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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:260491..261974+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043405 ID=XLOC_043405|Name=XLOC_043405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1484bp|location=Sequence derived from alignment at sc0000367_pilon:260491..261974+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATTCTTCATTGCAATAATGAAGATCTTATTGTTTTTAGTTCTATCTCT
TCTCAGTATATACACTCAGGTAAGCTACCTTTCATTCTTTACGCtttttt
tacccgggggggggggtggtacttaggcaaatggaggtaCGAGTATGTGC
CttccttaagggtgcctttttgggTCTTCAAGCTCCTCTAAGGGTCGTGA
AAATCACAATGTCTAATTTCCGTCCCCCAAAACCAAAAACTCTAatattt
ttccctaaaaaggGTAAATTTTAGGAATATTTTCGGTTTCTTTccttaat
tttaaaattgattgaGAAAAAATCAATATGTTGTTGCTTTCATTTATCTT
TACATTAATTTTAGaccctaaaatttcaatttttttaaattcgggGCGGT
AATATTTTCTCCTAAATATCTTCGTGTACTATTTATGGTCATGGCTTTAG
TCTTTTCTTCTAGGTGGTGCTTGGCGGCAAGACTTGCCAAAGACTTGTTT
CAGCAGCTAAAGTTGGTGGAACCTTTATTTCAAGAAGTGAAACTGTAACG
TAAGTAAATTTCCACACGAAAAGGTAATTATAAGTGTAAAGATATTCTTT
GCATTTGTCACTTGTGtggcatttttttaatgaaccGGAGTTTCCCTTGC
AAAATCTCTAAACGTCAATCTTGTCAAATCTAAAAGCAACAAAGTTACCC
TCTGGACTTTTTCACCACTTTTACATAACCTAGATTTACATTCGTGCATA
TTTTAAAACTTAatccttttatctttttcacAGCTGTCAAAGTTCAGAAG
TATGCTGTGCAAGCGGGTGTTGCAAACCACTCAACATTACTTGGGAGACA
TGGTAAGGAAAGCCCTTGCCCAAGTCCTTAAACAGTTCTTTTTTCTCGAA
TCAAGCCTAAGCTTTGTCATATGAGAAATCTGTAAACAGTAACTGCAATA
ACGACAAAGACTGGTAATTTTCGAGGAGATAAAATAAACATTGTAGATAA
ACATCCGCAAAGCTATCTTTACTGTTACTTTTTGAATAATTTCCTGGATG
AATATTCCTTTGGTTTTTGCATACCTTCAGCACCCTGAATAGTTTTCACG
TTTTGTGAACAAATCTGTGAACAAATTTTGGGAGAAGCAATGCAATCTAT
ATTTAAATATAGTATAGAAGAATCAAGGATAAGTGGAGCAGTCcaaggag
aaagagtggcacgcCTTCCTCTTCCTTTTGctagacagctatcgaaagaa
gaACCTTCGGGTAGCCTCCAACTGCGATCGAAGCCTTCCCAACAGCTAAC
ACCCTGTTTAAACGGTaacttattttgtttatttaggCTTGGTATAGGTA
TCGGTGCATTCATCATTGTGTGTGCTCTGGTTGGCTATTGTTATTGGAAA
CAGAAAAggaaagataaagaaaatccaAAAGCAAACCAATGGCAAACTTT
GAAAGATGAACCACAGATGTTTTACCATATCTGA Coding sequence (CDS) from alignment at sc0000367_pilon:260491..261974+ >XLOC_043405 ID=XLOC_043405|Name=XLOC_043405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000367_pilon:260491..261974+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATTCTTCATTGCAATAATGAAGATCTTATTGTTTTTAGTTCTATCTCT
TCTCAGTATATACACTCAGAAATTCTTCATTGCAATAATGAAGATCTTAT
TGTTTTTAGTTCTATCTCTTCTCAGTATATACACTCAGGTGGTGCTTGGC
GGCAAGACTTGCCAAAGACTTGTTTCAGCAGCTAAAGTTGGTGGAACCTT
TATTTCAAGAAGTGAAACTGTAACGTGGTGCTTGGCGGCAAGACTTGCCA
AAGACTTGTTTCAGCAGCTAAAGTTGGTGGAACCTTTATTTCAAGAAGTG
AAACTGTAACCTGTCAAAGTTCAGAAGTATGCTGTGCAAGCGGGTGTTGC
AAACCACTCAACATTACTTGGGAGACATGCTGTCAAAGTTCAGAAGTATG
CTGTGCAAGCGGGTGTTGCAAACCACTCAACATTACTTGGGAGACATGgC
TTGGTATAGGTATCGGTGCATTCATCATTGTGTGTGCTCTGGTTGGCTAT
TGTTATTGGAAACAGAAAAggaaagataaagaaaatccaAAAGCAAACCA
ATGGCAAACTTTGAAAGATGAACCACAGATGTTTTACCATATCTGAgCTT
GGTATAGGTATCGGTGCATTCATCATTGTGTGTGCTCTGGTTGGCTATTG
TTATTGGAAACAGAAAAggaaagataaagaaaatccaAAAGCAAACCAAT
GGCAAACTTTGAAAGATGAACCACAGATGTTTTACCATATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:260491..261974 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 226-372:1338 |
| Aaloc | 157-222:785 |
| Aaloc | 70-153:464 |
| Aaloc | 1-69:1 |
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