XLOC_043276 (mRNA) -

Overview
NameXLOC_043276
Unique NameXLOC_043276
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000042_pilon:1717994..1718935-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043276 ID=XLOC_043276|Name=XLOC_043276|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=942bp|location=Sequence derived from alignment at sc0000042_pilon:1717994..1718935- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTTCTTGACGAGATCACGAACCCAATACAAAAATTTATGTGCAA GTTACACGGAATGACCAATGATCATAATTATGCACCTCTATCCAACCTCT TATACCCACAATTCAATATGGATGCCGGTCACAAAAGTAATTTATCAGAA CAAGAAATAGTCAACCTCGTTTGGGTTATGTTAGAAGAATTACGTCATAT TCTAGAGGCAACTCAAAATTTTCCAAAGCAAATGAGACATTGGATGGATA ATATCCGCCCGACATCCGACATGGGCGTTCAGACAGATCTCGAAACGCAA TTGACAGATAATAAATATGTGCAGATCACATGTAGTAGCGAGGAGTTTAA TCGACGTATAAACGCTTTCATTAAACGTAAGCGCACTCAAGCAGACGCCT TCAATCGTAGAGAATTCTGCAAACTACATGAAGAAGATGAACAATTTTCG TGTGCGCGGACGGACTCAGTTCGCGTGCACCGCCGTTCGACCAAAAGTCT TCTTCGGATTGAACGCGTGTACAACAATCCTCAAAAGAAATTAAAATCAC CTCTTAAGACGGATCGCTTAAAAAGTTGGCCGCCCATCCACCCTTCAAAC GCCCTAACCTACTCAAACGCACCACGTGACATCAAAGAACGAATTAAGAA TCTCCATACGGTTGTCAAGCCAACAGGACGTATAGACCCTACCACTGATG TGTATGGAACTTTACGTGAGCTTGAAAACAAAGTGTTGTACCTTGAAACG TTATCTCCCGAATATTTCTCAATGAGAAAACAAACGAATAGGTTTTCGAA CATGAACGAGAATGCGATCTCTACTGAAGGTTTGAATACAGAAACATCAG CTTCATACCAAAATAATATGCATTTATTGGAAAGTCGTATGGATGACTTG AAGAGTAGGTTGAAAGAGAAAATGGAGAAACCACCTTCGTAA

Coding sequence (CDS) from alignment at sc0000042_pilon:1717994..1718935-

>XLOC_043276 ID=XLOC_043276|Name=XLOC_043276|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000042_pilon:1717994..1718935- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTTCTTGACGAGATCACGAACCCAATACAAAAATTTATGTGCAA
GTTACACGGAATGACCAATGATCATAATTATGCACCTCTATCCAACCTCT
TATACCCACAATTCAATATGGATGCCGGTCACAAAAGTAATTTATCAGAA
CAAGAAATAGTCAACCTCGTTTGGGTTATGTTAGAAGAATTACGTCATAT
TCTAGAGGCAACTCAAAATTTTCCAAAGCAAATGAGACATTGGATGGATA
ATATCCGCCCGACATCCGACATGGGCGTTCAGACAGATCTCGAAACGCAA
TTGACAGATAATAAATATGTGCAGATCACATGTAGTAGCGAGGAGTTTAA
TCGACGTATAAACGCTTTCATTAAACGTAAGCGCACTCAAGCAGACGCCT
TCAATCGTAGAGAATTCTGCAAACTACATGAAGAAGATGAACAATTTTCG
TGTGCGCGGACGGACTCAGTTCGCGTGCACCGCCGTTCGACCAAAAGTCT
TCTTCGGATTGAACGCGTGTACAACAATCCTCAAAAGAAATTAAAATCAC
CTCTTAAGACGGATCGCTTAAAAAGTTGGCCGCCCATCCACCCTTCAAAC
GCCCTAACCTACTCAAACGCACCACGTGACATCAAAGAACGAATTAAGAA
TCTCCATACGGTTGTCAAGCCAACAGGACGTATAGACCCTACCACTGATG
TGTATGGAACTTTACGTGAGCTTGAAAACAAAGTGTTGTACCTTGAAACG
TTATCTCCCGAATATTTCTCAATGAGAAAACAAACGAATAGGTTTTCGAA
CATGAACGAGAATGCGATCTCTACTGAAGGTTTGAATACAGAAACATCAG
CTTCATACCAAAATAATATGCATTTATTGGAAAGTCGTATGGATGACTTG
AAGAGTAGGTTGAAAGAGAAAATGGAGAAACCACCTTCGTAAATGGAATT
TCTTGACGAGATCACGAACCCAATACAAAAATTTATGTGCAAGTTACACG
GAATGACCAATGATCATAATTATGCACCTCTATCCAACCTCTTATACCCA
CAATTCAATATGGATGCCGGTCACAAAAGTAATTTATCAGAACAAGAAAT
AGTCAACCTCGTTTGGGTTATGTTAGAAGAATTACGTCATATTCTAGAGG
CAACTCAAAATTTTCCAAAGCAAATGAGACATTGGATGGATAATATCCGC
CCGACATCCGACATGGGCGTTCAGACAGATCTCGAAACGCAATTGACAGA
TAATAAATATGTGCAGATCACATGTAGTAGCGAGGAGTTTAATCGACGTA
TAAACGCTTTCATTAAACGTAAGCGCACTCAAGCAGACGCCTTCAATCGT
AGAGAATTCTGCAAACTACATGAAGAAGATGAACAATTTTCGTGTGCGCG
GACGGACTCAGTTCGCGTGCACCGCCGTTCGACCAAAAGTCTTCTTCGGA
TTGAACGCGTGTACAACAATCCTCAAAAGAAATTAAAATCACCTCTTAAG
ACGGATCGCTTAAAAAGTTGGCCGCCCATCCACCCTTCAAACGCCCTAAC
CTACTCAAACGCACCACGTGACATCAAAGAACGAATTAAGAATCTCCATA
CGGTTGTCAAGCCAACAGGACGTATAGACCCTACCACTGATGTGTATGGA
ACTTTACGTGAGCTTGAAAACAAAGTGTTGTACCTTGAAACGTTATCTCC
CGAATATTTCTCAATGAGAAAACAAACGAATAGGTTTTCGAACATGAACG
AGAATGCGATCTCTACTGAAGGTTTGAATACAGAAACATCAGCTTCATAC
CAAAATAATATGCATTTATTGGAAAGTCGTATGGATGACTTGAAGAGTAG
GTTGAAAGAGAAAATGGAGAAACCACCTTCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043276XLOC_043276-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000042_pilongenomesc0000042_pilon:1717994..1718935 -
Properties
Property NameValue
Aaloc1-942:943