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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000021_pilon:855555..860131+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043230 ID=XLOC_043230|Name=XLOC_043230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4577bp|location=Sequence derived from alignment at sc0000021_pilon:855555..860131+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAAGAAGCTCAAACGACGAACGAGAACAATCCGGGTGAACGTCCGGA
CACTGTTTATATCGGACACTTACCAACAAAATGGTTTGTTGAGACTGATC
GAGATAATAAACCTTCGGAACTTGTTGTTGCGGCTGTGTTTTCAAAATTC
GGGGAAGTCCGGGCAGTTGACATCCCGAATAATGATCCTTACCGGGAACG
TATAACGATGTTGGCTGAAGCAAAGGAGAATAAGGATAACCCGGAAAAAT
CGGTTCCCGTTTTAGAAGCGGCTTCAGCTGCTGCGAGTGGGTTTAAAGTT
TTCTCGCACAATTCGAACATTCATTTCGACTGTTACATCCAATATATGGA
TTACACAGGGTTCGCCAAATGTATGAAACAGCTACGAGCCAAAAAACTAT
TATTTATGATCGAGGACGAAAAGGGAGCTACGGCCAGCGTAGATGTTGAT
TTTGACAAAACACAACATATgagtgaaaaaaatatcaagagACGGAACCG
ACGCCGCGAACGTCTGATACGTACGGACGTGGAACAAGAAGAGACGAGAC
GTCGTGAGCAGGAGGAAAGAGAACGTAAAGACGAGATCGAACGTCTTGAA
GCACGTCGTCAACAGTTACTGGAATTAAAAGAAGTCCAAGAGCTGTTACA
AGCCAAAGAACAACGCCGCGCTTTTCGGGAAGaaaaacgtaaacagaaac
gggaagagaaacggacaatcgaaagacaacagaaagaacgagaaaagaaa
acaatagagCTGACCGAAGCCATGAAAGTAAGTAATAATCTGGTTTAATA
AGAAATCAATATCATTCATTCCTCTGGTATGATTACCttttttggcggga
aattaatttttgtgattggtacaatccttttattttcctagattttttgT
GAAGGATGTACTTTGAAGAgattagcgaggttaagtatcaaagataaatc
aacGCGACGAACGAACGGGATTTGACCcacaacctgcagtaaacatgtgg
acCTGCATTTtatagaatccaggctaaaacagCTGAAGAacgaaaaacct
tgaaaatcttcgTTGTTGAACAAAGAAGATATAACATCTACTTTGCTACC
CTTACCATCTTGCAGAGAAAAGGTCCGTACGTCGcgtagatttatctttg
atacttaacctccctagtAACTTTTGTCGTAGTCACTTAAAAGGCGAAAA
TTAATAGTTCCGCGAAATTAGTTTGAGGTAATAGGTAAGAggtaatcaaa
attaaattgaattatAATTAGACAAATTGATCGGAATTACTTTTCAACAA
AATACGAAACCACCTGCTCCAAACACAAATAAATCACGATCGTCCCTTAC
TGCGATCGAGCGTTTCAGATTGTTTGTATTTGGTTAAATAACAAATGCCT
CGCTTATTTAAAGGTCCAACGTAAAGAAGAGGCAGTCGCCATAGTAACCG
AACTCTTGACTCGAATAGCCAAGCGTAAAGAAGAGGACGAGATCGCAGAG
GCTAGACGACAAGCGGAGATGTTATTGAGgaaacaaattgaagagaagaa
aaggaaattagacgaagaaaagaagaaagaagaggagttgaagaagaaac
aagaaatgagtttagacgacgaagaaaaagaactcaaaaaaCGGTAAACA
CTTTTCTCCTTTATTCATTCAATCTTTCGTGTTTTCTTCGTCCTatcggt
tttttttttggttttttggcccagcgctagcgatagggcctttcatttgc
aactttccgtccgTCCTTCCGTATGTCcttccgttttggtagaaacggcg
cttaaaaccagtaacgtactttttaattttaccgtttggagagggaaaag
gtttctaaagtcggatactggctataaaagatatattttctgattccgcg
ctccttcaaaaaaaattttcaaaacaaaacaagatggcggtcgaagcgag
gaggttgattcatactttcttgaacattttctttgctttagtggtcaaga
gactttcaaaccaaagatattttgtaatgattttctttataaaccttttt
caacattctgccatatcttaaagtctttgctcaagttttcataaaatttt
atgagtgaaaattctacattaaatcactttcatttttagtttcttgtttt
caaaaagactttatttttaggaaataatggcttctgatatagaaataaat
aaactgaaatgcagctcatgtgtaaatttgaataagattggaactttttc
cttgatgctacacaagaaaacagtcacttctggatctgtcgcaaaCAACG
GTcagtggtgggacgtggtatgattttcaaactcaacacagaattatttc
aaataagatGATTATggaataccgtgagattgggtaacttgcatcagtgg
aggctaacatgcatagccctcaaatgaatgacctggctggtcattaaaat
acaactacgcagctccgcttgcatctttactctaccatttttgttttgat
ttaactttgtattttaatgaccagccaggtctttcatttgagggctatgc
atgttagcgtccactgatgcaagttacccaatctcacggtatgttagcgg
agactaaaatgcagctcgtgtgtaaatttgaacaagaatttttctggttt
acggtctggtccaactaacatgcctgtagggatatttctccctccatatg
tgagtgcacctaattcgTTAAAAAAGCGCCCACTCGCTAACTAAGCAGAA
TATTCCTggggatttttttatatttttctatggacGCATAATTTATGGGA
AAAGCTGACCttatgaaaaaaagataaacaaatgaaaatgaaaacacagg
ttcatttctaaacaaaatggccactggaaaggagcctttttaaaatgtgg
ctgatgttttgatgtagtttaaagtagttttgaaagttttttgagtttgt
aaaataggttttatggtaagttaattacgtgtgtctgcctgggttttgat
agtctgtcaacaagggttcactcacaggcagtatcgaacaaactgtaccc
gatttttttagtTACCAGGTAAGATtttgttttctgaaattttgagtctg
gatacccaggctagaatgttattggaaagttgaatgtagttgaagaaatt
ttcgcgaggggggggTCCGCTGCTAAGGCCTgggtaaaatattttattgg
ccAAAGACTATGACTACAGACTAAAAGGTACACGAGAGCATTCAACCGGG
TGAACCTGCGCCTGTGTAGGCccggttggtaggagaccattcaataatat
tcaagcgtctaaccaatgagaagtaccgcagtgattttgaattttttttt
tcctgtcttcactttgatccatgtcaacggggtcatacatttgctgtttt
gcatgctcgttttcaacacgttacttttcgctgggccttcacgcccaacg
ggcttcttgtttggATTTTAGAAGGGGCATTTATTCTGAGAGATCGTTTA
TGAAATAATTTGTAACCAAGGGTGACTGAATGTGAAAACTTGTTTGACTG
TTCGTTATTTTTTGAGTGCAAATGTgtcttttaaaaattacagaAGTCGG
AAAACTTTAAGGATagcagggtgtctacgggaccttgaaaagcTTGAAAA
TGAACGTGCCATACATGGTGGGCAAAAAAGTGACGAGACTAAAATGTGCT
TCTTGAAGAACAATTGGTGCCATTGAAATTCGAAAACTTTGGCAGTTTGT
TTTTGTCTTTGTTACACATCCCTGAAGACAATATatcatagtttctaccc
cccccccccttcctcTCGAATTTTGATGAAACCCAAACAGGAAGGTTTTG
AAAGTTCCTAAGTTGGGGTTGCCATTTTAAGGGGAGGGGGtctttagaaa
atcaagcagaAAAATTCCAAATAGGGGAGTATCTTGAACCCTCTAGAAAT
TATGTCTATCAAAGGTATGTCTAGGTGCTTAGCACAATTAACAAAAGAGA
ACTGGCTCTGTTAAAATATGTATAATCTCTTATGGCGATGTCTACTACTA
GTATGTTACGAAACATTTCTGAGAGCCATGCCAACTgagtataaaaaaaa
acttgaaaaatatcaaaacatttgccaaaaaaccttgaaaacacacttaa
atagttaaaaatgacccaaaaaccttgaaaaccttgaaaagcctgagaaa
aaaatccgtagacaccctggatgggtgtttaaaagaaggggacgTTTATT
CGGAGTAATAAGGTATAAATATAACGAATTCGAAGGACCCTGTAGAATTC
GCGCCAAAAGCTTTTAAACTTCCCTTTAAAATACTGTTTGATTTTTAAGT
TCCATTCCTCTCTCCTCTCCAGGCTGAAGAAGATCATGATggcaaagaaa
caaaaacagaaagacaaaaagaaacagccaaagGGCGGTGGCGGAGGAGC
TAATGATGAACCACCTTCAAAGAAGACCAAGCGAAGTTCAAAGAAGACAT
CCTCATCGGGGAACCCCCAGGGTGGTAGTTCATCAAAGACGTCATCGAGC
TCAAGTCGAAGAAAGCGTGATCGATAA Coding sequence (CDS) from alignment at sc0000021_pilon:855555..860131+ >XLOC_043230 ID=XLOC_043230|Name=XLOC_043230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2424bp|location=Sequence derived from alignment at sc0000021_pilon:855555..860131+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAAGAAGCTCAAACGACGAACGAGAACAATCCGGGTGAACGTCCGGA
CACTGTTTATATCGGACACTTACCAACAAAATGGTTTGTTGAGACTGATC
GAGATAATAAACCTTCGGAACTTGTTGTTGCGGCTGTGTTTTCAAAATTC
GGGGAAGTCCGGGCAGTTGACATCCCGAATAATGATCCTTACCGGGAACG
TATAACGATGTTGGCTGAAGCAAAGGAGAATAAGGATAACCCGGAAAAAT
CGGTTCCCGTTTTAGAAGCGGCTTCAGCTGCTGCGAGTGGGTTTAAAGTT
TTCTCGCACAATTCGAACATTCATTTCGACTGTTACATCCAATATATGGA
TTACACAGGGTTCGCCAAATGTATGAAACAGCTACGAGCCAAAAAACTAT
TATTTATGATCGAGGACGAAAAGGGAGCTACGGCCAGCGTAGATGTTGAT
TTTGACAAAACACAACATATgagtgaaaaaaatatcaagagACGGAACCG
ACGCCGCGAACGTCTGATACGTACGGACGTGGAACAAGAAGAGACGAGAC
GTCGTGAGCAGGAGGAAAGAGAACGTAAAGACGAGATCGAACGTCTTGAA
GCACGTCGTCAACAGTTACTGGAATTAAAAGAAGTCCAAGAGCTGTTACA
AGCCAAAGAACAACGCCGCGCTTTTCGGGAAGaaaaacgtaaacagaaac
gggaagagaaacggacaatcgaaagacaacagaaagaacgagaaaagaaa
acaatagagCTGACCGAAGCCATGAAATTCAAAGAAGCTCAAACGACGAA
CGAGAACAATCCGGGTGAACGTCCGGACACTGTTTATATCGGACACTTAC
CAACAAAATGGTTTGTTGAGACTGATCGAGATAATAAACCTTCGGAACTT
GTTGTTGCGGCTGTGTTTTCAAAATTCGGGGAAGTCCGGGCAGTTGACAT
CCCGAATAATGATCCTTACCGGGAACGTATAACGATGTTGGCTGAAGCAA
AGGAGAATAAGGATAACCCGGAAAAATCGGTTCCCGTTTTAGAAGCGGCT
TCAGCTGCTGCGAGTGGGTTTAAAGTTTTCTCGCACAATTCGAACATTCA
TTTCGACTGTTACATCCAATATATGGATTACACAGGGTTCGCCAAATGTA
TGAAACAGCTACGAGCCAAAAAACTATTATTTATGATCGAGGACGAAAAG
GGAGCTACGGCCAGCGTAGATGTTGATTTTGACAAAACACAACATATgag
tgaaaaaaatatcaagagACGGAACCGACGCCGCGAACGTCTGATACGTA
CGGACGTGGAACAAGAAGAGACGAGACGTCGTGAGCAGGAGGAAAGAGAA
CGTAAAGACGAGATCGAACGTCTTGAAGCACGTCGTCAACAGTTACTGGA
ATTAAAAGAAGTCCAAGAGCTGTTACAAGCCAAAGAACAACGCCGCGCTT
TTCGGGAAGaaaaacgtaaacagaaacgggaagagaaacggacaatcgaa
agacaacagaaagaacgagaaaagaaaacaatagagCTGACCGAAGCCAT
GAAAGTCCAACGTAAAGAAGAGGCAGTCGCCATAGTAACCGAACTCTTGA
CTCGAATAGCCAAGCGTAAAGAAGAGGACGAGATCGCAGAGGCTAGACGA
CAAGCGGAGATGTTATTGAGgaaacaaattgaagagaagaaaaggaaatt
agacgaagaaaagaagaaagaagaggagttgaagaagaaacaagaaatga
gtttagacgacgaagaaaaagaactcaaaaaaCGGTCCAACGTAAAGAAG
AGGCAGTCGCCATAGTAACCGAACTCTTGACTCGAATAGCCAAGCGTAAA
GAAGAGGACGAGATCGCAGAGGCTAGACGACAAGCGGAGATGTTATTGAG
gaaacaaattgaagagaagaaaaggaaattagacgaagaaaagaagaaag
aagaggagttgaagaagaaacaagaaatgagtttagacgacgaagaaaaa
gaactcaaaaaaCGGCTGAAGAAGATCATGATggcaaagaaacaaaaaca
gaaagacaaaaagaaacagccaaagGGCGGTGGCGGAGGAGCTAATGATG
AACCACCTTCAAAGAAGACCAAGCGAAGTTCAAAGAAGACATCCTCATCG
GGGAACCCCCAGGGTGGTAGTTCATCAAAGACGTCATCGAGCTCAAGTCG
AAGAAAGCGTGATCGATAAGCTGAAGAAGATCATGATggcaaagaaacaa
aaacagaaagacaaaaagaaacagccaaagGGCGGTGGCGGAGGAGCTAA
TGATGAACCACCTTCAAAGAAGACCAAGCGAAGTTCAAAGAAGACATCCT
CATCGGGGAACCCCCAGGGTGGTAGTTCATCAAAGACGTCATCGAGCTCA
AGTCGAAGAAAGCGTGATCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021_pilon | genome | sc0000021_pilon:855555..860131 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1009-1212:4374 |
| Aaloc | 778-1005:1414 |
| Aaloc | 1-777:1 |
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