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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000367_pilon:244287..247267- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043393 ID=XLOC_043393|Name=XLOC_043393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2981bp|location=Sequence derived from alignment at sc0000367_pilon:244287..247267- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCTTGGTGGATCCAGAACTAAAGCTGACATCAAAACAAAGAACAA
AGCTGATTTCCGTTTGAAAAGGGTCGACATTACGACTCAGGAGTCTATTT
CTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCC
GATCGTGGAACAAAATCCAATCGACCAATCATTCTACACGAGGGAGAATA
TTTAGTTCGAGTCAGCCATGAACGGCTGTATGATTACGCATGCGCTGGAG
CATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCT
GGTAATTCATGGCGTGGATATGCAACAGGTTGGGAAAGCGAGACAACAAC
AGTCAAAGTTGAAAACGGTATGGAAATCATCAGTTTGGTGATCAAGCGAG
GCATTTTAATCGGTGTCGAGCAACAACCAATAGCTGAGGGAAATGAAGGA
CAAACTAAACAAAAAGAATGGTACGTGAGTTGTTATTCTGCAGGGAAAGA
AGACATAGATCTCAATCATTATGATTCGAAAGAAAAAAATGAAGAAGTTA
TTTTCAAACATTTCAACACCAAAAAGGAAGCACTGAAACATTGGAATGAA
CTACAAACATTGGTGACAAAGAAAAAAGAAAGAGGAGCCATGCTGGTTGA
TTGTTTATCAGTTAAGATCGTCAAACAGGCAGGATCGGAAGAGATTGTCA
AGACATGCAAAGAAAAAGCAATGGAGAAAGGATTCTACTCGAAGGATGAA
TCCAACCAATCTATCTTCAAAATGATTTGGTTAATGTATTGCACCATAAT
GGATACTAGAGATATTTTCTTCTTCATCCTTAGCATTTTACTGAAATCAT
TGAATAATCTTCTCGATGTTCATTTGCAGTTCATTAAAGGCAGTATCTTG
GCTTTACTGGTATCGACTTTCAACTCAGGACCACTTGAAGGTGACATTTA
TGTGAAATTGACATGTGATTATGTTTATGATTGTGATTCTGAAGACCCAT
TGAGTGTTGGTAGAGCCCTCTTACTTGCTGGATGTATCTTGAAATTTGCA
TCTATCTTATTGGAGATTGGTGAGCTTTATATTGAGGAGAATTTAAACTC
ATGTCGTAAACTGCAGATGAAAAGGAACATTCTGGAGCATGTGAGCAAAT
TAGATCAAGCATTTTATGATATCCATTCAACCAGCCACGTCACTGAATCG
ATGAGTATTGAATCGATATATCATCTGGCGACAGAATCGATTCCCAACAT
GATTCAAACGGTTATAACCATCCTGTTGAACCTATTCTACATCATTAAGA
TTGATCTCTACTTGGGTGGTTTCACAGTTTTCATCTCCACATTCAACACC
ACTTTCATTGTCCGTAAATTCATCACAAAACTCCAGAAATCTTATAAATT
TGAATGGAAATGGGATTCAGCGTTAAGTGATATTAAATCGAAATTCACTT
ATAATTTGAAAACAACAAAAATGTTTTCATCTGAAGGTAAACATTTGAAT
GAATATGACCAAGTGAACAATGAATGTGTATCAAGTCTGGAATCCAAAAC
TGTGGTTCTCTGCTTTTATGTCATTTTCCAAGAGATGACTGGATTTATCG
CTTTCGCTTTCAGCATATATGTCTTCTTAGGACATTTAAAAGAAGCAAAA
CTAACGTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGCAAACTTTCAG
TAGTCACTTTAATTGGTTTTTCTCCCAAGATGAGTATATTCGACAGGATA
TCAGAGACTTAGATAAATTCATTCGTTTGAAGAATCAAGTTCCTGGTATG
GTTGATGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAATTATTTTTGA
AGATGTTAATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGA
AGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGAC
TCTGGTGCAGGTAAGCTTTCAACCAAAAATCACTTTTTATTTTAACGTTG
CCCTCAATTTCAATCAAGCTTGAACCTTGTCTCTCAGTAACTCATTGGTT
TAAAATAAAACTGATCAAAATTACCAACTTTTTTCTAATCAACAGGTCCT
TGAATTAAGTTATTATGTATATCTCTATAGATAGCTACTGGATCAAATGT
ACCCAAGATTGCAGTAACTTACCTTGTCTATGAAAAATCAGGCACAACGT
GCACTGGGTTTTCAAAATAGCTTTAGAAACAACCAAGAATGGATACTCGT
GCCAGAGTTTAAATTTTTCCCTCATTCCTGTGTAACTATTTGATTATATC
TACTTATATATCTACTATTTTCTAGGTAAATCAACTATTGGCAATTTGAT
CATGCGATTATACGATCCAACCTCTGGGAAGATTACAGTCGATGGTCGAG
ATATGAAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGCATCGTA
ACACAAAACCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGTA
TGGTTCAGTCGAAGACTTTTGCAGTCGCGAAGACGTCGAGAGAGCTGCCC
AGCTAGCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACA
TATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGATT
GGCCATTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTGGATG
AAGCAACTTCTTCATTAGATGCTAAAAATGAAAAAGAAGTTCAAGAAGCT
CTTGAGAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTTT
GAGCACCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACAA
TTGTTGAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTACTTAT
TTTGATTTGATTTCCAAACAATTGGTTTCTGCAGAACAAACGAAAACAAG
TGATGAATCAGATAAGCACGAAAGTGGTTAG Coding sequence (CDS) from alignment at sc0000367_pilon:244287..247267- >XLOC_043393 ID=XLOC_043393|Name=XLOC_043393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5232bp|location=Sequence derived from alignment at sc0000367_pilon:244287..247267- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCTTGGTGGATCCAGAACTAAAGCTGACATCAAAACAAAGAACAA
AGCTGATTTCCGTTTGAAAAGGGTCGACATTACGACTCAGGAGTCTATTT
CTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTGCTATGGGCCC
GATCGTGGAACAAAATCCAATCGACCAATCATTCTACACGAGGGAGAATA
TTTAGTTCGAGTCAGCCATGAACGGCTGTATGATTACGCATGCGCTGGAG
CATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCATTACACCCCT
GGTAATTCATGGCGTGGATATGCAACAGGTTGGGAAAGCGAGACAACAAC
AGTCAAAGTTGAAAACGGTATGGAAATCATCAGTTTGGTGATCAAGCGAG
GCATTTTAATCGGTGTCGAGCAACAACCAATAGCTGAGGGAAATGAAGGA
CAAACTAAACAAAAAGAATGGTACGTGAGTTGTTATTCTGCAGGGAAAGA
AGACATAGATCTCAATCATTATGATTCGAAAGAAAAAAATGAAGAAGTTA
TTTTCAAACATTTCAACACCAAAAAGGAAGCACTGAAACATTGGAATGAA
CTACAAACATTGGTGACAAAGAAAAAAGAAAGAGGAGCCATGCTGGTTGA
TTGTTTATCAGTTAAGATCGTCAAACAGGCAGGATCGGAAGAGATTGTCA
AGACATGCAAAGAAAAAGCAATGGAGAAAGGATTCTACTCGAAGGATGAA
TCCAACCAATCTATCTTCAAAATGATTTGGTTAATGTATTGCACCATAAT
GGATACTAGAGATATTTTCTTCTTCATCCTTAGCATTTTACTGAAATCAT
TGAATAATCTTCTCGATGTTCATTTGCAGTTCATTAAAGGCAGTATCTTG
GCTTTACTGGTATCGACTTTCAACTCAGGACCACTTGAAGGTGACATTTA
TGTGAAATTGACATGTGATTATGTTTATGATTGTGATTCTGAAGACCCAT
TGAGTGTTGGTAGAGCCCTCTTACTTGCTGGATGTATCTTGAAATTTGCA
TCTATCTTATTGGAGATTGGTGAGCTTTATATTGAGGAGAATTTAAACTC
ATGTCGTAAACTGCAGATGAAAAGGAACATTCTGGAGCATGTGAGCAAAT
TAGATCAAGCATTTTATGATATCCATTCAACCAGCCACGTCACTGAATCG
ATGAGTATTGAATCGATATATCATCTGGCGACAGAATCGATTCCCAACAT
GATTCAAACGGTTATAACCATCCTGTTGAACCTATTCTACATCATTAAGA
TTGATCTCTACTTGGGTGGTTTCACAGTTTTCATCTCCACATTCAACACC
ACTTTCATTGTCCGTAAATTCATCACAAAACTCCAGAAATCTTATAAATT
TGAATGGAAATGGGATTCAGCGTTAAGTGATATTAAATCGAAATTCACTT
ATAATTTGAAAACAACAAAAATGTTTTCATCTGAAGGTAAACATTTGAAT
GAATATGACCAAGTGAACAATGAATGTGTATCAAGTCTGGAATCCAAAAC
TGTGGTTCTCTGCTTTTATGTCATTTTCCAAGAGATGACTGGATTTATCG
CTTTCGCTTTCAGCATATATGTCTTCTTAGGACATTTAAAAGAAGCAAAA
CTAACGTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGCAAACTTTCAG
TAGTCACTTTAATTGGTTTTTCTCCCAAGATGAGTATATTCGACAGGATA
TCAGAGACTTAGATAAATTCATTCGTTTGAAGAATCAAGTTCCTGGTATG
GTTGATGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAATTATTTTTGA
AGATGTTAATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGA
AGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGAC
TCTGGTGCAGATGTTGCTTGGTGGATCCAGAACTAAAGCTGACATCAAAA
CAAAGAACAAAGCTGATTTCCGTTTGAAAAGGGTCGACATTACGACTCAG
GAGTCTATTTCTCAAATCAAGTTTACATACGATGATGAGAGTATTTGGTG
CTATGGGCCCGATCGTGGAACAAAATCCAATCGACCAATCATTCTACACG
AGGGAGAATATTTAGTTCGAGTCAGCCATGAACGGCTGTATGATTACGCA
TGCGCTGGAGCATTGGTTGAGTTCGAAACAAACAAAGGGCGTGTGTTTCA
TTACACCCCTGGTAATTCATGGCGTGGATATGCAACAGGTTGGGAAAGCG
AGACAACAACAGTCAAAGTTGAAAACGGTATGGAAATCATCAGTTTGGTG
ATCAAGCGAGGCATTTTAATCGGTGTCGAGCAACAACCAATAGCTGAGGG
AAATGAAGGACAAACTAAACAAAAAGAATGGTACGTGAGTTGTTATTCTG
CAGGGAAAGAAGACATAGATCTCAATCATTATGATTCGAAAGAAAAAAAT
GAAGAAGTTATTTTCAAACATTTCAACACCAAAAAGGAAGCACTGAAACA
TTGGAATGAACTACAAACATTGGTGACAAAGAAAAAAGAAAGAGGAGCCA
TGCTGGTTGATTGTTTATCAGTTAAGATCGTCAAACAGGCAGGATCGGAA
GAGATTGTCAAGACATGCAAAGAAAAAGCAATGGAGAAAGGATTCTACTC
GAAGGATGAATCCAACCAATCTATCTTCAAAATGATTTGGTTAATGTATT
GCACCATAATGGATACTAGAGATATTTTCTTCTTCATCCTTAGCATTTTA
CTGAAATCATTGAATAATCTTCTCGATGTTCATTTGCAGTTCATTAAAGG
CAGTATCTTGGCTTTACTGGTATCGACTTTCAACTCAGGACCACTTGAAG
GTGACATTTATGTGAAATTGACATGTGATTATGTTTATGATTGTGATTCT
GAAGACCCATTGAGTGTTGGTAGAGCCCTCTTACTTGCTGGATGTATCTT
GAAATTTGCATCTATCTTATTGGAGATTGGTGAGCTTTATATTGAGGAGA
ATTTAAACTCATGTCGTAAACTGCAGATGAAAAGGAACATTCTGGAGCAT
GTGAGCAAATTAGATCAAGCATTTTATGATATCCATTCAACCAGCCACGT
CACTGAATCGATGAGTATTGAATCGATATATCATCTGGCGACAGAATCGA
TTCCCAACATGATTCAAACGGTTATAACCATCCTGTTGAACCTATTCTAC
ATCATTAAGATTGATCTCTACTTGGGTGGTTTCACAGTTTTCATCTCCAC
ATTCAACACCACTTTCATTGTCCGTAAATTCATCACAAAACTCCAGAAAT
CTTATAAATTTGAATGGAAATGGGATTCAGCGTTAAGTGATATTAAATCG
AAATTCACTTATAATTTGAAAACAACAAAAATGTTTTCATCTGAAGGTAA
ACATTTGAATGAATATGACCAAGTGAACAATGAATGTGTATCAAGTCTGG
AATCCAAAACTGTGGTTCTCTGCTTTTATGTCATTTTCCAAGAGATGACT
GGATTTATCGCTTTCGCTTTCAGCATATATGTCTTCTTAGGACATTTAAA
AGAAGCAAAACTAACGTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGC
AAACTTTCAGTAGTCACTTTAATTGGTTTTTCTCCCAAGATGAGTATATT
CGACAGGATATCAGAGACTTAGATAAATTCATTCGTTTGAAGAATCAAGT
TCCTGGTATGGTTGATGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAA
TTATTTTTGAAGATGTTAATTTCTCCTACCCTTCTCGTCCTTTGGAACCT
GTTTTGAAGAAGTTCAATCTGAAAATACAACCCAATAAGATGACAGCTAT
CGTTGGTGACTCTGGTGCAGGTAAATCAACTATTGGCAATTTGATCATGC
GATTATACGATCCAACCTCTGGGAAGATTACAGTCGATGGTCGAGATATG
AAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGCATCGTAACACA
AAACCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGTATGGTT
CAGTCGAAGACTTTTGCAGTCGCGAAGACGTCGAGAGAGCTGCCCAGCTA
GCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACATATGC
TGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGATTGGCCA
TTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTGGATGAAGCA
ACTTCTTCATTAGATGCTAAAAATGAAAAAGAAGTTCAAGAAGCTCTTGA
GAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTTTGAGCA
CCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACAATTGTT
GAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTACTTATTTTGA
TTTGATTTCCAAACAATTGGTTTCTGCAGAACAAACGAAAACAAGTGATG
AATCAGATAAGCACGAAAGTGGTTAGGTAAATCAACTATTGGCAATTTGA
TCATGCGATTATACGATCCAACCTCTGGGAAGATTACAGTCGATGGTCGA
GATATGAAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGCATCGT
AACACAAAACCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGT
ATGGTTCAGTCGAAGACTTTTGCAGTCGCGAAGACGTCGAGAGAGCTGCC
CAGCTAGCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACAC
ATATGCTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGAT
TGGCCATTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTGGAT
GAAGCAACTTCTTCATTAGATGCTAAAAATGAAAAAGAAGTTCAAGAAGC
TCTTGAGAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTT
TGAGCACCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACA
ATTGTTGAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTACTTA
TTTTGATTTGATTTCCAAACAATTGGTTTCTGCAGAACAAACGAAAACAA
GTGATGAATCAGATAAGCACGAAAGTGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000367_pilon | genome | sc0000367_pilon:244287..247267 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1963-2616:655 |
| Aaloc | 1-1959:2982 |
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