCACAGCTGAAATCACCAGCTTCTTCTTCCTGCTACAAACATTTAG
TGGGAATGTGCGATCCTTTTTCTGGCAAGatgaaaacatcaaagaaaatg
ttcgtCATTTGGATAAATTCATTCGTTTAAAGAATCAAGTTCCTGGTATG
GTTGATGGCGATGAAGTGATTAAAGATTTGAAAggagaaattatttttga
agatgTTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGA
AGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGAC
TCTGGTGCAGATGATACTCGGCGGATCGAAAAGCAAAGTTGATATAAGAA
CCAAAAGCAAAGTCGATTTCCGTTTGAAAAGAGTCGACATCATAGCCCAA
GGATCCATTTCTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTG
CTATGGGCCCGATCGTGGAACAAAATCCAACCGACCAATCATTCTACACG
AGGGAGAATATTTAGTTCGAGTCAGTCATGAACGCCTGTATGATTACGCA
TGCGCTGGAGCATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCA
TTACACCCCTGGTAATTCATGGCGTGGATATGCAACAGGCTGGGAAAGCG
AGACAACAACAGTCAAAGTTGAAGACGGTATGGAAATCATCAGTTTGGTG
ATTAAGCGAGGTATTTTAATCGGTATCGAGCAACAACCAATAGCTGAGGA
AAATAAAGGAcaaactaaacaaaaagaatGGTACGTGAGCTGTTATTCTG
CAGGGAAAGAAGACATAGATCTCAATCATAATAgttcgaaagaaaaaaat
gaagaagttgttttcaaatatttcaacaccaaaaaggAAGCACTGAAACA
TTGGAATGATTTACAGGCGTTGGtggcaaagaaaaaagaaagaggagCCA
TGTTGGTTGATTGCTTATCAGCTAAGGTTCTTAAATCAACTGGTTCAGAT
GACATTGTGGAAAGGTGTAAAAAGGAATCGATCGAGAAAGGTTTTTGTGC
TGAGGATCAACATGATGAATCGATTTTCCAAGTTATCTGGCTCATGTATC
GATCCATTATGACTACCAGGGACATTGTAATCTTCCTCTTAACCATTCTA
TTGAAATCCATTGCCGATCTACTTAGCGTCCACTTACAGTTCGTTAAAGG
AAGCATCCTCGCCCTTTTAGTATCGACCTTCGACTCAGAAACACTAGACA
AGAACAGTTACGTGCGATTCACATGCAATTATTTTTATACTTGTGATACA
GACAAGCCTTTAAGTATCGGGAGAGCTTTACTGATTTCAGGATGCATTAT
CAAACTTGTATCAACGGCAGTAAACATGATTGATATCTATATTGAACAAA
ATTTGAATTCTGGTCGAAAGCTTGAAATGAGAAGGAGTATTTTGAAACAC
GCCATTAGGCTAGATCAAGCATTTTATGATGTCAACTCATCGGGCCATAT
CAACGAATCAATGCAAGTTAATTCCATTCATCGCTTGGCAACAGGGCAGA
TTCCCAGAGTCATACAAACCATTATTTCTATCTTTTTAAACCTGTATTAC
ATTATCAAAATCGATTTCTATCTTGGAGCATTCACCATGTTTGTCACGAC
CTTCAATACAACAGTCTTCGTTAAAAGGTTCCATAATATGCTCAAAAAGT
CATGGAAGTATGAATTAAAATGGGACATGGCACTTAGAGATGTAAAATCT
AAACTGACTGGTAATCGAGTTCTAGTGAAAATGTTTGCGAATGAAGATAA
ATACTTTCGAGAATATGACCAGATATACGATGAATGCATGACTAGCTTCC
AGTCTAAGTCGATCACATATTGTTTATACATTGCTGCTCAACAATTGACT
GGATTCGTTACTTTTGCTGTCAGTATTTACATCTTTTTGGATCATTTGAC
AGAAACTAAACTAACCACAGCTGAAATCACCAGCTTCTTCTTCCTGCTAC
AAACATTTAGTGGGAATGTGCGATCCTTTTTCTGGCAAGatgaaaacatc
aaagaaaatgttcgtCATTTGGATAAATTCATTCGTTTAAAGAATCAAGT
TCCTGGTATGGTTGATGGCGATGAAGTGATTAAAGATTTGAAAggagaaa
ttatttttgaagatgTTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCT
GTTTTGAAGAAGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTAT
CGTTGGTGACTCTGGTGCAGGAAAATCTACCATCGCTAAACTCATCATGA
GAGTTTACGATCCTGATTCTGGTAGAATTACAGTCGATGGTCATGATATG
AAATCATTGAACATTCCCAAGCTTCATAAAGAGATGGGAATTGTTTCTCA
AAGCCCTGGTCTTATTACAGGAACCTTAGAAGAAAACATCGCTTATGGTT
CGATAAAAGACGTTTGCAGCCGCGAAGACGTCGAAAGAGCAGCGCGATTA
ACTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACATATGC
TGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAGAAAATCTACCATCGC
TAAACTCATCATGAGAGTTTACGATCCTGATTCTGGTAGAATTACAGTCG
ATGGTCATGATATGAAATCATTGAACATTCCCAAGCTTCATAAAGAGATG
GGAATTGTTTCTCAAAGCCCTGGTCTTATTACAGGAACCTTAGAAGAAAA
CATCGCTTATGGTTCGATAAAAGACGTTTGCAGCCGCGAAGACGTCGAAA
GAGCAGCGCGATTAACTAAGTGTGATTTCATCGATAAATTTCGTTCAGGC
TATGACACATATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:256557..259162 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1963-2274:2295 |
| Aaloc | 1-1959:1 |
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