XLOC_043362 (mRNA) -

Overview
NameXLOC_043362
Unique NameXLOC_043362
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000692_pilon:3908..4897+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043362 ID=XLOC_043362|Name=XLOC_043362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=990bp|location=Sequence derived from alignment at sc0000692_pilon:3908..4897+ (Clytia hemisphaerica_ch_hm2_pilon)
aagaagacaacaacacaacaacaacataAAGAAATTCAACTGAAGATGAA ATacttattcttatttttcatcatGTGTATTGGAAGAACTCAGGCTTCTA GTTGCAGAATAAGAACTGTACGTAAATTGGATCTCGACAAATATTCGGGC AGATGGTTTGAGGTTAgtgtcgtttttttttttatcgacGATATCGTGTA TCGAATTATTTACAGGCTTCTGATTTGGCTAAGGTTTTTAACagaatttt tcagtttcaataCATTCACTCTTCAGTTACAAGGATGCGCTAGAATACGA GTTGATGTAGTTGGTTCAAACTGCCAGCCCTCTGTATTCTGTATTCCTTT ACTTTTACAAATCCTGCTCAAAAAGGTAGACCTTTACGTCATTTTTTCTA GATGTACAACTCGTTGATTCCAAGGTTAACATTTCAGAGAAATTCCTTTT GCACGACAGCCACGTGTAAGTATTTTCCTTGTTAAACCTCAGTAATGACA GACACGTGACCATTGTATATTTTATTCAatgttaattaattaattaatta aatatTCTTTATACACCAAGTGATACACACCTGTTTCACAGCTTCTAAAA ACTGGAAAACTTGGGTAAAATTTCGTTcctggtgggaaaaataccctaca atttcagtcccactggaaaaaattgatttttatttcatccAAAGTTTATA TATTCAAGGGAAAAACATCGCActcaaaaaccatccccacttagaacaat agaattatGGTCATTGCAATTTCAATAGAAATATTCATCCTTTAATATGG GAtgaagtttcaccggggctgtaagACAGGCGTGTGACAATGGTGGTCGT TGTTACTCAATGATggttttctcaaaataatttcttaatttcattgaaaa acttTAGACACAGTCGTTGGTGATAGCATTAGAGTTTTAAACGCTGGTCG TAGAGGAGGTCCAAGAGGCAGGATTACCAAATACGGCTGA

Coding sequence (CDS) from alignment at sc0000692_pilon:3908..4897+

>XLOC_043362 ID=XLOC_043362|Name=XLOC_043362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000692_pilon:3908..4897+ (Clytia hemisphaerica_ch_hm2_pilon)
aagaagacaacaacacaacaacaacataAAGAAATTCAACTGAAGATGAA
ATacttattcttatttttcatcatGTGTATTGGAAGAACTCAGGCTTCTA
GTTGCAGAATAAGAACTGTACGTAAATTGGATCTCGACAAATATTCGGGC
AGATGGTTTGAGaagaagacaacaacacaacaacaacataAAGAAATTCA
ACTGAAGATGAAATacttattcttatttttcatcatGTGTATTGGAAGAA
CTCAGGCTTCTAGTTGCAGAATAAGAACTGTACGTAAATTGGATCTCGAC
AAATATTCGGGCAGATGGTTTGAGATGTACAACTCGTTGATTCCAAGGTT
AACATTTCAGAGAAATTCCTTTTGCACGACAGCCACGTATGTACAACTCG
TTGATTCCAAGGTTAACATTTCAGAGAAATTCCTTTTGCACGACAGCCAC
GTACACAGTCGTTGGTGATAGCATTAGAGTTTTAAACGCTGGTCGTAGAG
GAGGTCCAAGAGGCAGGATTACCAAATACGGCTGAACACAGTCGTTGGTG
ATAGCATTAGAGTTTTAAACGCTGGTCGTAGAGGAGGTCCAAGAGGCAGG
ATTACCAAATACGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043362XLOC_043362-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000692_pilongenomesc0000692_pilon:3908..4897 +
Properties
Property NameValue
Aaloc229-309:910
Aaloc163-225:402
Aaloc1-162:1