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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:194635..196619+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043307 ID=XLOC_043307|Name=XLOC_043307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1985bp|location=Sequence derived from alignment at sc0000253_pilon:194635..196619+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACGTCTATCAAGACATCGGTATATAATTGGACTACGGCATCACC
TTACAGTACATATGCATCAATACTTTTACAGAATAGTAGTGCGAACATGA
CAAACCTAACCAATCAGAACAGACAGTTGCAGGGGAGCTGTGAATCGGTT
GGCGATATTCAAGTAGAGATGATTTTATACTGTATTTTTATTGCCATTAT
AATGTTATCCAGTGTGGTGGGCAACTTGTTGACCGTACTCTCAATTATAA
TGTCCAGATCGTTGAAGAAAAGAGTCACCTTCTATTTTATTGCAAGTTTG
GGTAAGTTTTTTAATTTCCCAACTTCGCAAATTAAGTTTCAAAGGGTTAT
TTGTCCCCTTCCCTCGAGTAATATTTTCCAATCTTTCCGCTTTTCTATTT
AGTTGAATTTCTTTCTGAATGTTTTACATTTCATTTCCATGGGAGAAACA
CTAAATTATTGCGTTTGCCTATTTGAAACAGAACAAAGGTCtttgaaatt
aaaagaataaaaaaacagGCTATCCTTAAAGAAAATACTCGAAGGCCTTC
TATGGTGGTTTTAGAAAAAGCTTAAGACTACACGTCATTTTAAGGATAAA
GTATAGAAGCACAAGGTTTTgaggccaaaaaattaagaacattcaaaaaa
cattttaaggctttgcaggctCTGAATTAGCAATAACATTCTTATATTCT
TTTACCTTTGGTTTCAGCTTGTTCAGATTTCTGTTTTGCTGTCTTTCTAC
TTCCATTTCGTATCACTACACGTTTGAATGGAAATCGGTTTTGCCATGCA
GTGCCAGCATGTTATGTCATGATCATCTCAGACGCCATCGTTAATGTGGC
AAGCATCCTCAACCTTCTTTTGATCGCTCTTGATAGGTAAGTTTACTTTA
GTCGTATTTATCATGTTCGAAAACAACTTCACGTCAATAAACCAACTTGA
TCTTGTCCTAGAATTTGTATATCAACTACCAAGGTAAGAAAGGTATGTGC
GAACCGAACCTAAAAAAGAGGCTAACATGTCTTTCTTGATCCAAAATGTT
CTCCCTTTTTTGCCTCCTATCTTCTGTATTGGCCcactgtttataaaaaa
atttttgggcctaGTGTAACAGGGAAACTAGTAGCCTGAGTAATTAATTT
TCCCAAAGAGGTTATGAACACTTATTCACTTTACAGTACTCCTACTAACA
ATTCTTCTCTTTCCCATTCTAGGTTTATCGCTATCAAATTCCCTTTCATT
TACACTGAGCGTATGACAGGGCGTGCTGCAAAACGCATGATTGCTGGTGT
CTGGTCATTTGCTATGTTGTGGAGTTTTCTTGGTATCTTTAGATGGGATA
ACAATGGTTCCATGATAAGCATCACTACAAAACCTGTTTGTGCAAATGTC
AATTATAATTTCTACGCAGCCTCCTCTTTTGGGATATATATTACTGTCTT
AATCATCATCACTTCGAGCTATATAACAATTCTCATGGTTGCGTTGAAGC
AAATCAAGGCAATCGAGGCAACAAGTGTCACTGTTGTCTTACTTAACCCG
AACAATAATGGATCACCAGGGAcaacagacaaaaataaaaaacgaagaAG
ACGAAGACTTAATCGTGAGTTGCGAGCAACGAAATCAGTTGCTATTGTGT
TTTTAGCATACGTGATTTGTTGGTTACCTTTATACGTGATCAATGTGATC
ATACAGATTGACAGTAATTATTTCTTGAAACTCGACAAAGGTGTCTTTCT
TTTCATCTATTACGCTTTTGTGGAAATACTACCAGCAGTCAATACCATGA
TCAACCCCTTCATATATTCCTTTTCAAATAAACAATTCAGAGATGCTTTT
AAGAGAATTATCTCAAAAACATTAGGATTACGTTTAAACTTGATGGGACA
GGACGATTTTTGCTCACTGGATATGAGTTCGCTACCAAATTCGCCCTCGG
TTTCACGGATGGGATCTAGTATGAAGAAAGTGTAA Coding sequence (CDS) from alignment at sc0000253_pilon:194635..196619+ >XLOC_043307 ID=XLOC_043307|Name=XLOC_043307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000253_pilon:194635..196619+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACGTCTATCAAGACATCGGTATATAATTGGACTACGGCATCACC
TTACAGTACATATGCATCAATACTTTTACAGAATAGTAGTGCGAACATGA
CAAACCTAACCAATCAGAACAGACAGTTGCAGGGGAGCTGTGAATCGGTT
GGCGATATTCAAGTAGAGATGATTTTATACTGTATTTTTATTGCCATTAT
AATGTTATCCAGTGTGGTGGGCAACTTGTTGACCGTACTCTCAATTATAA
TGTCCAGATCGTTGAAGAAAAGAGTCACCTTCTATTTTATTGCAAGTTTG
GATGGAAACGTCTATCAAGACATCGGTATATAATTGGACTACGGCATCAC
CTTACAGTACATATGCATCAATACTTTTACAGAATAGTAGTGCGAACATG
ACAAACCTAACCAATCAGAACAGACAGTTGCAGGGGAGCTGTGAATCGGT
TGGCGATATTCAAGTAGAGATGATTTTATACTGTATTTTTATTGCCATTA
TAATGTTATCCAGTGTGGTGGGCAACTTGTTGACCGTACTCTCAATTATA
ATGTCCAGATCGTTGAAGAAAAGAGTCACCTTCTATTTTATTGCAAGTTT
GGCTTGTTCAGATTTCTGTTTTGCTGTCTTTCTACTTCCATTTCGTATCA
CTACACGTTTGAATGGAAATCGGTTTTGCCATGCAGTGCCAGCATGTTAT
GTCATGATCATCTCAGACGCCATCGTTAATGTGGCAAGCATCCTCAACCT
TCTTTTGATCGCTCTTGATAGCTTGTTCAGATTTCTGTTTTGCTGTCTTT
CTACTTCCATTTCGTATCACTACACGTTTGAATGGAAATCGGTTTTGCCA
TGCAGTGCCAGCATGTTATGTCATGATCATCTCAGACGCCATCGTTAATG
TGGCAAGCATCCTCAACCTTCTTTTGATCGCTCTTGATAGGTTTATCGCT
ATCAAATTCCCTTTCATTTACACTGAGCGTATGACAGGGCGTGCTGCAAA
ACGCATGATTGCTGGTGTCTGGTCATTTGCTATGTTGTGGAGTTTTCTTG
GTATCTTTAGATGGGATAACAATGGTTCCATGATAAGCATCACTACAAAA
CCTGTTTGTGCAAATGTCAATTATAATTTCTACGCAGCCTCCTCTTTTGG
GATATATATTACTGTCTTAATCATCATCACTTCGAGCTATATAACAATTC
TCATGGTTGCGTTGAAGCAAATCAAGGCAATCGAGGCAACAAGTGTCACT
GTTGTCTTACTTAACCCGAACAATAATGGATCACCAGGGAcaacagacaa
aaataaaaaacgaagaAGACGAAGACTTAATCGTGAGTTGCGAGCAACGA
AATCAGTTGCTATTGTGTTTTTAGCATACGTGATTTGTTGGTTACCTTTA
TACGTGATCAATGTGATCATACAGATTGACAGTAATTATTTCTTGAAACT
CGACAAAGGTGTCTTTCTTTTCATCTATTACGCTTTTGTGGAAATACTAC
CAGCAGTCAATACCATGATCAACCCCTTCATATATTCCTTTTCAAATAAA
CAATTCAGAGATGCTTTTAAGAGAATTATCTCAAAAACATTAGGATTACG
TTTAAACTTGATGGGACAGGACGATTTTTGCTCACTGGATATGAGTTCGC
TACCAAATTCGCCCTCGGTTTCACGGATGGGATCTAGTATGAAGAAAGTG
TAAGTTTATCGCTATCAAATTCCCTTTCATTTACACTGAGCGTATGACAG
GGCGTGCTGCAAAACGCATGATTGCTGGTGTCTGGTCATTTGCTATGTTG
TGGAGTTTTCTTGGTATCTTTAGATGGGATAACAATGGTTCCATGATAAG
CATCACTACAAAACCTGTTTGTGCAAATGTCAATTATAATTTCTACGCAG
CCTCCTCTTTTGGGATATATATTACTGTCTTAATCATCATCACTTCGAGC
TATATAACAATTCTCATGGTTGCGTTGAAGCAAATCAAGGCAATCGAGGC
AACAAGTGTCACTGTTGTCTTACTTAACCCGAACAATAATGGATCACCAG
GGAcaacagacaaaaataaaaaacgaagaAGACGAAGACTTAATCGTGAG
TTGCGAGCAACGAAATCAGTTGCTATTGTGTTTTTAGCATACGTGATTTG
TTGGTTACCTTTATACGTGATCAATGTGATCATACAGATTGACAGTAATT
ATTTCTTGAAACTCGACAAAGGTGTCTTTCTTTTCATCTATTACGCTTTT
GTGGAAATACTACCAGCAGTCAATACCATGATCAACCCCTTCATATATTC
CTTTTCAAATAAACAATTCAGAGATGCTTTTAAGAGAATTATCTCAAAAA
CATTAGGATTACGTTTAAACTTGATGGGACAGGACGATTTTTGCTCACTG
GATATGAGTTCGCTACCAAATTCGCCCTCGGTTTCACGGATGGGATCTAG
TATGAAGAAAGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:194635..196619 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 472-1233:1224 |
| Aaloc | 304-468:720 |
| Aaloc | 1-300:1 |
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