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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1780113..1783889- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043260 ID=XLOC_043260|Name=XLOC_043260|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3777bp|location=Sequence derived from alignment at sc0000042_pilon:1780113..1783889- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAATCAAACTCAAACTCTTCTTCAAGAATGTTTAGTTAGTACTGG
TCATGTTGAGTGCTGTGCAATTTTTCGAAGAAAAGATATCCTACTGCGTG
CAAACTCAAATGGCTTTACAGTAAGTGCTGCTGGCTAAAATTATGAAAAT
GAAAACAGTCCCATCTCCAGACCAGACAGTGCTCTTTTTTGAGGGACAGG
ACAGATTTCGATCAAATTTAAATCTGAGGGGCAGAAAAGCTCAAACTTTT
ACCATATTTTCAATGTATTTTGAACAAGTTTGGCAATTTCAGGGGAGGGT
TTTCAATTTTCCAAAATTCCTTGGGGACAGCAGCCTAGCCTAGCCATGCC
ATAAACTGATAAGTTCATTGTTGCATTTAACCATGGCATTCTGTTATTCT
TGAATATGATAGACTAGTTCCATCATAGTAGCGTAGATATCTTTTAAAAC
AGGATTCACATTCAAGACCTTATTTTCGTCTGAGGGTTTATTTGACTTCA
AATAAATTTTACTTGTCGCTTGTGCTTGTGTTTTATGTTACACATTTTTT
ATAAGAACACAATATAGGCGTCACTGGCTAAAATATTAAGAATAAGTTAG
AAACATTTTAAGAGTTTTTGGACTCTAAAACACCCTATTTCTTAGGAAAA
CTGACAAAAACACTCTCCAAATGGTGAAAATAAGAACATGTTAATAAAAA
AGAACATTTTTAGGCTTATAAAACTCATAAAAAGAACACTTGAAGGCAAT
TTTGGATGTTATTATGAAAAATAGGGCGTAACCATGAATATGAAAAATAC
AGTGATTGTCGCATTTTCTTTTTTTACCTGTTTTCATTGTTTTTTTTCTG
TCGCGTTTTTTTTATTTGACCCGTTTTTATTTGACCAATTTTTTTTTCGA
AAGCATGCAGCGGTCAGCAATTTTTAAACATCTATTTCCCAGGCATAGTC
TTCCTGGAAAGTTCAATTTGTTGGCCAAAAGTTTCAAAAATCGTATTCCT
AGAAATCCAATTTGTCGAGTAAAAGCTACATCTCCTGGAAAAGGGACACA
GGCTCTTCGACTGCTTCTGTTTTTTGAAGGGGAAGGTGTGTGGGGTTACC
TTAAAGTGTATATTTTCGCGGTTAATTTTAACCCAGAACCGTGTTTCATG
AGTACTACTAATTTTCGCGATCGTTACTTAATTTTTCGTATTAAATTTTG
CGATTCAAAAAGTTGGATTTTTTATAAAAGGAAAAAAAGACTGATTTGCT
TAAAACATAACGTATAAGATAGAAAACTAGTACTTGCGTGTATTTTTTTT
CGAAAATTTAAACCTTAATAAATATTGCGAAACTTAGCCAAAAAAACTCG
CGAAATTAAGTACACGCAAAAATATATACACTTAAGGTATAACTCTATTA
TAACTAACCTTCAAGAAGCAGGTCTTGATTACTTCCTTACTCAGAATCCA
ATTCAAAATGGCGCCTGGGATTTACTTTTGGTGTTGGTCAATTTTTTAAT
TTTCTACAAATTCTCAGTGGCTTTCAAAGGAAAGTTCAAAGTTTTAAATG
TTGTTGATTTAGTCTATTGTAGCTCTGACTTACACCCACAGTGGTAACTG
CTCATATTCATTGACCTAAAGGCTACTAAAGTCTGTTTCGAAAGTTGTAT
AAATTAAACATTGGTTTCACTTTGATGTTTTTATTATTTTTGGTTATTTT
GGTTCAAATATAAACAAAATTATTCCAGGTATGTTTTCTTATCGCGATGT
ACTTGTTTCTATCTCATTGATGATAATCAATGCGTTTTTTCAGAATGATT
ATAACTTAGTGTGTACGAAATGTGTATCAGTGTTTCAACGTCAAAAATGT
TGATTCGAGCACCAAGAAGATGACTAATTTAGTCTTCACTTGTATTGTGG
GATACTTAGACGCTACAGTAGAATTAGAAAGAAAACGTGATAAAAAAAAG
AAAAAAAGAAACCGAGCTGTTCCTCCCTCACAGGAACCAATGTTCCGCCT
CTGAGAATTCCTCTGAAATACAAAAGGTTGTTGTCTAATATCGGAATTCC
GTGAAATTTTTGAACGAAAAAGGGCCGATTCCCCTCTTTCACTAACCGTA
AACCCCCCCCCCAAAAAAAAGTATATGAATCGAAGTAACCCCAATTTGAT
CGAGTTCATTACATTTCTGTTCAGAATTTTGGTTAAGAAAGGTCAGTGAA
TCTTTCTAAAAGCATTTTTTCGATTGGTTTTACTTTTTTAACAGCATGTA
AAAGTGGTGAAATTCTGGGAAGACTAAGTAGAAGTACACGCTTTTCTTTT
TATGAGAATATCTTCTATAAGATTATCAGGGTGAAAATTGAAAATTGTTA
GACTTAATTTGAAACTTTGAGACATTATATTTTAGCTCCCAATGTGCACT
CAAAAGTCTCAAACTCTCAAATTGATCATTTCTCGTGTTTGTATAAAAGT
CAAGTCTAAAAATGTAAGAATACGTTAAGATTATTTCACCCTTAATTTTA
TTGGCGATTTCTTAAAAATACTTGACCCTCATCCAAAGTACACTATTCTT
ACAAAGCGTAATAAGATAAATCCTTGCTTTTTTACCCCTCAAATTTTTTT
ATAGCTCTCGATACAAGAAATGGAAGATCTCAGTAATACATTCTCGAACT
TATCTGAAACTCATAGCCGAGGAATACTTTTGAAAGACACAAATTACAAA
GTCATTCGTGCCGACAAATATTCTATCTATGGAAAAAAGGTGAGCGCATT
GATAAGTTTTCCAAAATAAAAAGGTTGCGAGGCCCTTGCGTGGTCAAGAA
TGTTGATAAATGATATGGTTTCTTTAGTAACTACTGACTTTGAATTCTTG
GCAATCATCAAAAAGTAAACTATGTTTATTAATCAAGCACTTTACACATT
TGAGAAATACAAAAAATTTAATCAAATTTTACCGAAATTTAATAAAGCAA
ATGGTGAAAATTAGTAATCTAATCTCTCGGGTAACTCTAAAAAAATTCTC
TTTCTGCCAAAATTCCTTTTCCTTTAAGGTGATTATTAATCTAGCTTCTA
TACACTATTTCGACCGTAGCCACCTATTGCTGTGTGTGCGGGCATTTTTT
GTCCGTTTTACCACCCTAAAACCGCCCCAGTCTTTTTTTCGCGTCTGAAG
ACAATAGAAAAGAGTGTAAAAAAAGGATTGGATCGAGTTTAAGATGGCAA
ATTAAATAATAAAGTGGCACGTGCCTGACCACGCGACTACGGTCGAAAAA
ATATATTGGTTGGTACACTTTTCCAAAAAGTTTGGAAATAAGATGATGAA
TCTTTACCTAGAAATTTCAAATTTATCACATGATTTTACTTTATTTTAAG
GGAAAAGAAGGGCTTGTAATGATTCGCACTTCAATTTTGATCATTTTGGC
GTTATACTCGGCTGATATGTACCCGAGCATTGTCGTAGAAGCTGTTGAAA
AGTTAGGTAAGTTGAGTTAGTTTATTGTATATTTGGCAATAGTTTCGTAC
TTTAAGACGCTAACCCTAACTAAACCTAACAGGGGGATCAGTAAAAAACC
TTTTGAGTGCATGAGAGTATATATTGTTCAAGAGGTATCGAAAAATCTTG
AAATATCTTTTGAAATATTACTTTTGAAAAAAATTGTGTCGCGAAAATAT
CTGCTCACAAAAATTTATTCACTTTTGATGATTTTCTGAAATTTCGAGAT
TAAAAAAAGTTTTTTTAGTTTTTTTGAAATAATTTTCGAACTTTTTAGGT
GACTATCTTCGCGAAAAGGGAAAGTGA Coding sequence (CDS) from alignment at sc0000042_pilon:1780113..1783889- >XLOC_043260 ID=XLOC_043260|Name=XLOC_043260|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000042_pilon:1780113..1783889- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAATCAAACTCAAACTCTTCTTCAAGAATGTTTAGTTAGTACTGG
TCATGTTGAGTGCTGTGCAATTTTTCGAAGAAAAGATATCCTACTGCGTG
CAAACTCAAATGGCTTTACAATGAATAATCAAACTCAAACTCTTCTTCAA
GAATGTTTAGTTAGTACTGGTCATGTTGAGTGCTGTGCAATTTTTCGAAG
AAAAGATATCCTACTGCGTGCAAACTCAAATGGCTTTACACTCTCGATAC
AAGAAATGGAAGATCTCAGTAATACATTCTCGAACTTATCTGAAACTCAT
AGCCGAGGAATACTTTTGAAAGACACAAATTACAAAGTCATTCGTGCCGA
CAAATATTCTATCTATGGAAAAAAGCTCTCGATACAAGAAATGGAAGATC
TCAGTAATACATTCTCGAACTTATCTGAAACTCATAGCCGAGGAATACTT
TTGAAAGACACAAATTACAAAGTCATTCGTGCCGACAAATATTCTATCTA
TGGAAAAAAGGGAAAAGAAGGGCTTGTAATGATTCGCACTTCAATTTTGA
TCATTTTGGCGTTATACTCGGCTGATATGTACCCGAGCATTGTCGTAGAA
GCTGTTGAAAAGTTAGGGAAAAGAAGGGCTTGTAATGATTCGCACTTCAA
TTTTGATCATTTTGGCGTTATACTCGGCTGATATGTACCCGAGCATTGTC
GTAGAAGCTGTTGAAAAGTTAGGTGACTATCTTCGCGAAAAGGGAAAGTG
AGTGACTATCTTCGCGAAAAGGGAAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1780113..1783889 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 364-390:28 |
| Aaloc | 256-360:428 |
| Aaloc | 121-255:1174 |
| Aaloc | 1-120:3778 |
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