XLOC_043295 (mRNA) -

Overview
NameXLOC_043295
Unique NameXLOC_043295
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000004_pilon:790291..791029+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043295 ID=XLOC_043295|Name=XLOC_043295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=739bp|location=Sequence derived from alignment at sc0000004_pilon:790291..791029+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAGAAGTCTATCTCCAGCAAACAGAAATTGAAAGGCTTGTTGGAGA TATTTCCTCAACAATGGCTACTAGTAAGAACTTTTTCCTTTAATAAAGAC AGGTTTTTGTAGCATACGTTAAATTGACTCAGGAGATTTTCCCTCTGAAT TCTCTAAGATGTTGTTGTCCAAAAACATTGTCTACATTATAACTTTCTTC CTATTCACCAGGCTTCAATGCTAATGAATGGTCTGCAAATGATCAGTATC CTGACTTGACATTGCCAGAGTTGAATTCTGTTTCATTGGTTTGGACCATT AGAGATAGTAGACTTGTAAATTTGCCCTTCAACTTGTTGGTGGAAGGTGA TGTTGTGCTCCTTGGACCAAGTAGGAAATCTCCTGCCACCTGTAGACAAG TAAGCTGCTTTAATAATTTAGACTTATGGTTATTGAAGAAACAATCATCA TATCCTGCGTCGCTATGAGTACAGCATTACGTAGAGTGTAGTAATTGTAA GTTTTAAAATTCTCTGTTTCTCAATATCTAACTTACATACTATGATCTGT ATATTATGTCTTCTCTTCTTCCTATTTCAGATTTGTACTAGGGACGGTGC ACAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACAAA GCCCTGCTCAACAAAAAACAGTACTGACAATGCATGGACGAGAATTATTC GAAGTTGTGGAGGCTcccttgaaaaatatattgatgTAA

Coding sequence (CDS) from alignment at sc0000004_pilon:790291..791029+

>XLOC_043295 ID=XLOC_043295|Name=XLOC_043295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000004_pilon:790291..791029+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAGAAGTCTATCTCCAGCAAACAGAAATTGAAAGGCTTGTTGGAGA
TATTTCCTCAACAATGGCTACTAATGCGAGAAGTCTATCTCCAGCAAACA
GAAATTGAAAGGCTTGTTGGAGATATTTCCTCAACAATGGCTACTAGCTT
CAATGCTAATGAATGGTCTGCAAATGATCAGTATCCTGACTTGACATTGC
CAGAGTTGAATTCTGTTTCATTGGTTTGGACCATTAGAGATAGTAGACTT
GTAAATTTGCCCTTCAACTTGTTGGTGGAAGGTGATGTTGTGCTCCTTGG
ACCAAGTAGGAAATCTCCTGCCACCTGTAGACAAGCTTCAATGCTAATGA
ATGGTCTGCAAATGATCAGTATCCTGACTTGACATTGCCAGAGTTGAATT
CTGTTTCATTGGTTTGGACCATTAGAGATAGTAGACTTGTAAATTTGCCC
TTCAACTTGTTGGTGGAAGGTGATGTTGTGCTCCTTGGACCAAGTAGGAA
ATCTCCTGCCACCTGTAGACAAATTTGTACTAGGGACGGTGCACAGCCAG
TGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACAAAGCCCTGCT
CAACAAAAAACAGTACTGACAATGCATGGACGAGAATTATTCGAAGTTGT
GGAGGCTcccttgaaaaatatattgatgTAAATTTGTACTAGGGACGGTG
CACAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACAA
AGCCCTGCTCAACAAAAAACAGTACTGACAATGCATGGACGAGAATTATT
CGAAGTTGTGGAGGCTcccttgaaaaatatattgatgTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043295XLOC_043295-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000004_pilongenomesc0000004_pilon:790291..791029 +
Properties
Property NameValue
Aaloc262-420:581
Aaloc76-261:214
Aaloc1-72:1