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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1514283..1518749+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043254 ID=XLOC_043254|Name=XLOC_043254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4467bp|location=Sequence derived from alignment at sc0000007_pilon:1514283..1518749+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCACAACAATACGAACGCCTAATAATCAAAGATGGTGTGGTTACAAC
GGAAGTAATTGAAATCTCAGGTACTTATCTATTTATACAGATCTATCGGA
GGTGAATTAGTGTCTCCTTTGAAAAGAAGTCTCTCTCTTTATCTCTCTTT
CATTTATCATGCTAAATTTAAACACCTGGAGTACTGCTATTAGAGTAGTC
CCAAAGCCAAGAAAGTATATTTTAGATACTTTTTTCAGGTCGGAAGTTTG
TCTTGGATGATATCAGAGAAAAGCTGCTGGCGAAACATTCCAATTATATG
AGGGTGAAACCAGACTTGTATTATGACGAAATGACgatggaaaatttaaa
attcgaaTTGGAGGTGAGATTGAAAGAAAAGCTGGACGACACTAAAGATG
CTTCTTATCTTAAAAATCTACACCGAACACGCTCGTTTGCTTGCTGGCAT
GATACCTCCTGTGTCTCGAATGCGTCGCATTTTTTGGTACTAGTTCACGT
GTTGTACGACGAAGCTTTGTTTTACACAGATGATGAGTATGCAGCAAATT
CTAATGGTAAGGATACACCCATAATTACCTATAttcaaattaagtttttc
attgTATTTGGCTTTTGGAAGGATTCGCTAATTGTAGGATGAGTTCACTC
TAAATTAATCAAGTAGTAGTTTCTTTTACTGCGTAATACTTATGTTCTGT
TCTTTACCAATTTATTCTTTAgtcattttgaattatttcttgCGATCAAT
TTTTATTTGTATCATGTTGAAAgtcattaaataaaaaaattatgaatttc
atGACTATGGTTTATGTGGTAATATCCTATAATGCCGGACATTTAATATC
ACTTCTGTTTTCCTAGTACAAAAGTGGTATTTAATGTCTGGCATTGTAAG
ATATTACCACATGAAACATAGCCATTGAGAACATAATTGTTGATATTCCA
CCAACTGACTCTGTTTACTTTTATGCTCCTTTCATTTTCTCACCGTTTCC
ATTTATTGTCCTTAGATTTTGACCCGTTTACACCgtcacatcttttttat
ttgtaaCTGAAACATTTCGACCGATCTAATCAATCAACGaaaaaaaaCTC
CTGtcgtcatttttttcatttctagaCTTATTGgatctttttttgacttt
cggATACTAAGGGGTCTGATATCCATTTTGTGCATTGACAGTTGTACGCA
ATGAAGTAtaatcccgaagggctagaagtcaatctccttgagCGGCTCGA
CTGGtttttaCACaaatcaaacaaaaatATaCCACTCGAAATAAAAGAAT
CTCCTACATTCGATACGTCTTAGAAATACGGCCTTTACTAtttggcttca
ctttttcttgcctcaGAAAGGTTAAAATTCGCTTCTAGCTCTTCGAACAT
TAACTTCACCGACTATAATCCTTTAActtatcgggggaaaaaatattgga
gttttatttattcgggaaaaaatttcgtcacctataaaggcattttcgtc
actttcccccaaccaaatttcaaattcgtcagaCCTTTCATTTAGTCATT
TCACCCaatttccattaaatttccttCACTTCATCTTGTAATTCCCCTAA
TTTTGGTTAATAAAGGTgtgaaaaatttagatttcaattttaattggggt
ttaaaaaattgggcaaaagttttggtcggggataaaaaatcgggtaaaag
ttttagtcgggtgataaaatatcgaggGAAAATTGCGTCgccccttcaaa
attttcgctAAAATGACCAAATATCGGAGCGAAACTTATTAAATTTGTGC
ATTTGCTcattttaaaaaaacaaattgaccTAGTTCGCACCTTTCATTGG
TGACAGGAGAGAATTTAGGAGAGTGAGCATGGGCTTATCATCGGAATTGA
CTTATAACTTGCGCTTAAAATCGGAATCCGAGGGGCTTATATCTACATTT
AGCTTTAAGTAAAgcaaaaaattaacttttaaatTTCGAATTTGCCGATG
GATTAGGaactagcattttaattgtgtTCGGAGCCCGAGATCAAAAAATT
AGGCGgcaacgctatttcgcatctcttcAAACCATGAAATTGGCTTGTTG
TCCgtggaaatcctaccaaaactttgcttcacttttcgataaaggcccaA
TGTACCTACTTCATTTAATTTAAGCTTATTTCctcttttttcgaaatttg
aagctcgggcgagaaattttgacgATTTTAATCGGATTTCCAAAGATCCT
GCTCATGCTTGCATTATTTAGAgccttttcaacaaaaaaagatCTAAGTT
AAAAGCccagaagggctagatttgcggcttttatcgaaaagtgaagccta
ggtttggaaggatatcctaccaaagtcacgtgactaaaatatgcaatttc
gccagtttgagagatgtgaaatagcgtttgccgcctactttttttgatct
cgcgcaccgaaaacaataaaaatgctagatcctattcatcggcacgaaat
ttaaataGAGTCCTTACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCA
ATCTCTAACCTTTCTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCC
GTATTTTTGATGACGGATTGAATCTAGCAATTCCTTTGTTTTCGAGTGAT
ATATTTTTCGAAATTAAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTG
TAAAAACCAGGCGGGTCGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTT
GGCTTCACCAAAAGCTTCAATAAATAGTATCAAGTTCTCGTTTCAAATTG
GAGAGGTCGAAAAAAAATGGGAAAGGTGTatacgaccatgattgtcttAT
TATTACTAGGCCTTTTGGTTGATATTGCTGACATTGTGGAGACCCCGGAA
ATGTACATTCTCGCACGTTGCCCTAGTAATGACCAACAGCTGATGTATAG
CCCGATACGCCTTCAAGATATCAAGAAAATGCACGATAAACCAATGAAGC
ATCGTGGCGTAGAAATTGCGGACAGAATGAGGTTATTCAAGGGTAAGTGC
tttttttCGATCCAACTAAGAATGTGTGGTGGAGTTTcattttccttgaa
aaaaggGGGTGGTGGTATTTAAGAcaattttttcctaaaattcaGCTTTA
TTACCCCTCTGTTTTGCGTCAAacacacgcttttttaaaaggttttgaag
aacatttttctaagttattttttatttgaaatggtCACAAGTAATACATA
AATAAGTACAATAAAATCTTTCACTAGGCGATGCCCCAGCTTGCCAGCTA
GAGGCAGGTCACCAAAAGGGAGGACGATTCTTTTGCTGGTTTTGCCAATT
GGATGGTAACAGAGGAGATGATTTACAACATGTGCTGTATAGTAAAACCA
CATCACTGGATGACAAATGCAGAGAGTTGTTTGCAACGACTGTTGGTCGG
GAACTTCAAAGAGAAGGCGCTGCTCATTATGCTGACCACCtgcaaaaaga
taaaataatatCAGATCTTAATCAGAGGAAGGTCGAGTTTGTTTCACAAA
ACAAGGTTGaacatttgagaaaaattcttgcTGAGGAGATGAAAGGCACA
CAAAGAGTCCCTGCACTGTTGGCCGGGTCCAATCATAAGTCGATGACCGA
GGCAGGTTTATACAATTATGAAGTTCTACCTCTGGATCCTATGCATGCTC
TCAAAGGTCACACGGAAAACTTGTTGGACCAAATTCCAAGGCATTTGAAT
AAGAGGAAAAAACGCACCTTTGACAACACGTTGACAGCTATTTGGAGAGG
GTCTCAACTGAAGCGAGCTCGAGATTACCGTAATGCTCTCAATGAGCTCA
CGATTACACTAAAGAACGGTAAGATCGAAGACtgctttttcaaaatcttg
agaAGCCTTTGTGAGATCCAGGATATCATGTATTCCAGAGAGCGATCACC
TCAGTTGATTTTTCGTTTGTACAACCTCGTCTTCATGCACATCATTTACA
TCAAAGAGGCATTCGATACGATCAAAAAACGAACGACAAGAAAATTTCAC
GGCCAGTACATGCACGAACTCATCGAGGGCTGCCATCAGTTTCGAATAAT
GAGTTTACCATCAGCAAATGTTGAAGAGGAAGAACAaatgttcaaatttt
tgaagcatgCAGCAACTTGGACATCAAACCACCATCCAGAGAATGTCTTG
GATAACGCCTTCGTCAGGATGCAAGTCCGTGATGATTATGCAGATCaaaa
aaacctggtaaaaagaagaaagaaatcaaaatcagcATGTTCAAAATCAG
GCGATCAATTGGACCCACTACCCTCTACTCTGGTTCCTTTTTCATTCATT
AAAAAGCACCCAAGAACTTGGCAGGGTCATCTACAAAGGATCGCTGATTT
CTTGGAGGTTAAAGAAATATGGACGGAAACCAATGATGGAATTACCTTAC
ACGACCTTAAGCCTTTG Coding sequence (CDS) from alignment at sc0000007_pilon:1514283..1518749+ >XLOC_043254 ID=XLOC_043254|Name=XLOC_043254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3522bp|location=Sequence derived from alignment at sc0000007_pilon:1514283..1518749+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCACAACAATACGAACGCCTAATAATCAAAGATGGTGTGGTTACAAC
GGAAGTAATTGAAATCTCAGGTTCCACAACAATACGAACGCCTAATAATC
AAAGATGGTGTGGTTACAACGGAAGTAATTGAAATCTCAGGTCGGAAGTT
TGTCTTGGATGATATCAGAGAAAAGCTGCTGGCGAAACATTCCAATTATA
TGAGGGTGAAACCAGACTTGTATTATGACGAAATGACgatggaaaattta
aaattcgaaTTGGAGGTGAGATTGAAAGAAAAGCTGGACGACACTAAAGA
TGCTTCTTATCTTAAAAATCTACACCGAACACGCTCGTTTGCTTGCTGGC
ATGATACCTCCTGTGTCTCGAATGCGTCGCATTTTTTGGTACTAGTTCAC
GTGTTGTACGACGAAGCTTTGTTTTACACAGATGATGAGTATGCAGCAAA
TTCTAATGGTCGGAAGTTTGTCTTGGATGATATCAGAGAAAAGCTGCTGG
CGAAACATTCCAATTATATGAGGGTGAAACCAGACTTGTATTATGACGAA
ATGACgatggaaaatttaaaattcgaaTTGGAGGTGAGATTGAAAGAAAA
GCTGGACGACACTAAAGATGCTTCTTATCTTAAAAATCTACACCGAACAC
GCTCGTTTGCTTGCTGGCATGATACCTCCTGTGTCTCGAATGCGTCGCAT
TTTTTGGTACTAGTTCACGTGTTGTACGACGAAGCTTTGTTTTACACAGA
TGATGAGTATGCAGCAAATTCTAATGGCCTTTTGGTTGATATTGCTGACA
TTGTGGAGACCCCGGAAATGTACATTCTCGCACGTTGCCCTAGTAATGAC
CAACAGCTGATGTATAGCCCGATACGCCTTCAAGATATCAAGAAAATGCA
CGATAAACCAATGAAGCATCGTGGCGTAGAAATTGCGGACAGAATGAGGT
TATTCAAGGGCCTTTTGGTTGATATTGCTGACATTGTGGAGACCCCGGAA
ATGTACATTCTCGCACGTTGCCCTAGTAATGACCAACAGCTGATGTATAG
CCCGATACGCCTTCAAGATATCAAGAAAATGCACGATAAACCAATGAAGC
ATCGTGGCGTAGAAATTGCGGACAGAATGAGGTTATTCAAGGGCGATGCC
CCAGCTTGCCAGCTAGAGGCAGGTCACCAAAAGGGAGGACGATTCTTTTG
CTGGTTTTGCCAATTGGATGGTAACAGAGGAGATGATTTACAACATGTGC
TGTATAGTAAAACCACATCACTGGATGACAAATGCAGAGAGTTGTTTGCA
ACGACTGTTGGTCGGGAACTTCAAAGAGAAGGCGCTGCTCATTATGCTGA
CCACCtgcaaaaagataaaataatatCAGATCTTAATCAGAGGAAGGTCG
AGTTTGTTTCACAAAACAAGGTTGaacatttgagaaaaattcttgcTGAG
GAGATGAAAGGCACACAAAGAGTCCCTGCACTGTTGGCCGGGTCCAATCA
TAAGTCGATGACCGAGGCAGGTTTATACAATTATGAAGTTCTACCTCTGG
ATCCTATGCATGCTCTCAAAGGTCACACGGAAAACTTGTTGGACCAAATT
CCAAGGCATTTGAATAAGAGGAAAAAACGCACCTTTGACAACACGTTGAC
AGCTATTTGGAGAGGGTCTCAACTGAAGCGAGCTCGAGATTACCGTAATG
CTCTCAATGAGCTCACGATTACACTAAAGAACGGTAAGATCGAAGACtgc
tttttcaaaatcttgagaAGCCTTTGTGAGATCCAGGATATCATGTATTC
CAGAGAGCGATCACCTCAGTTGATTTTTCGTTTGTACAACCTCGTCTTCA
TGCACATCATTTACATCAAAGAGGCATTCGATACGATCAAAAAACGAACG
ACAAGAAAATTTCACGGCCAGTACATGCACGAACTCATCGAGGGCTGCCA
TCAGTTTCGAATAATGAGTTTACCATCAGCAAATGTTGAAGAGGAAGAAC
AaatgttcaaatttttgaagcatgCAGCAACTTGGACATCAAACCACCAT
CCAGAGAATGTCTTGGATAACGCCTTCGTCAGGATGCAAGTCCGTGATGA
TTATGCAGATCaaaaaaacctggtaaaaagaagaaagaaatcaaaatcag
cATGTTCAAAATCAGGCGATCAATTGGACCCACTACCCTCTACTCTGGTT
CCTTTTTCATTCATTAAAAAGCACCCAAGAACTTGGCAGGGTCATCTACA
AAGGATCGCTGATTTCTTGGAGGTTAAAGAAATATGGACGGAAACCAATG
ATGGAATTACCTTACACGACCTTAAGCCTTTGGCGATGCCCCAGCTTGCC
AGCTAGAGGCAGGTCACCAAAAGGGAGGACGATTCTTTTGCTGGTTTTGC
CAATTGGATGGTAACAGAGGAGATGATTTACAACATGTGCTGTATAGTAA
AACCACATCACTGGATGACAAATGCAGAGAGTTGTTTGCAACGACTGTTG
GTCGGGAACTTCAAAGAGAAGGCGCTGCTCATTATGCTGACCACCtgcaa
aaagataaaataatatCAGATCTTAATCAGAGGAAGGTCGAGTTTGTTTC
ACAAAACAAGGTTGaacatttgagaaaaattcttgcTGAGGAGATGAAAG
GCACACAAAGAGTCCCTGCACTGTTGGCCGGGTCCAATCATAAGTCGATG
ACCGAGGCAGGTTTATACAATTATGAAGTTCTACCTCTGGATCCTATGCA
TGCTCTCAAAGGTCACACGGAAAACTTGTTGGACCAAATTCCAAGGCATT
TGAATAAGAGGAAAAAACGCACCTTTGACAACACGTTGACAGCTATTTGG
AGAGGGTCTCAACTGAAGCGAGCTCGAGATTACCGTAATGCTCTCAATGA
GCTCACGATTACACTAAAGAACGGTAAGATCGAAGACtgctttttcaaaa
tcttgagaAGCCTTTGTGAGATCCAGGATATCATGTATTCCAGAGAGCGA
TCACCTCAGTTGATTTTTCGTTTGTACAACCTCGTCTTCATGCACATCAT
TTACATCAAAGAGGCATTCGATACGATCAAAAAACGAACGACAAGAAAAT
TTCACGGCCAGTACATGCACGAACTCATCGAGGGCTGCCATCAGTTTCGA
ATAATGAGTTTACCATCAGCAAATGTTGAAGAGGAAGAACAaatgttcaa
atttttgaagcatgCAGCAACTTGGACATCAAACCACCATCCAGAGAATG
TCTTGGATAACGCCTTCGTCAGGATGCAAGTCCGTGATGATTATGCAGAT
CaaaaaaacctggtaaaaagaagaaagaaatcaaaatcagcATGTTCAAA
ATCAGGCGATCAATTGGACCCACTACCCTCTACTCTGGTTCCTTTTTCAT
TCATTAAAAAGCACCCAAGAACTTGGCAGGGTCATCTACAAAGGATCGCT
GATTTCTTGGAGGTTAAAGAAATATGGACGGAAACCAATGATGGAATTAC
CTTACACGACCTTAAGCCTTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1514283..1518749 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 574-1761:3280 |
| Aaloc | 391-570:2862 |
| Aaloc | 73-387:241 |
| Aaloc | 1-69:1 |
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