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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:860877..863466+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043286 ID=XLOC_043286|Name=XLOC_043286|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2590bp|location=Sequence derived from alignment at sc0000043_pilon:860877..863466+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACATGGAATTCAACATGCTACGACATTGATATGAAAGACGGGGG
AAGACGGCGATATTGCAATGTGACGGACCTATGGCAACCGACCATCACAA
AGACTGACGGATATGTTGTAGCTATATGTATCTTTATCTTTGCTGTTGTT
GTAACTATCGGTAAGTAAAGCCTTTTCCAAATAATGGCAGTCCATGCAAT
TCATAATTTATAATACATAATTATCTTGGTTTAAAATCAATATCGTATTC
CGAAGCACTTGTGTACCAgggggggtagtaaaatctcagacataatgatg
tttactacggtggtgatgtgacgaaaaatcgaaaaaaaaatttactaccc
agggtagttaaatactaaaatgggtggtatctatgtgttaaatgttgaaa
atattttactacctgggtagttaaaactggtaaaattagcaaatttaagc
tatttttgtaattcttttaattttttggatgacttttctgaaaaaatctg
aaaatttttataatttgaaaaaattttctgttggaatgttgtttgctgca
aacaaaaaattctcgaaattttttgtcaatgtaaaaaagacaaaagggca
aaacattaatttttgcaaaaatgtgtcacagaaataatcattttttagct
ttttttgcaaaatcagtccgaaaagcaaccaaaaaataggtggtctccat
gacaaattgtcccaaaaacttttactaccagggtagtaaaataactcttc
caagagtctgggtggtggtatgtaaaaattcgtaaaaatccttttactac
tcatatatgtctgagattttactaccgacccccctgtGTGTACCACTTTT
TGATTCTACTACTGATGATTGTTGGTTCGTGAGAGCGCTGTCTGTCTGAA
CCATAAAAAACGATCTAAGGGACTGAGTTCGAGTTTATTCCTCAAAACCT
ctgaaatgaagatgaaaaattaagcttattgtatttttaagaaagaaaat
ctCTCTTCAAAGATTGTATTCAAAGTAGTTTAAAGTTTTTAGATAAATTC
AAAGGTCTAACTTCAAAAGGCCTCTAAAATAGACTAAAAAGAGCAAAAAT
GTTTCTACCtatctttttttcgaaattttcgaaAGCAACATTTAAAGTAT
ATTGTCCATATTTGTCCTTCTTGAGCAATGCCTGGAAAGCCCTACTAAAT
GAAAGGATCCAGGTATCCTCAAGCTCCAGTGAGTTATATGTGAAAGACTT
AAGTTAAGACATTTTACATCTGTACTTTTCAATAGTGCTAGGATGTCACC
TAATCAAGGTAATTAAGAAAAGTTCAAAGAAGCTGAAATTTCCTGATAAA
GTTTATGAGCGAGAACATATAAATGcacattcattcattcattcattcat
tttagTATCTTTGCGCCGCATGAAATTTCTGAAAGATTTGTGCTGTGTGT
TTGGTCGTGACGTAGGATGTTGCACGCTCAGCTCGTTCGTCTTTGCAGTA
ATTGCTGGTGCAGTGTGGAAgattgctgacgtcatcattgattgtttcAC
ATTTTATCGATTGGGAAGTGGAAGTAAGTCAAAAGACTGTTTGCATTGAT
CAATTTTTATGGATAAATTTGATATCGAAAAACTGAGATATCAATACTTG
ACACCATTGTCTCAAAGCTCCGGTGAAACATTTCCTGACGGTAGTAGTGG
AAATCCGAAATCCCAAtgggtaaaaaaacttttgcaagctcaaaaattcc
agtaAGGATGGTTTCAGGGGGCCATTTCTTCTATTGATTTTGggtaaaaa
atcaataaaaagtcAACTTCTCAGTGGGCGGCTGAAATTGTAAGGGTCCC
ACAGGGTCTGTGACACGAGAGCGATACATGATTTTGGATCTCTGATGTAT
TTTGCGACTTACTCGTCATGTCTTTTACAATTCTATTTTCAGGTTTGATC
GATGGTTTGATCTACCGTAATGGAGACGTGTTGAACAGTATCGTTGCATT
CACAGTGGTGGGAGTAGTGGGAATGATCTTGCGTTTCCGATTGGTGCATC
TCAAGGCGGATgacattcaaaataaacaagacGTTCAGACGGTCAAGTTG
TTGTTGGTCCTCATATCCTTTTGTTTGGAAGATTCAGTTCAAATGTTTCT
CGAGTATTTCTGGATCCAAATACGTCACCATCAACATACCGACATATCTT
GTCATCAAAGATACAATTATCGCCATCCTTTCTCTCTTCTCATTGGTCAG
TTCCATTCTCCTATTACGTCACCAATCATCACGACGCGCCTTCATTTTCT
TCGCCTTTGGCGTGATCATCAACATTGCGGAGTTTTTACGCATCTCTGCC
GTCATCAAACAATATCGCAGGGGATCTTTCGAGCATGATTGTTTGACAGT
GAGAGATGGAAGGTTGTGGCAAACACCCTTCAATGGACAATGTCTGACGT
CCACCGATAAATGGATCGTCGCGTTGACTTTCCTTCCTTTTGCTGCTTAT
CCTTTCTTAGTGGAAGCCTTCAAAAGTGATATTCAATTGCTCTTCTCGAA
AACCAAATGCTCTTCCAATGAACTTTTAGTCGAAAGTTGA Coding sequence (CDS) from alignment at sc0000043_pilon:860877..863466+ >XLOC_043286 ID=XLOC_043286|Name=XLOC_043286|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1952bp|location=Sequence derived from alignment at sc0000043_pilon:860877..863466+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACATGGAATTCAACATGCTACGACATTGATATGAAAGACGGGGG
AAGACGGCGATATTGCAATGTGACGGACCTATGGCAACCGACCATCACAA
AGACTGACGGATATGTTGTAGCTATATGTATCTTTATCTTTGCTGTTGTT
GTAACTATCGATGGAAACATGGAATTCAACATGCTACGACATTGATATGA
AAGACGGGGGAAGACGGCGATATTGCAATGTGACGGACCTATGGCAACCG
ACCATCACAAAGACTGACGGATATGTTGTAGCTATATGTATCTTTATCTT
TGCTGTTGTTGTAACTATCGTATCTTTGCGCCGCATGAAATTTCTGAAAG
ATTTGTGCTGTGTGTTTGGTCGTGACGTAGGATGTTGCACGCTCAGCTCG
TTCGTCTTTGCAGTAATTGCTGGTGCAGTGTGGAAgattgctgacgtcat
cattgattgtttcACATTTTATCGATTGGGAAGTGGAATATCTTTGCGCC
GCATGAAATTTCTGAAAGATTTGTGCTGTGTGTTTGGTCGTGACGTAGGA
TGTTGCACGCTCAGCTCGTTCGTCTTTGCAGTAATTGCTGGTGCAGTGTG
GAAgattgctgacgtcatcattgattgtttcACATTTTATCGATTGGGAA
GTGGAAGTTTGATCGATGGTTTGATCTACCGTAATGGAGACGTGTTGAAC
AGTATCGTTGCATTCACAGTGGTGGGAGTAGTGGGAATGATCTTGCGTTT
CCGATTGGTGCATCTCAAGGCGGATgacattcaaaataaacaagacGTTC
AGACGGTCAAGTTGTTGTTGGTCCTCATATCCTTTTGTTTGGAAGATTCA
GTTCAAATGTTTCTCGAGTATTTCTGGATCCAAATACGTCACCATCAACA
TACCGACATATCTTGTCATCAAAGATACAATTATCGCCATCCTTTCTCTC
TTCTCATTGGTCAGTTCCATTCTCCTATTACGTCACCAATCATCACGACG
CGCCTTCATTTTCTTCGCCTTTGGCGTGATCATCAACATTGCGGAGTTTT
TACGCATCTCTGCCGTCATCAAACAATATCGCAGGGGATCTTTCGAGCAT
GATTGTTTGACAGTGAGAGATGGAAGGTTGTGGCAAACACCCTTCAATGG
ACAATGTCTGACGTCCACCGATAAATGGATCGTCGCGTTGACTTTCCTTC
CTTTTGCTGCTTATCCTTTCTTAGTGGAAGCCTTCAAAAGTGATATTCAA
TTGCTCTTCTCGAAAACCAAATGCTCTTCCAATGAACTTTTAGTCGAAAG
TTGAGTTTGATCGATGGTTTGATCTACCGTAATGGAGACGTGTTGAACAG
TATCGTTGCATTCACAGTGGTGGGAGTAGTGGGAATGATCTTGCGTTTCC
GATTGGTGCATCTCAAGGCGGATgacattcaaaataaacaagacGTTCAG
ACGGTCAAGTTGTTGTTGGTCCTCATATCCTTTTGTTTGGAAGATTCAGT
TCAAATGTTTCTCGAGTATTTCTGGATCCAAATACGTCACCATCAACATA
CCGACATATCTTGTCATCAAAGATACAATTATCGCCATCCTTTCTCTCTT
CTCATTGGTCAGTTCCATTCTCCTATTACGTCACCAATCATCACGACGCG
CCTTCATTTTCTTCGCCTTTGGCGTGATCATCAACATTGCGGAGTTTTTA
CGCATCTCTGCCGTCATCAAACAATATCGCAGGGGATCTTTCGAGCATGA
TTGTTTGACAGTGAGAGATGGAAGGTTGTGGCAAACACCCTTCAATGGAC
AATGTCTGACGTCCACCGATAAATGGATCGTCGCGTTGACTTTCCTTCCT
TTTGCTGCTTATCCTTTCTTAGTGGAAGCCTTCAAAAGTGATATTCAATT
GCTCTTCTCGAAAACCAAATGCTCTTCCAATGAACTTTTAGTCGAAAGTT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:860877..863466 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 556-978:2168 |
| Aaloc | 331-552:1945 |
| Aaloc | 163-327:1408 |
| Aaloc | 1-159:1 |
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