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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:1217772..1220953+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043397 ID=XLOC_043397|Name=XLOC_043397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3182bp|location=Sequence derived from alignment at sc0000003_pilon:1217772..1220953+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTGTGACTGTACAATCATCACCAATTTTGTTGATGGTTATGCTGC
TAAATCACCACCTGTCGAGAAACTACGTCGTGGTTATAGTTTCAAGAAGA
GATATTATACACTTGGGCTGGTTGATATTTGTATGAAATGCTGTAGAAAT
TTGGAGAGTCTGGGAAGGAAATTGGTTTTCTCATATTACATAGATGAAAC
GCAACAACAATTAAAAGGTTAGATCTGATTTTAAAGAAATAgactaattc
gaactcgaacagaATCTCATTTGCTCGAATCTTATCttaaattcgaacaa
attaagaacaatctgagcctcagatttcagaaattactaagaGAAGTACT
AATTCAGACAGATTTTAAAACCCATTTTAAGctttaaaataaagaaacta
agcgtattGAAAACATTgtgtaaaaatattcaagctggaaaatttcagaa
aatttcagaaaattaagaacacaGCCTAGCCTAACCAAAATTTAcgggtt
cttataaaaaaagcgtctAACGAAAATCGAAATCTAAAACTTATTATTAA
TACGTGTACAGTCATTTTTAGAAACTTAAATTGCCTACACCCACGCCTTC
GGTTCAtgcatttttttttatctatcatTTCTTATAATAACGTGGGTTGA
AAAGGTAGGGATCAGAAACTACTATAACAGTTAAACTGtatcaaaaattt
gttcaaacGTTTATATATCAAATCAAGTCAACACGACACGAAAGGATAAT
GAGTTGAAAATTTATCACGATTTTATTATTATTGAGAGTGAGCTAATGGA
TAAATCCGAAAATAATTTTAAGGAGATGCAAGTTTTGTACTTATTAACCC
TTTGGTTAAGCGTAAGGAGACTGGGTTAGGGTTTACCATGAAGGATTGAA
GTCAAAAATCTCAAGTCGTTAAACATTAATTTTCTTACTGACAGTGAATT
TTGTCACCACTCATCTTTGCTAAACTCTGTCAAATCCCTTTTAAAATTGA
tacatgtttttaaaaagaacatccaaaatatttgaagcattgaatgttct
taactttttaacttttagaaatcgggtgttttagagttcgcaatcgaagc
cttatgttcttatatagtttgttcttatatagaaaAACGTGCAAAgttaa
aacagttttttgacTCCTAACAGGTCGATTCGAGGTTGAAAATAGTAAAC
TGGAACGAGTATACGAAATCGAAGAATTACCGAAAAGTTGTTTTGacaga
aaatacattttgaaatGGACGATGAAAACATATGACCGGGTGTTATATTT
GATATGGGATGACGAAGGAGAAGGGAAACAATTGTTGAATGTTTTCAAAG
ATTACAGAGAGGTAAGTGCATAGGGCATTTCACTTAACGACTTACTATAG
GttccaatgttttgaaaattttgaaaccgTTATCGTGACGCAACCAGTTT
TGATTACCTATTATCCATtttgactgtgaaatggcctattaacgctttaa
gtgccaatgtcgtgtATATCGGACATGGGCTAtactgtaatgcccagttt
gagttagaaatcgtcatttttggtataactcgtaggaattggatcgGGCT
tcgtcaagcaaaaaaaaaatcaaaagtgagtctttccggcgagattttaa
gccaaaaagtcaaagaaatgcAAAGCTTTTGACCgttttttagagcattt
tttgtcaacgagtgatccaagaacatccaaatttggccctgatttacttg
attctgtcctctagcgaattaatttgaagttttactactgCGTACTGGGA
ATCatccatcattcagtcaggtctgcgcagcctttaaagtttgaactagc
aattttcttaaaccctttaactgccgttcgtattttttaaggttccaCAG
AGCTTACCATCAcatttagctttattttctgaaaaatatcagaaatataa
CTGTTATGTGTTTACTTTGAGatgaaaaatgtataattatgaaaaacatc
tttgaaatatactttaattattcaactgtgttatttaatgaaatctagtt
caaaatatcaaactttCAATATACTTCaaaaaaaCCTCTGGCAAATACGT
AGGCAGAAGATTCACATTATAGCCCTCAGTATAATTCGTTACGGGTATTC
CCCTTTGAGAAACCAAACTTGCTaaaaaaaTTTGTGTCCTCGAGTTAGAG
AGACCTCACATAAAAAGGGTAAGTACAATCCAGACATAATCTAGAATTTC
ATCTTAAATccattaaataaaataaaagagctCGTTTACATTAACATGCA
AAAACAAACTTTCAGCAACAGCTCTCAGAAATAACATTGCATCCAAAAAT
AATCTGGTTATCATTACCTTGTCATAAAGTTTACTTTATCAAATAGACAT
TACATTACTTCTCTGCTaagtttctaaactttctttgaTGTTAAAAAGGG
AAAGTACACACTTTGAGACCTCTTATAAAGGTataaacattgaaaaataa
caaattaaaaGGACGTTTTGGATTTAAGGGGTTAAAGGTACACCTATGCA
ATAGGAGTAGATTCTATATACGATTGTTTGGAAAAGTAACAACTTGTGgg
caaattttcttttgacaagagttttatttttttttaacttacaactatac
acccctgtctcgcagccccggtgggatatttttcctcagtggggataaaa
atttccatCGAATTTCAATGGGGATAGCAACTCTATTTTCCAAAGATTAA
AAATTcgagtgggatggttttggagtgcaatttcttaaacattgaatttc
aagtggGGTGAAATTTAAGTCAACTTCCCAGTGAGGCTAAAATTtgaggg
tattttcccaccggggatgaaagttttgctaaattttccagtgggactgg
ggtcccagcgggtctgtgacacaggggtgtaactATCCCATATCGAGGAT
AATATAAAGCTGTTTCATCAAATAATAAACAtcaaataaactttttaaat
caCCACCAATAATGATCATACCTAAGGACGTGACCAGGTGAAAAACTGgt
tatatattttctttcatttttccacAATAATTTTAGAATCGAAGAAGAAG
TCGAAGCAGACAATCAAGTGATACGTCAGAGGCTTCAAGTCACGGTGGAA
GTTCAAGACACAGCTCAAATGGTTCAAGATAA Coding sequence (CDS) from alignment at sc0000003_pilon:1217772..1220953+ >XLOC_043397 ID=XLOC_043397|Name=XLOC_043397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000003_pilon:1217772..1220953+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTGTGACTGTACAATCATCACCAATTTTGTTGATGGTTATGCTGC
TAAATCACCACCTGTCGAGAAACTACGTCGTGGTTATAGTTTCAAGAAGA
GATATTATACACTTGGGCTGGTTGATATTTGTATGAAATGCTGTAGAAAT
TTGGAGAGTCTGGGAAGGAAATTGGTTTTCTCATATTACATAGATGAAAC
GCAACAACAATTAAAAGATGAATTGTGACTGTACAATCATCACCAATTTT
GTTGATGGTTATGCTGCTAAATCACCACCTGTCGAGAAACTACGTCGTGG
TTATAGTTTCAAGAAGAGATATTATACACTTGGGCTGGTTGATATTTGTA
TGAAATGCTGTAGAAATTTGGAGAGTCTGGGAAGGAAATTGGTTTTCTCA
TATTACATAGATGAAACGCAACAACAATTAAAAGGTCGATTCGAGGTTGA
AAATAGTAAACTGGAACGAGTATACGAAATCGAAGAATTACCGAAAAGTT
GTTTTGacagaaaatacattttgaaatGGACGATGAAAACATATGACCGG
GTGTTATATTTGATATGGGATGACGAAGGAGAAGGGAAACAATTGTTGAA
TGTTTTCAAAGATTACAGAGAGGTCGATTCGAGGTTGAAAATAGTAAACT
GGAACGAGTATACGAAATCGAAGAATTACCGAAAAGTTGTTTTGacagaa
aatacattttgaaatGGACGATGAAAACATATGACCGGGTGTTATATTTG
ATATGGGATGACGAAGGAGAAGGGAAACAATTGTTGAATGTTTTCAAAGA
TTACAGAGAGAATCGAAGAAGAAGTCGAAGCAGACAATCAAGTGATACGT
CAGAGGCTTCAAGTCACGGTGGAAGTTCAAGACACAGCTCAAATGGTTCA
AGATAAAATCGAAGAAGAAGTCGAAGCAGACAATCAAGTGATACGTCAGA
GGCTTCAAGTCACGGTGGAAGTTCAAGACACAGCTCAAATGGTTCAAGAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:1217772..1220953 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-501:3087 |
| Aaloc | 220-405:1176 |
| Aaloc | 1-216:1 |
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