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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:263892..267167+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043403 ID=XLOC_043403|Name=XLOC_043403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3276bp|location=Sequence derived from alignment at sc0000367_pilon:263892..267167+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGCGCCTTcttatttctatttcttcacCTTCCTTGCTCATATTCA
GGTAGGTTGCATCTTTTactttcccgggggggggggtttcacttttacgg
tacgacggtattgggcctttttttcccggtaaatcggtattaccagaaaa
aaacgacgggattacggtatttcattttctaccggtatcggtatttaGGT
AATTAGGCTTCTTTTATCGACGGTactacggtatttgacccaaatctttg
tcggtatgacggtatttaagacccctgaaaccccccccccccttttaccT
TCACTTCTATAATACATCCCCTTATCATAGAATCGGTAGGGAGGAGGATA
AagataacggaccaaaactccatggggattgatattcccatttcTTTTAT
GTGGCTGAGGATTTGAATTcaattgttttcgagccagaaaatgtagtggg
gatgaaaaaaaaaacagcacaatattttgcagtgagggtttgcttatctg
attactTTCagcgcgaaaaaaaaattagcgtATAATTTTcaactggggac
gatatttttgccaatttttccagtgggatggGGTCCCAtgaggtctgtga
gaaggggatgttaaaataatataataaaatataattttttcctttaaatt
agttggacaataaattccgcaaatattttttttctgccGGCATTAATGTG
CAGATTGAACCAGATCCTGGCTAAATACAGGTTAATCATTTTCCTGTTCC
AGATGAACACGACttttttttGACAGATTGCAAAATCTGTTGGGAGTAAT
AATTAGGAATAAGTGGAAAAAGCTCTTTTTGTCGACGGGTCTGCCTCGAT
ACGGGTAGATTTAGGTTTTTCCAGACGACGAGGAGGCCGCTGGCATCCAT
TAACTGACGGTTTTTTGTTCCAACCATCTGTggtattcataatatgcacc
attgcaatgtcttccactgacccaacagctgattggttgaaagtaacgta
TTGACTGGTTTTATGTCACTTACatccaatcagctattgggtcttTGAAG
CGATGTTGAAGAaattgcagtgatgcatatcatgaatagaccaAGTCCAG
TTTATATCTATTTCTCTAGCAAAATGCCTGTCTCCGcccaattctttttt
tttaccaataaaagtgaaatctcactttgtCCCAGGATCAAAATCCGAGT
gtattttgggtatttccctcactttttgtcccatgaaacaaaaaaagaaa
ccatgggatacacacttttttttgtgttggtgAGATAgaacatgttgcat
tgcaccacaAACTTCTCGTGCCCCAAGCCTTGTAAGAAAATCTGCGCCAA
ACAAAGATATCCCATTCCAATGATTCTCGAGACATTAATCAATTTCGTTG
ACACTCTTAAACAATCATTTACAATTCTGTTCCAGGTCAATCTTGGTTTG
AAATGTCCAAAGAGATCGATGCTACCAAATACATCAGATGGCGGAGTCAC
ATATCGTTTGAAATTACACAAACACACTATTGAGTAGGTTACTGCTCTAC
ACAAGtcagtagcgagtttatgtatctgtgtTTATTGAGATGGAGACGGC
AAGCCTCTAATTTGTCTAGATCATAACTGACTacggacgacggtaaatca
gcacttttactgtcCTCGATTTTAGGACTGCGGGCTATTTCAAATCGTTC
TAATCActccaccgtcctcaaaagtgcaaatatataaacTCGCTAGGGCT
GCGTCCTGTACATTATAAAACACTGAGTAGCTTCTGGGCTATCTTGTACC
AAAATCTTTCTTGTTACATAACAAGTCTTTATTCGATTTAATGAACTCTT
TAGCAATGCAAGACAGTTTATAAAAGGTTTATAATTTGAATATTTCCACT
CATTACCCATTTTACTTTAATGCTAATAGCTCTCTATGTGTACTTGTGTC
GTAGTTAGCATCGGCAATAGAAAATACAGTTAACTTTTTATAGTTcgaat
ttctataattcgaagaaaatttttggtgcCTTGAAGATCAAATTAAAGAG
ACTGTACTTTAAATCCTaatacaatcatggttgaaaaatattgagaattc
cggctattttaacgtttttcaagattttaagttccggcgagaaagccgat
tttgggctatctctttaatttaattgaatatttcaatttaggaggggttg
gcagacttccaggctatattctgagccttattatactatttttgaacttt
tggatcctcagatcctaaggtcgtaagtcttaagtctagcgttaaaactg
aGAATTAAAACTCAaaccttcgaacctactttagagcacttacaaatcga
ttgtggtttcaaaacttcccggagaatttctctttttttctcaaataaaa
tgaccttgattgtagttcTATTCATGACCTTGTAAAcatcttcaattttt
cattaGGTGTAGGCCTTCAGAAGAATGTTGCCCGCGAGAAATGGGTTGTT
GCACACCGGAAATTGGTAAAAAAGTATGGTAAGTGATGAAGTGATTTCAG
agccttacaatgttcttaacttgtttttacaatgttcttaacttgttttt
aacattttttccatccaagccttgtgttcttatatagtaagtttttataa
aaaagcgtgtagagcattatttttttcttgtgataaccatttgaaataat
actatgaaaattgaaaatgtaaaatgtcacatgttaaaaaatattgaaaa
aatctgaTATTCATATCCTTCCTATTGCTCTTACAACAAAAGTCTCAAGT
TTATTCAACTCGAAAACATTCTTTATAAGCCTTGTGGTAATTCCGAACTG
TCTCAAAGATTCAAGAAGACCCCCTATCCATTATTTATCCTTTAACTAAG
CCAATCCAAGCCCGGCGGAACAAGCATAAAAGATgtgaggctgaaggctc
aaaatgagataaattaCGCCAGGAATTTGAGAGAAAATCACATTTGCTCC
AAATTGGGAAGGCTGAAGtcccccagtctccccgcttccgccatGCCTGC
AATTCTTGCTTGAAATTGATCATTTCCAGagttgatacaggggtgtaaca
agatcatatttttttttcataggaTCGGTGTAGGACTGGGCGTGGCACTT
GTTATATGCTTATTTATTGTCTATTGTtattggaaaaaaagaaaagatag
aaGAAAACGCGTTGGCGATTTACCGAATTCCgaaacggaagaaaaacgga
ggaaaaagaaaagaacaaaaaagtga Coding sequence (CDS) from alignment at sc0000367_pilon:263892..267167+ >XLOC_043403 ID=XLOC_043403|Name=XLOC_043403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000367_pilon:263892..267167+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGCGCCTTcttatttctatttcttcacCTTCCTTGCTCATATTCA
GATGAGGGCGCCTTcttatttctatttcttcacCTTCCTTGCTCATATTC
AGGTCAATCTTGGTTTGAAATGTCCAAAGAGATCGATGCTACCAAATACA
TCAGATGGCGGAGTCACATATCGTTTGAAATTACACAAACACACTATTGA
GTCAATCTTGGTTTGAAATGTCCAAAGAGATCGATGCTACCAAATACATC
AGATGGCGGAGTCACATATCGTTTGAAATTACACAAACACACTATTGAGT
GTAGGCCTTCAGAAGAATGTTGCCCGCGAGAAATGGGTTGTTGCACACCG
GAAATTGGTAAAAAAGTATGGTGTAGGCCTTCAGAAGAATGTTGCCCGCG
AGAAATGGGTTGTTGCACACCGGAAATTGGTAAAAAAGTATGgaTCGGTG
TAGGACTGGGCGTGGCACTTGTTATATGCTTATTTATTGTCTATTGTtat
tggaaaaaaagaaaagatagaaGAAAACGCGTTGGCGATTTACCGAATTC
CgaaacggaagaaaaacggaggaaaaagaaaagaacaaaaaagtgagaTC
GGTGTAGGACTGGGCGTGGCACTTGTTATATGCTTATTTATTGTCTATTG
TtattggaaaaaaagaaaagatagaaGAAAACGCGTTGGCGATTTACCGA
ATTCCgaaacggaagaaaaacggaggaaaaagaaaagaacaaaaaagtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:263892..267167 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 223-375:3124 |
| Aaloc | 151-219:2458 |
| Aaloc | 52-147:1436 |
| Aaloc | 1-51:1 |
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