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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:892367..895030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043287 ID=XLOC_043287|Name=XLOC_043287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2664bp|location=Sequence derived from alignment at sc0000043_pilon:892367..895030+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcctgaaaaattaaagaaactcCAAAATGAAGTCCGAATTGGAGG
AAAAGGATctcaaagaagaaagaagaaggtTGTCCACAAAACTGCCACAA
CTGATGACAAAAAATTACAAGtcactttgaaaaaattaagtgtTAATCCC
ATACCTGGAATTGAAGAAGTCAACATGATCAAAGATGATGGACAAGTCAT
TCactttaaaaaccctaaaggTCAGTGAAAGCAATTACAACTTCAAATGA
AACCAATGGGACAAACAGTGTCTCTAATTGAAACATTTTAAtgtaatggg
ccattccatttcatGACCATACTGGTGGGTGGACgaatatttccaggggg
tctaaagaagtgtttttcatttttccagggggtaaaaagttattattaaa
tttccaggggtgaacaactgattttagttcatccACCCTCAATTTAAGAG
ATGAAAAGAATTATTTCCAAGGGTTctattgcaaattttgccattttcca
gcaGGTATCTACACTTTCCgataaatttgttttcaattgaAAAGGTTTGT
CCGCCCCCctttatggaaattttatggaacagcccaatgttGATTTAACA
TTTTGCTTCAGAGGGATGTAACTTTCTcactgtttttcatttttgaaagt
ttcgaaatttatgAACTGCCATTTTTTGAACAGGCTTTGTTTCGAAGCTA
CTGCGTGATTGATAGTTTTGTGTTTGAATGTGATTTATATTTTCCATGTT
TTATCATCTATTCAGTTCAAGCTTCTCTTGGTGCAAACACATTTGCTGTG
ACTGGACCTTGTGAAAATAAACGTAAGTTGTTTTAATATACTTCTAATGT
TTTATCTCTGTATGGTTGCAAAGTTAGAGGGGACCACCAGTTAACTATTA
TGATTATAGCTTGTTTTCCTTTCGTCCAGCTTTAGTCGCTTTAATGGTAG
TTTTAATCTGAAAGCATCAAGATGATTtaaatgttttacttttttcagcT
CTTACTGATATGTTGCCAAGTATTTTGAACCAAATCGTAAGTACTTTCTG
CTTCAGTTTTTTCTGTGCAAATCATAATTTCCATTGAATTACTGGGTAGT
TTGAAAACCATGTAAGAAGTAGGAATTAACTCCTTGTATTTTGTATTGTC
TCTGTTTCCAGGGGGCTGAAGGACTAACGAACCTGCGCAAACTTGCTGAA
CGAATGCCACAAACTCGACTCGAAACTGCCACTGAAAGTGACGACGTGCC
AAGTAAGTACCTTATTTTCCGATCCAATCTTTATGGACTCGAGTTAtatc
atggaggtaataaaaaaattggagagtcaatgccttttgttctattctga
tttatcatcggaagcaaacagctttttggttgctttgggaataagatgat
taattttgggtatactcgtgggaataattaagatgaatgaaaagacatta
catttttaacaagtatattgacatacaatagccttgtcatgaaaaattga
aaaaaacttcatataataagcacaatactccaaacCTCTAGgagaagctg
cccataaagccatcgatagatttaaaacagaattacgtgttacgattagg
aaccttgtatcgatcattttgtcagagtatgaaaaccgctgcccacttag
acgtgaagattttaagataagaaatttcaatgataatgtgatgcaatTCT
CATTgttaacaaaatgccagcccaaaaatgtgtccttatgaaattaatat
actcttttagtcttacatcagttgaaactatttcgaatcgcattttaaga
gggcttttcggcaaaattaagttttcaaaatcaaccaaaaggtctcttta
tgttcttataaagttataaattgatgttttttgcttccaatgatggtaca
tcaaagaaaagccgctttgaatagatttataaaagatttcaacgaccatt
tagatcattaccgagacgttttctctccatctatatctttattaattatt
aattacCTCCATGTTTATATATCATTGAGTTTTGTAAGTTCACCTGAATT
TGCCATGCACAAATGATCAAGTCGACTTTAAATAAGAATTTCGTTTAACG
TCGCTCTTTGCTGACCGAATATTTATTTActtgaaatgaaattgtcaCGG
CCAGAGACCTACCGCCTAAACTACGCATATGTGCTTATGTCATAAAGTTA
AACATCATTAGCTGTTTGTTATCATTGAGTTCTTAGTCCTGAAGAGAGCT
TGCATCTCCAGTCTTTGAAAAATGTCTTGCGTTTCAAGGTCCATGTATTG
AACCAGTTTGGAAATAGCAAATCTTATTGAGCAGctttttaatttagaaa
attataTTTGGGTGGTTTTACTTCGAACGCACAAAACATATCGAATGAAT
AGTGGTCTTTTTTCACAAGGAACCTTTCGGTCTAAATTCAGCAACATAAC
ATTGTTCTGATTTTGAAGGTAACTCTACCTGGCTATGTTGCCTTGAAATC
AATCAAGttatttactttcattttcagcccTGGTTGAGAATTTCGATGAA
CCTTcgaagaacgaaacgactgccgaacccgaagcgactgccgaaacgga
aacgaagaacgaGCCATCTGAATCGACCGAAACGACCGACGCCAAAATTG
AAGAAGTGTCATAG Coding sequence (CDS) from alignment at sc0000043_pilon:892367..895030+ >XLOC_043287 ID=XLOC_043287|Name=XLOC_043287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1086bp|location=Sequence derived from alignment at sc0000043_pilon:892367..895030+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcctgaaaaattaaagaaactcCAAAATGAAGTCCGAATTGGAGG
AAAAGGATctcaaagaagaaagaagaaggtTGTCCACAAAACTGCCACAA
CTGATGACAAAAAATTACAAGtcactttgaaaaaattaagtgtTAATCCC
ATACCTGGAATTGAAGAAGTCAACATGATCAAAGATGATGGACAAGTCAT
TCactttaaaaaccctaaagatgaatcctgaaaaattaaagaaactcCAA
AATGAAGTCCGAATTGGAGGAAAAGGATctcaaagaagaaagaagaaggt
TGTCCACAAAACTGCCACAACTGATGACAAAAAATTACAAGtcactttga
aaaaattaagtgtTAATCCCATACCTGGAATTGAAGAAGTCAACATGATC
AAAGATGATGGACAAGTCATTCactttaaaaaccctaaagTTCAAGCTTC
TCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTGAAAATAAACTTC
AAGCTTCTCTTGGTGCAAACACATTTGCTGTGACTGGACCTTGTGAAAAT
AAACcTCTTACTGATATGTTGCCAAGTATTTTGAACCAAATCcTCTTACT
GATATGTTGCCAAGTATTTTGAACCAAATCGGGGCTGAAGGACTAACGAA
CCTGCGCAAACTTGCTGAACGAATGCCACAAACTCGACTCGAAACTGCCA
CTGAAAGTGACGACGTGCCAAGGGGCTGAAGGACTAACGAACCTGCGCAA
ACTTGCTGAACGAATGCCACAAACTCGACTCGAAACTGCCACTGAAAGTG
ACGACGTGCCAAcccTGGTTGAGAATTTCGATGAACCTTcgaagaacgaa
acgactgccgaacccgaagcgactgccgaaacggaaacgaagaacgaGCC
ATCTGAATCGACCGAAACGACCGACGCCAAAATTGAAGAAGTGTCATAGc
ccTGGTTGAGAATTTCGATGAACCTTcgaagaacgaaacgactgccgaac
ccgaagcgactgccgaaacggaaacgaagaacgaGCCATCTGAATCGACC
GAAACGACCGACGCCAAAATTGAAGAAGTGTCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:892367..895030 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-543:2530 |
| Aaloc | 316-405:1162 |
| Aaloc | 280-315:1001 |
| Aaloc | 223-276:768 |
| Aaloc | 1-219:1 |
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