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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:1224510..1227031+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043398 ID=XLOC_043398|Name=XLOC_043398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2522bp|location=Sequence derived from alignment at sc0000003_pilon:1224510..1227031+ (Clytia hemisphaerica_ch_hm2_pilon)
TATAGcaataataaaacaatacaaaatacaaaaattcaaatagagagaca
caaaaagcaagaaatGGCATCGTGTGATTGTAAAATTTTGCGTAATATTA
AATCTGGTTATAATGATAAATCTCCACCTAATGATAAACTGATAAAAGAA
TACAAATTCAAGAAACGCTGGCATACACTTGGTTGGAATATCATATGCAG
AAGATGTGCTCTTGATGAAGGGATGGTTAAATCGATATGTCTTGTATTGT
CGTATTACAAAGATGACAAAGAAAAAGACTTGAAAGGTaagatttcattt
taatttagtCTGCggccgcagtcggaggcgacccgaaagctcctctttcg
atagctatcgcCCGAAGGtggcaccactctttctccctggattgctccac
ttacccttgatctttctcttaattgctgagcatcaagcagtgaggcatca
agtaccattttggaaatctttggtttGACTCACAaacttgcgcaccgtag
ccggatgctccgCCACTGCAATACGGTCGCTTAAGTCCTTTTATACTTAT
TTCATTATCTAGATATTAGATGCGTAATTGTATGATTGGGCTTATTTCTG
ACGTGGTGGcgtgatttcaaaaaatgttatccGTGTTGATAAGAAAGTGT
CGGAGTCGTGCTGGAGTGATTAATTCTTCTTTGGTAATGGTGTTAAGGTA
GTGCAGACAACAGGGTCGccaaatttgtgtaggagaggagatttttatga
cacagttattatctttttataatcTGCTCTCCCACACAAATTTTGCGTCC
CCCTTGTCTAAACTACTGCGTTATCAGAGACTCcattaggggggggggct
ttaaACGAGCACGGTAACTTTGTTTATAAAGCCTTAAGCTATGatggaaa
aaatcattttagcaTCACTTTCCTCCACATCCATTAGGGAAATTCATACT
GGAAGATGATGTGGAAATCGAAAGAGTTAGAGTTGTTGATGAAAATccac
aaaaatatcaacaacacAAGAACTTATTGAAATGGCATTTACGCAAAAGA
TACGATCGTTCCTTGTACACTGATCACTATGATGAAAAAGACGCAGAAGC
CTGGTTAAAAGCTTACGAAAACCGCGAGGTAAATACGATGACACTGACAT
ATTTCAGACTGATTTTGTCCAGAAATAAAGCTATTGGAAGCAGTAGCGTT
TTGGGTCAACCAAAATTGGCCCAACTGGGGAGgagatttttcgaaaattg
agaATTCGGCGTCCAATATTAAGAGTGTAATAGATCGGTAACAACGAGGG
CGATTTCCTTCAACCTCATTCCCaacgtattatcagcttttttgtGCCTA
TAAATAGCGCCAGCTAATACTTCTTTTGGGTCAATAAGGAACGtgaataa
agcctgggatacacggggatgAGGTTGGGCAATTTCccccggggacaaaa
tttgagTTGAATCTTCTAGTAGTAATCTGTGACATGGGGGTGgaggcggt
tttagaccctgtcgaacttatcaggggaagagatttgtaatttcattgtc
aattaacgagcgttgcactccttcacATGCTTCCGACCTTCCGacatact
tgctctattgtcttaaatccgccagtgggCGGGTTgtctaaagtaaaaat
aaagtgAGTATAGAGCTTCTTTAAGTTTCTTCTACAAGCCTTTTCCTATT
GTCTTTCATCACAGATGTTGTACCCAGATCTTGATAACCATGAAAAACAA
GGTGGTGATATTTCATCTGATGATGATGAGGATGATCATCTTTTTGTCGA
TCAAACCgttcaaaaacatcaaacaaaTGACAGGTACGTGTTTTACTGAT
AAATGTGTACTGTTgatactctctaattcgattttaaaGTGGGCTGCTCT
GGCATCCGCCAACTGATTTGTACTCCTTATCTACCGGcgattttgtagag
gtctgcgacaCAATTTAGCTTTTGATTTCTCCATAAAAATGGAACCCTCT
ACAGCTTTACGACACCAAGTATAGTGTAGCTCTTACAATTGTAAGGGGAA
CTCGTTTGGGTAGATCTTGTGTTTTATATCATCTAGTAAATCAGTTGGAA
AGTCATAAAGATGATATTTGGGAATAAAAGACAAAGcaacgctttttttt
tattatttcgctttcttATCGACGTCTTTCCTAACTGGGTTTTGTGTTTC
TAGATTAACCCAAGAACTAACACTTTTACGAAACGTACGACATAGTTACG
CACCACCAGATGTCAGCCCTGATTTCGAGGGTGAATTTGACCCTTGTAAA
TACATGGGTACATCAAGTAACAGAAGTTCAGCGTGCAGTTGGAGAAGCAG
TGCAACGAGTAGTGGAGTGTTTTCTGATCGATCTTCAAGTAACGTGTCTT
CTCTATGTGGAGGATTTAATAAGAGCCGTGGAAGTATGGATTTTTCGGAC
TCTTTCAATGAAACTCaagaaattgatgaagaagatgagGAAGAggtgaa
caaaaagaaagatgGCGTTTGA Coding sequence (CDS) from alignment at sc0000003_pilon:1224510..1227031+ >XLOC_043398 ID=XLOC_043398|Name=XLOC_043398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000003_pilon:1224510..1227031+ (Clytia hemisphaerica_ch_hm2_pilon)
TATAGcaataataaaacaatacaaaatacaaaaattcaaatagagagaca
caaaaagcaagaaatGGCATCGTGTGATTGTAAAATTTTGCGTAATATTA
AATCTGGTTATAATGATAAATCTCCACCTAATGATAAACTGATAAAAGAA
TACAAATTCAAGAAACGCTGGCATACACTTGGTTGGAATATCATATGCAG
AAGATGTGCTCTTGATGAAGGGATGGTTAAATCGATATGTCTTGTATTGT
CGTATTACAAAGATGACAAAGAAAAAGACTTGAAAGTATAGcaataataa
aacaatacaaaatacaaaaattcaaatagagagacacaaaaagcaagaaa
tGGCATCGTGTGATTGTAAAATTTTGCGTAATATTAAATCTGGTTATAAT
GATAAATCTCCACCTAATGATAAACTGATAAAAGAATACAAATTCAAGAA
ACGCTGGCATACACTTGGTTGGAATATCATATGCAGAAGATGTGCTCTTG
ATGAAGGGATGGTTAAATCGATATGTCTTGTATTGTCGTATTACAAAGAT
GACAAAGAAAAAGACTTGAAAGGGAAATTCATACTGGAAGATGATGTGGA
AATCGAAAGAGTTAGAGTTGTTGATGAAAATccacaaaaatatcaacaac
acAAGAACTTATTGAAATGGCATTTACGCAAAAGATACGATCGTTCCTTG
TACACTGATCACTATGATGAAAAAGACGCAGAAGCCTGGTTAAAAGCTTA
CGAAAACCGCGAGGGAAATTCATACTGGAAGATGATGTGGAAATCGAAAG
AGTTAGAGTTGTTGATGAAAATccacaaaaatatcaacaacacAAGAACT
TATTGAAATGGCATTTACGCAAAAGATACGATCGTTCCTTGTACACTGAT
CACTATGATGAAAAAGACGCAGAAGCCTGGTTAAAAGCTTACGAAAACCG
CGAGATGTTGTACCCAGATCTTGATAACCATGAAAAACAAGGTGGTGATA
TTTCATCTGATGATGATGAGGATGATCATCTTTTTGTCGATCAAACCgtt
caaaaacatcaaacaaaTGACAGATGTTGTACCCAGATCTTGATAACCAT
GAAAAACAAGGTGGTGATATTTCATCTGATGATGATGAGGATGATCATCT
TTTTGTCGATCAAACCgttcaaaaacatcaaacaaaTGACAGATTAACCC
AAGAACTAACACTTTTACGAAACGTACGACATAGTTACGCACCACCAGAT
GTCAGCCCTGATTTCGAGGGTGAATTTGACCCTTGTAAATACATGGGTAC
ATCAAGTAACAGAAGTTCAGCGTGCAGTTGGAGAAGCAGTGCAACGAGTA
GTGGAGTGTTTTCTGATCGATCTTCAAGTAACGTGTCTTCTCTATGTGGA
GGATTTAATAAGAGCCGTGGAAGTATGGATTTTTCGGACTCTTTCAATGA
AACTCaagaaattgatgaagaagatgagGAAGAggtgaacaaaaagaaag
atgGCGTTTGAATTAACCCAAGAACTAACACTTTTACGAAACGTACGACA
TAGTTACGCACCACCAGATGTCAGCCCTGATTTCGAGGGTGAATTTGACC
CTTGTAAATACATGGGTACATCAAGTAACAGAAGTTCAGCGTGCAGTTGG
AGAAGCAGTGCAACGAGTAGTGGAGTGTTTTCTGATCGATCTTCAAGTAA
CGTGTCTTCTCTATGTGGAGGATTTAATAAGAGCCGTGGAAGTATGGATT
TTTCGGACTCTTTCAATGAAACTCaagaaattgatgaagaagatgagGAA
GAggtgaacaaaaagaaagatgGCGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:1224510..1227031 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 598-915:2205 |
| Aaloc | 478-594:1715 |
| Aaloc | 289-477:940 |
| Aaloc | 1-285:1 |
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