XLOC_043357 (mRNA) -

Overview
NameXLOC_043357
Unique NameXLOC_043357
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000400_pilon:126695..127802-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043357 ID=XLOC_043357|Name=XLOC_043357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1108bp|location=Sequence derived from alignment at sc0000400_pilon:126695..127802- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCGCAAGGTTGAAGAACAGGTATGGAATTTTCACTCAAAGTGGATTTT TTTAAATTTTGACTGCATCTGACTGTCTCAATTATTTTTCATCTTTTTTT AATGAATGATTGCCTGATTGCCTGATTATTTTATCCTCAATCCCAGGTAA CTAAAGCTATCTCTGCTGCACAAAAATTACCAATTCATGCATCAAAGATG TTAGATGGCTCTGCAGAGAAATCGCTATACAACAAGCTTGTCAAAAGAGA TGGGTGAGGAATTCTTTTTTCATATCTGAAAATTTATGCTTAATTTGTGG AAATTAAATGCTGTAAGTTTCATTTGTAAATGTAATAACACCTTCTAAGT AGTTTAACAAAAATATGTTTTTCCTTTCCATTTACAGTAAAAGCCATTCA GGAAAGCGATCTCTTCAGATGTATGGGCCATTCAAAAATTTTGATCCAGA AAATTTCTTGACACAAAAGCAGATTGTAAACTTTGTAAAGGCCAACAATA AGTATGAATTATACCCTCCTAATTCAGTAAAGAGTGGCAAACCAATTAAT TCCTAGTCAAATGAAATTGTGAGAGTGTGAATAAAAAAACCCCTTGCCTA GATGCAAAAATGATCAAACATGCATCTAAGAAAGCCAAAATTTCAAAGGA GAATGAGCAAGCTTTGAAATACTAATTTCAACTTTGAGTCTGATCAATAT TCATCGACAACCATATGCTTCTTTTCTTTTCATTCGATTTCAATCATTTA CTTTCAGATCAAATCTTACTGAATTCCATAAGTTGAAACATAATGGAGTG ATATTTAAATCCCTTGGCTATAAACGATCACCAAGAAGGTCAAATGCAGC TATCATTTTCAAAACAGATGGTATTAATCAAGCTGGATTGATACAGACCT TCCTTAAAGTAACCAACTTTTTATAATAAGGGCAGGGATTAAAATTTACT AGATCAATTCTTTTCAAATCATTTAATGTATCAAATACTTTAATGTTGTT TCTTAATTTTACTTTTAGGTAAATCAAAATGATGGTGTATTTGTCATTGT CTCCTTGTTGAACAAATTAAAAGTGATTTTTCTGGAAGTTTGGGTGGTAG AAAGATAA

Coding sequence (CDS) from alignment at sc0000400_pilon:126695..127802-

>XLOC_043357 ID=XLOC_043357|Name=XLOC_043357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=966bp|location=Sequence derived from alignment at sc0000400_pilon:126695..127802- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCGCAAGGTTGAAGAACAGATTCGCAAGGTTGAAGAACAGGTAACTAA
AGCTATCTCTGCTGCACAAAAATTACCAATTCATGCATCAAAGATGTTAG
ATGGCTCTGCAGAGAAATCGCTATACAACAAGCTTGTCAAAAGAGATGGG
TAACTAAAGCTATCTCTGCTGCACAAAAATTACCAATTCATGCATCAAAG
ATGTTAGATGGCTCTGCAGAGAAATCGCTATACAACAAGCTTGTCAAAAG
AGATGGTAAAAGCCATTCAGGAAAGCGATCTCTTCAGATGTATGGGCCAT
TCAAAAATTTTGATCCAGAAAATTTCTTGACACAAAAGCAGATTGTAAAC
TTTGTAAAGGCCAACAATAATAAAAGCCATTCAGGAAAGCGATCTCTTCA
GATGTATGGGCCATTCAAAAATTTTGATCCAGAAAATTTCTTGACACAAA
AGCAGATTGTAAACTTTGTAAAGGCCAACAATAAATCAAATCTTACTGAA
TTCCATAAGTTGAAACATAATGGAGTGATATTTAAATCCCTTGGCTATAA
ACGATCACCAAGAAGGTCAAATGCAGCTATCATTTTCAAAACAGATGGTA
TTAATCAAGCTGGATTGATACAGACCTTCCTTAAAATCAAATCTTACTGA
ATTCCATAAGTTGAAACATAATGGAGTGATATTTAAATCCCTTGGCTATA
AACGATCACCAAGAAGGTCAAATGCAGCTATCATTTTCAAAACAGATGGT
ATTAATCAAGCTGGATTGATACAGACCTTCCTTAAAGTAAATCAAAATGA
TGGTGTATTTGTCATTGTCTCCTTGTTGAACAAATTAAAAGTGATTTTTC
TGGAAGTTTGGGTGGTAGAAAGATAAGTAAATCAAAATGATGGTGTATTT
GTCATTGTCTCCTTGTTGAACAAATTAAAAGTGATTTTTCTGGAAGTTTG
GGTGGTAGAAAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043357XLOC_043357-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000400_pilongenomesc0000400_pilon:126695..127802 -
Properties
Property NameValue
Aaloc394-483:91
Aaloc244-393:351
Aaloc130-240:721
Aaloc22-126:963
Aaloc1-21:1109