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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1517635..1521530+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043253 ID=XLOC_043253|Name=XLOC_043253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3896bp|location=Sequence derived from alignment at sc0000007_pilon:1517635..1521530+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAACAGAGGAGATGATTTACAACATGTGCTGTATAGTAAAACCACA
TCACTGGATGACAAATGCAGAGAGTTGTTTGCAACGACTGTTGGTCGGGA
ACTTCAAAGAGAAGGCGCTGCTCATTATGCTGACCACCtgcaaaaagata
aaataatatCAGATCTTAATCAGAGGAAGGTCGAGTTTGTTTCACAAAAC
AAGGTTGaacatttgagaaaaattcttgcTGAGGAGATGAAAGGCACACA
AAGAGTCCCTGCACTGTTGGCCGGGTCCAATCATAAGTCGATGACCGAGG
CAGGTTTATACAATTATGAAGTTCTACCTCTGGATCCTATGCATGCTCTC
AAAGGTCACACGGAAAACTTGTTGGACCAAATTCCAAGGCATTTGAATAA
GAGGAAAAAACGCACCTTTGACAACACGTTGACAGCTATTTGGAGAGGGT
CTCAACTGAAGCGAGCTCGAGATTACCGTAATGCTCTCAATGAGCTCACG
ATTACACTAAAGAACGGTAAGATCGAAGACtgctttttcaaaatcttgag
aAGCCTTTGTGAGATCCAGGATATCATGTATTCCAGAGAGCGATCACCTC
AGTTGATTTTTCGTTTGTACAACCTCGTCTTCATGCACATCATTTACATC
AAAGAGGCATTCGATACGATCAAAAAACGAACGACAAGAAAATTTCACGG
CCAGTACATGCACGAACTCATCGAGGGCTGCCATCAGTTTCGAATAATGA
GTTTACCATCAGCAAATGTTGAAGAGGAAGAACAaatgttcaaatttttg
aagcatgCAGCAACTTGGACATCAAACCACCATCCAGAGAATGTCTTGGA
TAACGCCTTCGTCAGGATGCAAGTCCGTGATGATTATGCAGATCaaaaaa
acctggtaaaaagaagaaagaaatcaaaatcagcATGTTCAAAATCAGGC
GATCAATTGGACCCACTACCCTCTACTCTGGTTCCTTTTTCATTCATTAA
AAAGCACCCAAGAACTTGGCAGGGTCATCTACAAAGGATCGCTGATTTCT
TGGAGGTTAAAGAAATATGGACGGAAACCAATGATGGAATTACCTTACAC
GACCTTAAGCCTTTGAGCCTCCCGCTAGCTCACTTCAGGTCATCGAcgat
aaaaaatgaagttacCAAATTACAAGGCAAGTACTACTAATATCTCACTT
CTACTTATACGAAATAAAAACCATTGTTTTTGACAATTTCTATATATTTA
TTTGTccgagattttagtaccgacccctgGACAAAAGAAAATTAGCCTAA
TGAAAAGTTTAGCCCCAGCCAGGAATTTCCTCAATctactttaaaaTttt
ttaccaacgaaaaatatttcttcatcTGAAACAGCCTTTATTTTACAGGA
CTGTTGGCACTAATCtgtttaatttttcttcagaTAAATGGAATGATTTA
CTTAAAGAGAAACCCGACATGGTACCAGCAGATAAAGTAATGAATGATGA
AGGGAAATTATACAACATTGGGTCAATTTCAAGATTGCGGAAAGTGACAA
TTGTGTTTGATGGTAATTTTTATGCCTAATTTTAATGTCTTTCTTTAGGT
TCCACTTtactttctttataaaaatattttccttgagGGTACCTTGAAAG
ACAAACTTTTCCAATGTCAGGTGTTGAATGTTGAATGATAGTTGCAATTT
GAATATTTAACATGAAGTTTCTTAATCCATAGAACCAGAGATAGAACCAG
TTAAAATCAACAAAGACAGTTCgaaagaaggagaagaagacagttctgaa
gagagtgatgaagaagacagttttgaagaaagtgatgaagaagtgtgtta
tgaagaaagtgacgaagaagagtgttctgaagaaagtgatgaagaaATTG
CCAAGGAACATGAAGACGGAGAGGATAGATTTGACAAAAGTGAACACAAC
AATTTTGATATAACGATGATTGCTGAAGATGACGGTGAGACTGACTAAAA
ACAATTCTGCTGATATCAGCCaaaaaaaTGGACATAATCTGACATAATAA
AATCTGTCCCACgttcttcaaactttcaaggaatttaaaagtttttttga
atttttcaggcACAACAAACAATGTCGAGGaagcaatgcaaggagaaaac
gAACTCATGAATTTCAACACTTCACTTTTTGGTaagaattaatttcaaaa
tatttcacatCATTAttctattgaaaaaaagttttttttggatcAGATCA
AACAACATACAACAcacacaaaataaattttactgTTGTAAAATCTTAAT
GGGGCTGTAAAGCTTGAATATTGAGAAGATTGCTTTTTATGATAACTATT
TAGAATACAAGTCAGTGGATACATCAATTTTGGACAAAACACCTTCTACT
CTATTCAATGGTCTTAATATCCAGAGTCCTTTGATGCCAGGTAAGCCAAT
AAAGATAATCAATATCGGTTGAAATTCAAAAGGGCTCTTCTATTATCTCT
TATAATCGATTCATAATAATTataatcattattttttaataGCACCATAC
TCCAAAGTCAATGACATACCAAAAACGCCTTCGTCAAAGCCCATCATGAC
TACATGTGAGtaataaaagtttataatttgaGATAATATTTGATATCATT
CATAACTTTGTCTTAATAATTATTgaagtttcttttttatgcttatagCT
ACACCTCAAgtaccaaaaccatcaaaatcTTTGTTCGGGGATAGTGAGAG
TAGTAAGTACAATTTATGTACTAGTTGTTGTTATAATTTATATTTGGCta
gattttgaatttcttgaaaaaaaaagatgtatttattttttcaacattac
actcaaaaattttcagatgcTTATACTGTTTCCTCTTTTTTCACAGGCAG
CAGAAACaaaaaaaGGGAAGTGTTACAATTGCGAAgacagaaaataacaa
caaagtCCATTTTGACATCACTCTTTGGAAATGATACTCTAGCAAATCAA
TACGAGGCTTGCAAGTTGAAGGATAACAAAGAGGACTTGAAAGACTTAGT
AGCTCAAATCCAGATCAAATTGACTCTTCTTTGGGATGATTCTAAAGAAA
AACTCAGAACCATGGAGATGGATACTATCAAATCTGATAGCACTTACTTG
TTAAGACCAACAGATGATAAGGACTACTTGGTGGTGCGCAATGTTTTGTC
ACTGATCAAAAAGCTAGAAGACAAGTTTAATCTAAATCTTGAATAGGACt
ggcaaatattttttaattcattctaGTAAGCTCTTTTTCATCCAAAATGT
ATCATGTTCTCGTTGGTTTTCAATGTAATACCTCTTTATTACATGAACAA
ATCAGAATTTTAGTCAATATTCTTAATAATATAATTAGTTGTTAACAAAA
TAAGCACtttcctactgtttttaccagGATTATATAGGTGGTTTAATATC
AATAGTGTATGAACAAAAAGCCTGAATTACAGCAGTAAGTTTGGTCTATA
attttaaaagagaccataaaatttcattttagtccaattatttatcattt
tttattcaCTCTGATTCACTCAACCCTTTTTAAATAGTCCATTTTAATTT
ACTGGTCCTTTCATATTTATATTTCACAAAGGACTGTATAGATTATCTTT
CATAGaggttatttatttttattactttcataatttttatacAAATCTTA
GTAAGTTCCATATTATACTTTCCTAtagatttttcacaatttttactGCA
TCATTTCAAATGTAGCAATTCATAATGTTGTTATTACAAACCTCAATTTA
TTGTTAAATTTTATAGTATGTGTTCTTACCTTTACGTTATTTGTTCAATG
ATGGAggttttgttcttctttttgcAAGATCATCCAAATTTCTGTT Coding sequence (CDS) from alignment at sc0000007_pilon:1517635..1521530+ >XLOC_043253 ID=XLOC_043253|Name=XLOC_043253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1382bp|location=Sequence derived from alignment at sc0000007_pilon:1517635..1521530+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAACAGAGGAGATGATTTACAACATGTGCTGTATAGTAAAACCACA
TCACTGGATGACAAATGCAGAGAGTTGTTTGCAACGACTGTTGGTCGGGA
ACTTCAAAGAGAAGGCGCTGCTCATTATGCTGACCACCtgcaaaaaATGG
TAACAGAGGAGATGATTTACAACATGTGCTGTATAGTAAAACCACATCAC
TGGATGACAAATGCAGAGAGTTGTTTGCAACGACTGTTGGTCGGGAACTT
CAAAGAGAAGGCGCTGCTCATTATGCTGACCACCtgcaaaaaCACGTTGA
CAGCTATTTGGAGAGGGTCTCAACTGAAGCGAGCTCGAGATTACCGTAAT
GCTCTCAATGAGCTCACGATTACACTAAAGAACGGTAAGATCGAAGACtg
ctttttcaaaatcttgagaAGCCTTTGTGAGATCCAGGATATCATGTATT
CCAGAGAGCGATCACCTCAGTTGATTTTTCGTTTGTACAACCTCGTCTTC
ATGCACATCATTTACATCAAAGAGGCATTCGATACGATCAAAAAACGAAC
GACAAGAAAATTTCACGGCCAGTACATGCACGAACTCATCGAGGGCTGCC
ATCAGTTTCGAATAATGAGTTTACCATCAGCAAATGTTGAAGAGGAAGAA
CAaatgttcaaatttttgaagcatgCAGCAACTTGGACATCAAACCACCA
TCCAGAGAATGTCTTGGATAACGCCTTCGTCAGGATGCAAGTCCGTGATG
ATTATGCAGATCaaaaaaacctgCACGTTGACAGCTATTTGGAGAGGGTC
TCAACTGAAGCGAGCTCGAGATTACCGTAATGCTCTCAATGAGCTCACGA
TTACACTAAAGAACGGTAAGATCGAAGACtgctttttcaaaatcttgaga
AGCCTTTGTGAGATCCAGGATATCATGTATTCCAGAGAGCGATCACCTCA
GTTGATTTTTCGTTTGTACAACCTCGTCTTCATGCACATCATTTACATCA
AAGAGGCATTCGATACGATCAAAAAACGAACGACAAGAAAATTTCACGGC
CAGTACATGCACGAACTCATCGAGGGCTGCCATCAGTTTCGAATAATGAG
TTTACCATCAGCAAATGTTGAAGAGGAAGAACAaatgttcaaatttttga
agcatgCAGCAACTTGGACATCAAACCACCATCCAGAGAATGTCTTGGAT
AACGCCTTCGTCAGGATGCAAGTCCGTGATGATTATGCAGATCaaaaaaa
cctgTACGTTATTTGTTCAATGATGGAggttttgttcttctttttgcAAG
ATCATCCAAATTTCTGTTTACGTTATTTGTTCAATGATGGAggttttgtt
cttctttttgcAAGATCATCCAAATTTCTGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1517635..1521530 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-690:3861 |
| Aaloc | 628-654:3833 |
| Aaloc | 148-627:426 |
| Aaloc | 1-144:1 |
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