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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000046_pilon:1446051..1453971+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043365 ID=XLOC_043365|Name=XLOC_043365|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7921bp|location=Sequence derived from alignment at sc0000046_pilon:1446051..1453971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTCCCAATACATTCAAgatgaaagttttaatttgcGTTTTCTT
GACAATCGGTGCGACGTGGGCATGGAACGAACATATGGAAGGTATTCTTT
ATTTATAAAATAGGGCACAGCCAATAAACATCTTCTGATGTATTTGAAAT
GCTACTTGAATATACAAACTTAAAGGTGAAGCAAATCTTTTGCTTGTGAG
TTTTTCGTAGTGAATACCCTTGTGCCACAGACACCGGAAAGATTGAcaga
aatttcgtccccggtgggaaaataccttagaatttcacccccattcgaaa
ttcgatgtttaaaaattgcacttcaaaaccatcgcCACTGAATTTTTTAC
CCTTGGAACAAGGGAATTTCTATcaccattgggattttgataggaatttt
tatccccactgagaaaaagaATTCCActgggctgtgagacagaggtgtta
GTAAGTTTTGGTTGAATTATCTCTTAACCTAAAATACTAAGTTGTCGTCA
CTTCTTAGCATTTGCTCACCGACCACGATGATTATGTGAATGTAGCGTAT
CTAAGATTTATTTTTACTTCTGTTACTTATAGACGCGGGCCTCTATGAGG
GTGATATCAAATTATCTTACAAGCAACTTTTGTTTGGTTCCATCAGAGGA
AAACGTTGGACTAACAACATCGTCCCATATGTTGTACATTCAACTCTTGG
TAAGAACAATGCATTATAAATTATTACCAAGCATGACGATTAGTGTTTAT
ACTGTCAAAAACCTATATCAATCCGAAAAATTAGTTGAATAAGATTTTCT
AGCATTCGAGTTTATtttccgaagggctagaggggGCAAAGGAGATTATC
CAACCTTTCataacctttctttttatccaGGATGTGTTTTCCACAACCCT
AGCGtttttttgctaatagctcattgacaattttttttgacactCTGAAA
CTAATCTTATAAGTGTTATTACTACATTGTACACCCACTAGACCAGGTTT
TATGACTAGGCATGCCTTAAAAAGTCTGTAAAATCCCGAAACAAAACTGA
tcacgtcatcaaaaatgacgttattattttttgaaatatttactcatttt
ttcagcatagattttagcAGAGTTAAATTATGCGACAACTTAGTGCTATG
CAcccattggaaagatattagtgagttgaacaatttgaaatActaaaaat
gaaGATGaaaataaagaagaaaaaaatgaagatcttgtaaaaaaatgcta
taactatcattttcactgaagtcaatccttgatcatcgaacgtcattact
gtgaaataaattttcaaaaataatcattcagtcaaaagatatcaaacaca
gttataagctaattgacgtctaaaatcgctgttttctgctgttttctgct
gtttttttggggtcaatcacttatcaactttgtatcataactttatattg
aaaaaatattttagcaaaatattataggttataggtaaaagaaaataGAG
TGCActcttatcgtgaacagactttaaatcCAAAATCTTTTGTTGctgat
ttgaaaaactttcttatCATCTTGAAATAATGAAATACTCTTGCATGTAG
CCAGCCGTGAGAATGTGATCAATGATGCCATTGGTGTTTACCACAAAAGA
ACATGTTTGAAATTCGTTAAACGCACCAATCAACCAAATTATATTGAATT
CTTCCAAGGCTCTGGGTGAATATCTTTTATAAATACAAGTTTACCATTAC
CTTAACCCATTAATCAGTAGCGTTCTCAGGGGTGTcggaaaatttgtgta
ggaggaGAGCACAATTTTGTTACGAATCAAttatctgctctcctacacaa
attttccgACACCCCTGTGAACGCTACTGGATTTACATAAGGCAAGAAGT
ATCATAGAATTAAAATAACAAGCCAAAATATATTTGGTTCCTCAAAGCAT
TCTCACAATTTTGAGACTTTTAGTCAAAAATCTCTCGCAAGGATCTCTTA
GCCTCTTGCTTTCTTGATCTTTGACCACCATTAGTTACACTATtatattc
aatattttgaaaatagatgCTGGTCATTTGTCGGTATGAATGGAGGAAAA
CAACAAATCAGTCTTGGTCCTGGGTGTCTCTGGACAGCCACAGCTCAACA
CGAAATCGGACATGCTATTGGTAGATTAATCTCTTttatacattttattc
aaaaactgtACGTCATGAAGAGTCTGTAAATTATAAGTATTCGCAACCTT
CTAGCGGATTATAATACAAACtcataccctgagtatcagaggttgagttt
tcaaagaataaaccaacctctgaagaccaataatagaaattgaaagtgag
tttctttcgaaggaaatattttacatgatccccaaatgtataacagttaT
TACTAAACTATCAATAATGGAAACTTTGGTTACttcaattgaatcgaaat
aatagacagacttaatgttatgattctctatcactgactctttttaaaaa
gcattgattacatttttgagttgtgttttcaatgaCGGGAATaagaaata
tcaactttgaacttaatccaagatcttggattgtcgtcatggttactttt
ctctgcgttgattgtgCGCTGAATaaaatctggattggtcggcacaggtc
gataTACGATTTCGGCCTGTCtgcttttcacggtaacaaactcacaaaaa
aaagaaaaaatatcaacacgAAAGTGAAGATGCCTagaagaatttgataa
aaaattaccattttattctttttaggTCTTCAACATGAACAAACCAGACC
AGACAGAAATCAATATGTCAAAATTCATCTTAACAACCTCAACGATCAAG
GTAAGTCGGCGTTCTTTTAAATTTGTCCTCAGGCCCTTAGTTTAACTCGG
TGAAGATTTTAAATCTTCAGCTAAATCAATGATATGGAAGTATTCATGGC
GTTCTTTTAGGGGGCAGTGAGGCAACACCCCCCAGCAGAGCTTTTTTAGG
CGCGCAGAACAGCAAGGGAAGAACATATTTAATCAGTTCTTTGCTAATCA
GTGCTCTCTCATAGACACTGATAGTGTTTTACCGCATCAAAAATATGTAA
CTAATCTTAGAATAAACAATATCGCTCTTGATGAAGCCAAAATCTTAGCC
CTCATTCGCGCACTTACGACTAACAAAGCTCATGGTTGGGATGACATCTC
CATACAGATGATTAAAATCTGTGATGAATCCTTGGTTAAACCTCTTATGA
AGATCTATCaatattctttagatttttgcatttttccatCAAACTGGAAA
AGAGCAAATGTTGTTCCTGTGTACAAAAACAAAGGGGACAAGAgcgtggt
aaaaaattatagaccagtgtctcttctgcctatttttggaaaaatctttg
aaaaatgcatctttgactccgtctacacctatttcgaaaacaacaatctt
ttcaCAAATTCCCAGTCTGGTTTCCGCAAGGGTGACTCTTGTGTGTCTCA
GCTGTTATCCATAACACACACAACATCCTGaatggttttgatgttgatcc
aCCCCTAGATACTCGTGGAGTGTtccttgatatttccaaagcttttgaca
gagtttggcacgatggtttaattttcaaacttaagtcatatgGTGTTTCT
GGCTCCCTTCTTTTATTAATCCAGAATTTTCTACACGGGAGACGGCAGTG
GGTTGTTCTTGATGgtcaagcttctgattggacgGAAGTCTTGGCAGGTG
TACCTCAGGGATCTATTCTcggacccctcttttttttgatttacattaat
gacctccctgaaggaatcatttccatgatcaaaatttttgctgatgactc
atCCTTGTTTTCGCTTATCCTAGACCATATTCGCTGTTCTCAAGAACtga
acagtgacatgcagaagataagtgagtgggctcatcaatggaaaatgtcc
ttcaaccctgatccttctaaacaggcaGTTGAAGTGTACTTTACTCGGAG
GTTAAATCCAGCTGACCcccagaaattattttcaataatgcagccattgc
aattcaggatcatcaaaaacatcttggtctcatacttgatcaaaagctgg
tctttgaccgtcaccttgttgaaaaaataaaaaaagctaatcaaggtatt
ggtcttattcgcagacttcgtaagtttctacccagggaatctcttgtcac
tatatacaaaaccaatgttagaccacacctagattatggagatatcgtat
atgatcgtcctggtaattctacattttctgaaaaacttgagtctgttcaa
tatgatgcCTGTCTTGCAATTACTGGatgcttcagaggaacatccagaga
aaaaatataccttgaaaAGCCTGGCAGACAGACGGTTAATTAgaagactc
gtatttttttataaaataatcaatggctttgctcctgcttatcttacgaa
tattcttcctccccagagaggagaggaagaacgcaatgcagggcgaagga
taaaaccaccactcgaggcacctttctgtagaaccgagcgttatcgtgcc
tcattctttcctttttgcacaaatgaatggaataacctcggagatcatat
acggaatcttcccactattaagtctttcaagcaagcaattctccgatttc
tcagacccagtgctaactcaattttcagagttagtgacaacgatggtgtt
gttctccttaaccgattaagggttggtttcagtcatcttcgtgagcataa
gttcaggcataattttgcagacacagttgaccccttctgcaactgtcgac
aaaattcagtagaaacaacacagcattttttgatgcattgctctgattac
tctaatgacagacttgtgatgtttgacagccttcttcaacttgacataac
cttgtttccatttaatcccaaaacattgtgtaaaatacttctttatggcg
accccgattttagcattgtccaaaatcacgatatattgagtataacaata
aaatttatccgtgatacaagccgttttgggggaccgttattttagtcttt
tactctaactgctctccaagctcttttttgtttttgttttttattttttg
ttagtatgtatcctctgtagtaagttttttttttccatgcatttatcaat
tgatttattaatttattgttagcttagtttgggttccttcctcctggcgg
tatgatctggtggtccttttgcgggaggtcaggaacccttagttttgtac
tatttgttcgtgtttcATATACaatagataaaagaaaaaaaaaaaaaaaa
aaaaaaaaaaacagcaaggggcaccaaaagaattttttctgaAGCACCCT
ATTCTTTGAAAATCGAACTCTacaatcaaattcaattctATTTTTTATGT
AGTTGTTGTCTAAGAAACTGCTGGGATGGGGACACCATATTGAAATCTAA
GGGGcgcgatttggaaaaaaataatattggcCCCTGCAGAATATTTTCCC
CAGAAGGTCACTAAATTGCTCTGGGTGCTAGAGTCACACTCGTTCATTTT
AAGCTTTTGCTTTTTAGACAACGCTTATAATTTCCATCTGAATAGAGACA
TTGATTCCTTGGGAACTCCTTACGATTTCTATTCAATGATGCATTATGGG
TGAGTGtttaagagttttttttattctattatTTCACATACAACCTTATG
CTTCCTATGCAACCTAAAGCTTTCATAATCTTGAATGTGTTAAAATTTGT
TGTATGTgaagtaaaattttattattttcaaagacattttgtCGTTCGTG
ATGAACTGATTCCAAATAGATTAatggcaaaatcaatttttgagttttat
attgttttccctgaaagtgaaaaattcaaaaatttcataaattctgaCGA
TACTACTGCAATGAattacgaattttttttttgaaaggtttatttttaag
caatcGAGATTCCCTGCGGATATTATTCTTTTTAAGCCATTCATTCGAAA
TAATTACCCATGAGGTAGCCAGACTAATTGTTGTGCCCATAAGGGTTTCC
CATTGGTTCGACGCAAAGACAGCCAAGATGTTTATGCCAACAGAAAGTAG
CTAAAAGAGCGTAGTTGTCCTCATGATTACCCTTAATTCTTTTCGACTAT
GACAGTGAAATGCATATCCGGATAAACCATGTACATAGTTAACCCTTTGT
TGATATTCAATCCAATGAAATGTGATTTCAATGAAATTTAGATCGACAGC
ATTTGCAAAGAgtggtaccaaaaccatcacAACTTTGGATCCATCCAAAC
AACGAATTATTGACAACAACTACCATTATGGAATGAGTGATATCGATGCT
AAACAAATCAAACTCATGTACAACTGCGATGGTTTGTAGTAAAGATTTTG
ATGTTTCTTCGCATACTTAAGCgagtttgtgtttttttttgcgaCGGAGA
CTGTTAGCTTCTAATGTTTCTTTTCTGATATTCCGAAGCTGGATTGGCGG
CtacccacgctaaagctctaaagtcTTTCAAAGGGGTAAACAAACCATTA
AAAAACTGActctctgtaagggtccaaaaatcacaaaattataaATTTCC
TACCTCAAAGGAttgtgattttccaaaatttggacaaaaatcgagtAAAA
AATCGACAAAGGATTTGAGAACAGTTTCTTTAATGGTCCCAAAAACACTA
ATTTTTCCTCTATCTTGGCTCGGACAAATTATTACCTCAGGGGTAaatct
cggacgggaattttgaTACACTATGATTACATAGTGAATAACAGATTAAG
ATTATAAAGGAGGAATTATCAAGTTAAATTCAAAGgtgaaaattgcaaat
tttttttcatttaggtAATGGTGGTAATAATAACAATGGAGATCTCAAAA
ATGACGGTGAGAGATTTTATAGTAGAGCACATACTTAGCACCCCTGACAT
CTTCTATGTGACGCAACCAAGCCTGGTCCAGTTTAAAGAATGAAGTGCTT
GAACAGTTTTTCACATAGGAGGTTTTCTGCTAAAGTCtaggaaatctttt
aaaacccAAAAACTGACATCACAGGCAAAACCTCTTGACTCtaagaattt
gaagaaattccAAAGTCAATAAAACCAAAGCCACTTATACCAATCGTAAG
CAGTCaaaaaaagctatttagaggatttttgaaaaaaaaaacacttactg
CAATGCCAATCTGATTCAGGTATGACATAATGACCTTTATAAGCAGCTAC
CACTACACAAGATCTTTATTCCTTAATGACACCTCATtgtaagaaaatca
aattttaccaCTGTCTTGAAAGGCTACTCAGTGCTCAatttaaagattga
aaattatgcatgtctttcaattttcaaccaGGCGAGAATTGTTACTACAA
ATGTGGACACAAAGGTGGATCATGCCCACAATATTGTGGTCGAACTGGAT
TGTGTTGTCGAGTTGGTTACAATGATCCCGGTTGTGAACAAGCATCAAAA
CCATGCTACTCTTATCACTGTTGTACTGCACCAAAGAAAGAAGTCAAGAA
TATTGGTAAGAATAGCGCTTCGCAACGCATACGttataattattactttt
cactttttttttttacatttttacgaGTTgtaatcccacaattcaatgca
GCTCAATTGAAGATAGCAAATCTTTTTTAGCTTTCATAGTCCCAAGAAAG
GGAGTGTTTTATGGATAATCCTTGTTAATGGAatgttttttgaagaattt
tatttatttttcataggCAAAAATTGTTGGTATGATTGCTCATACAAAGG
AGGATCTTGTTCATCAGGATTTTGTGGAAAAGATGGTATTTGCTGCAGGA
AAGGATACAACGATAAAGGTTGTGAAAATGCTCAAGCTGCTTGTGATGGA
AAACATTGCTGTACTGcataa Coding sequence (CDS) from alignment at sc0000046_pilon:1446051..1453971+ >XLOC_043365 ID=XLOC_043365|Name=XLOC_043365|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000046_pilon:1446051..1453971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTCCCAATACATTCAAgatgaaagttttaatttgcGTTTTCTT
GACAATCGGTGCGACGTGGGCATGGAACGAACATATGGAAGATGAAATTT
CCCAATACATTCAAgatgaaagttttaatttgcGTTTTCTTGACAATCGG
TGCGACGTGGGCATGGAACGAACATATGGAAGACGCGGGCCTCTATGAGG
GTGATATCAAATTATCTTACAAGCAACTTTTGTTTGGTTCCATCAGAGGA
AAACGTTGGACTAACAACATCGTCCCATATGTTGTACATTCAACTCTTGA
CGCGGGCCTCTATGAGGGTGATATCAAATTATCTTACAAGCAACTTTTGT
TTGGTTCCATCAGAGGAAAACGTTGGACTAACAACATCGTCCCATATGTT
GTACATTCAACTCTTGCCAGCCGTGAGAATGTGATCAATGATGCCATTGG
TGTTTACCACAAAAGAACATGTTTGAAATTCGTTAAACGCACCAATCAAC
CAAATTATATTGAATTCTTCCAAGGCTCTGGCCAGCCGTGAGAATGTGAT
CAATGATGCCATTGGTGTTTACCACAAAAGAACATGTTTGAAATTCGTTA
AACGCACCAATCAACCAAATTATATTGAATTCTTCCAAGGCTCTGGatgC
TGGTCATTTGTCGGTATGAATGGAGGAAAACAACAAATCAGTCTTGGTCC
TGGGTGTCTCTGGACAGCCACAGCTCAACACGAAATCGGACATGCTATTG
atgCTGGTCATTTGTCGGTATGAATGGAGGAAAACAACAAATCAGTCTTG
GTCCTGGGTGTCTCTGGACAGCCACAGCTCAACACGAAATCGGACATGCT
ATTGgTCTTCAACATGAACAAACCAGACCAGACAGAAATCAATATGTCAA
AATTCATCTTAACAACCTCAACGATCAAGgTCTTCAACATGAACAAACCA
GACCAGACAGAAATCAATATGTCAAAATTCATCTTAACAACCTCAACGAT
CAAGACAACGCTTATAATTTCCATCTGAATAGAGACATTGATTCCTTGGG
AACTCCTTACGATTTCTATTCAATGATGCATTATGGACAACGCTTATAAT
TTCCATCTGAATAGAGACATTGATTCCTTGGGAACTCCTTACGATTTCTA
TTCAATGATGCATTATGGATCGACAGCATTTGCAAAGAgtggtaccaaaa
ccatcacAACTTTGGATCCATCCAAACAACGAATTATTGACAACAACTAC
CATTATGGAATGAGTGATATCGATGCTAAACAAATCAAACTCATGTACAA
CTGCGATGATCGACAGCATTTGCAAAGAgtggtaccaaaaccatcacAAC
TTTGGATCCATCCAAACAACGAATTATTGACAACAACTACCATTATGGAA
TGAGTGATATCGATGCTAAACAAATCAAACTCATGTACAACTGCGATGgt
AATGGTGGTAATAATAACAATGGAGATCTCAAAAATGACGgtAATGGTGG
TAATAATAACAATGGAGATCTCAAAAATGACGGCGAGAATTGTTACTACA
AATGTGGACACAAAGGTGGATCATGCCCACAATATTGTGGTCGAACTGGA
TTGTGTTGTCGAGTTGGTTACAATGATCCCGGTTGTGAACAAGCATCAAA
ACCATGCTACTCTTATCACTGTTGTACTGCACCAAAGAAAGAAGTCAAGA
ATATTGGCGAGAATTGTTACTACAAATGTGGACACAAAGGTGGATCATGC
CCACAATATTGTGGTCGAACTGGATTGTGTTGTCGAGTTGGTTACAATGA
TCCCGGTTGTGAACAAGCATCAAAACCATGCTACTCTTATCACTGTTGTA
CTGCACCAAAGAAAGAAGTCAAGAATATTGgCAAAAATTGTTGGTATGAT
TGCTCATACAAAGGAGGATCTTGTTCATCAGGATTTTGTGGAAAAGATGG
TATTTGCTGCAGGAAAGGATACAACGATAAAGGTTGTGAAAATGCTCAAG
CTGCTTGTGATGGAAAACATTGCTGTACTGcataagCAAAAATTGTTGGT
ATGATTGCTCATACAAAGGAGGATCTTGTTCATCAGGATTTTGTGGAAAA
GATGGTATTTGCTGCAGGAAAGGATACAACGATAAAGGTTGTGAAAATGC
TCAAGCTGCTTGTGATGGAAAACATTGCTGTACTGcataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000046_pilon | genome | sc0000046_pilon:1446051..1453971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 943-1095:7769 |
| Aaloc | 769-939:7384 |
| Aaloc | 727-765:6867 |
| Aaloc | 586-723:6243 |
| Aaloc | 505-582:5570 |
| Aaloc | 430-501:2778 |
| Aaloc | 325-426:2068 |
| Aaloc | 211-321:1603 |
| Aaloc | 94-207:585 |
| Aaloc | 1-90:1 |
|
