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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000021_pilon:864482..869717+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043229 ID=XLOC_043229|Name=XLOC_043229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5236bp|location=Sequence derived from alignment at sc0000021_pilon:864482..869717+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTGTGCTAAGAAGGTGGTCAAGAAAATTGCTGGAGAACACACCAA
GTGTTGTATAACTAATCCTTATGATGAACGAAGGGACGCTTGTTGTAATA
AAAAGGTCAGTAAAAAGGTTTTATATTAGAACCAGTAATTTTTCATTAAG
ACTTGGTTGTTCTTATGATTAATGAAGTTCTTTCTAGATGTATTTTATGT
GAAAGATATACTTAAGTGAAAAGCTTGAGGCATCTAGTCACCCTCTAACG
AGAAAGTTTCCTGGTATGAGAACAAATTAAAGAGATTCTATCAGGAGAAT
ATAGGGTGACAAACAGACCAGTGAGCATAAGCATTTCAATTTTGGTTTAT
TATACTCATCAGATtttcgtacacgttttttataagaacatcaaattttt
taaagccttcggatgttcttaactttttgagttttaagcttaaaagtgtt
cttaacatgtttttattttgaccaatttgtgagtattttttaccattttc
caagaaatagggtgtttttgagtctacACAGCCTAAAAAtgatcttaact
tgttcttaaatttttggccatcgacgccttatgttcttatatagtttgtt
catataaaaaacgtgtactgcaACCTGACTGAGCAGATCGAATAGCAAAG
CGCCTCACCGCCGCATTAAACTAACTCTGTCGCTAACTGAAAGATGTAAA
GAAAGTGATGAAGTGATCTGCCGATCAAAATACTGTAGCGATTATGTAAT
AAAAACTTTGTTTTCGCTATATAGATTATTCCCAAGATACCGGGCCGCTC
AGAATGCTGTCATGGCCGTATGATTGACCCACGCAAAGAATTCTGTTGCg
attttaaaatccaaaaacGAAAATTTGGCAAGTCTACAGGTAGGTTTCTG
TCTCCATTCTTGCTATCGAGAAACTCTTTATCATTTCATTGACAGAAAAT
TACAGTAgaacctccaattagcggacactctaaaaggcagacacctccaa
ttagcggacactctaaaaggcagaACCTCGACacctgattagcggacaaa
atatttttccccgccgtttcctagtcaaatccttataaaaaagtctccaa
aaggcggacactcaattagcggacacaTCCATTTAGCGGACAAAAGTTTT
TGCAAGGAATggtcaaaaacctgtttttttttctccaattagcggacacc
gaGGAAAACATAGTTTCAGACATTAAGATACAAGTAATAAGTGattttaa
accatttatttcaaacatttttttgttttgtttttcaaaattttgtttac
aaagattcagtttttcctttATCTAGTTGATAAGCTTTCCTGTGCAAGCT
CTTTAGGGAAATGCCTAAAACCATAATTTCATGTTTGCGACCCCCTAGTA
CGGtttaatttcgaaatttgagcctgaaacTCAAAACCCTCCAAAAGGCA
GACACCTCTAATTAGTGGACACTAATCCgattccccgatggtgtccgcta
attagaggttccactgatGATAAAGAGCATAACCTTACCGGAAAAAAGGC
GTGCACTTACTTTTTGCTCAATCATTCCGGTGAACAATCCAGCTTTCGCC
ATCATAAGTTATGTAGTCCGATTTATTCCGAGTTTcaatttactattttt
ccccTATAAAGGTTGTTGTCGACTTGGCTTATGGAAGTACACCATGTATA
ACACCGACTCTCATATATGTTGCGCCCGTGAGTTACGCCCTCGATTTACG
AAATACGCCCGTAGACATGAACGTGAGGAGGCTAAGAAGAGAATCAGCTG
TTGTAACCAGGCTGCTTATGATACTAAGCATGAAATTTGTTGTGGATTAA
GAGTGAgtttttttagggaaaaattaaacttttagataactttaaattta
atcaaagaCGGAAGCTTAacgaaaaaaagttaataacaCAACGGTCTAAA
TTGTACGAAAACAGATCCGGTAGATAGAGAtggatattcccatgttttct
TCATAGCTGGGAATTtgaattcaattgttttcaagTGGATGTTATTGTGT
CATGGTTGCTAGGTCTACCggaaatgtctttaaaaactaGGTAAAGTCTT
GTCGATAGAAAAGGCTAGAATTGGCATactagtagggggaattttgttag
attttttgaaatcgctcgatttttttgttagaagcacttgttatacattt
ttggaaacttcaaccttagagaaatcgaaattacgatgtttccaattttt
tttcggacactttggtgtaattttcggacaaatatgacggtctcaggcaa
aaaaaatagggtcaaaaatggatgaagatttcagcttgagaaaacggaga
cctgttgtttatttttggaaagctctcaaaaaaattaggattagagatat
attgcaagaataggtgatttctgtacctaactcgagatattaacccatTG
AAAAacccgtgtttttcagccagaaacagctgttttgtccagtttttgcg
ctttttgaagctcaatatctcgagttaggtactgaaatcacctattcttg
caatatatctctaatcctaattttttgggagctttccaaaaatatacaac
acggtttccgttttctcaagctaaaatttcattaatttttgaccctatga
tttttgcctgagaccgtcatatttgtccgaaaatcacaccaaagcgtcca
aaaaaaaattagaaacatcgtaatttcgatttctctaaggttgaagtttc
caaaaatgtataacaagtgcttctaacaaaacaatcgagcgattttacaa
aatgccctctaaagtctgtctcgaaataatttgcagctggagataaaaat
agctgtaacttttgatagaattcgaatcaagatgcgattttgtgctcgtt
aaaaagatattcgtgagtggaatattatcaagtaaaaaatttgagaaaaa
aaaggaaaataaaaatgaaaaatgaagaagaaaaaaatcaacttcttgta
gaaatgtggtataattaccattttcacaggagtgactcttcaatcttaga
tcatcatcaCTGTCAAAAAATTTTTCAAAAATATTCATTCAATCAAAAGA
TATCAAACTAAGTTTATTGCTGGTTGACTCTATAAACACTATAAAGTAGT
AAAAAACGACAAAAAAACAGCCTTTTGTCGATCAACCAGCAATAAACTTT
GTTCGATATCTTTTGATTGAATGAATATTTTTGAAAAATTTTTTGACACt
gatgatgatctaagattgaagagtcactcctgtgaaaatggtaattatac
cacatttctacaagaagttgatttttttcttcttcatttttcattttcat
tttccttttttttctcaaatattttacttcataatattccacttgcaaat
atctttttaacgagcacaaaatcgcatcttgattcgaattctatcaaaag
ttacagctatttttgtctccagctgcaaattatttcgagacagactttac
tatacctttttggaaaaaatatggaaTTAAGCAATTGCGAATAGTAAACT
TTCTGGAAATAAGGAACTTTAATCCTGGCATTTGAAATTCCTAAAGATTT
CTGCTCCTTTCGCTCGCAACCAAATCTTTAATTATATTACTTCTTGCTTT
CTACACCTTAGGTGCATAAACGAAAGAACCGTGCTGAACGCTGTTGCGGA
TCAAGAACATACGACCGATCTCGTTATATTTGCTGTGATGGAAGAAAATA
CAGATTTAACAGAAAGAAATTGGTCGAACAGAGAGGTTGGTTCtaatcaa
tgaagtataagcccggagagctaaaatcaaatctttaacttttctcagac
aagaaaaagtgaagccttagaaTATACGCCGTATTTTTGGCGACGGATTG
GATTTATCGATTTGTTTGTTGTGGAGTGGTATATTTTTAAATCtagtgga
attttttttttcaatctggaatttgtataaaaactacACGGGCCGCTGAA
GGCCGCgtaactttggtaggatttaaaTGGCTTCAAATCTTATCATGGAT
ATTCGATTCTAGCTTGTAGTTCATTGATTCTAATCATCCTAGCAGACTAT
CTATTCTGATTGTGTCAAGATCTGTCAAGATCGCCTtcgttttgtttaaa
aaacattgaatttttgttaatgattttttttgacaaaaattgacaaaaaa
atcttttctgtCTAATAATGCTGGACAGAAAGTCGGCCATCTAATCTAAA
GcttattcttttaaaattcgTAAGTTATATAATCATATTATTCATAGACA
AAGGTTCACTCATTGAATCTTACAATACAAGGACTTAtctatgttgtttt
tttctaatttaaggGAATACTTATTGCTGTGGAAAACGAAAATACGATAG
ACGAAGAGCTCAATGTATATTGGCCAAGAAGAACTATAAAATAGTGTCAC
TCAATTGGAAAAAACCGAAAACCCCAAACAAGTCAAATAAGATACCGTCA
ATTGAAATCTTCTTAGCTGGAACAACATCAAAACCATTCAAGCCTGAAGT
CTTCACGCTACCAACCGTAGATCCAGACTTTGACCCGTTTGGCGCTTGGA
ATAAGAAAACGACGAGCAGACCGAAAATTCTGAGTAAGAAGTCGGACCCG
TTCGTTCTACCAACGTTCGATCCGAATGGTGGCTTGGACCCCTTTGAAGC
gtggaaaaattccaaaaaaacgaCGCCGCGCCCTAACACTACTCCAAACC
CGTTTGTGCTACCAAACCTCGGAACATTGGACCCCTTTGAAGCCTGGGCA
AACAAGAAAACGACACACAGCCCAAACACTACTCCGAACCCGTTTGCGCT
ACCAAACCTCGGAACATTGGACCCATTTGAAGCCTGGGCAAACAAGAAAA
CGACGCATAGCCTGAACACCACTCCAAACCCGTTTGTGCTACCAAACCTC
GGAACATTGGACCCCTTTGAAGCCTGggcaaacaagaaaacgaCGCGTAG
CCCAAACACCACTCCAAACCCGTTTGTTGCTACCAGATTTCGGAAAACTC
GACCCATTTGCTGAATGGTCGAACAAAGAAACCTCTATCAAAACGACTCG
TCCATCTCGTTTTATTGCCCCAAACTATCTTaaagaaattgctaaaaacg
cCAATAAAGACAAAACACACTCTCTATTGGAGCTTGACCTCTTAAAAGAA
CTTGATAGGTTTGAGGGTAAGAACGCCCGCGGTTAA Coding sequence (CDS) from alignment at sc0000021_pilon:864482..869717+ >XLOC_043229 ID=XLOC_043229|Name=XLOC_043229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2738bp|location=Sequence derived from alignment at sc0000021_pilon:864482..869717+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTGTGCTAAGAAGGTGGTCAAGAAAATTGCTGGAGAACACACCAA
GTGTTGTATAACTAATCCTTATGATGAACGAAGGGACGCTTGTTGTAATA
AAAAGATGTGTTGTGCTAAGAAGGTGGTCAAGAAAATTGCTGGAGAACAC
ACCAAGTGTTGTATAACTAATCCTTATGATGAACGAAGGGACGCTTGTTG
TAATAAAAAGATTATTCCCAAGATACCGGGCCGCTCAGAATGCTGTCATG
GCCGTATGATTGACCCACGCAAAGAATTCTGTTGCgattttaaaatccaa
aaacGAAAATTTGGCAAGTCTACAGATTATTCCCAAGATACCGGGCCGCT
CAGAATGCTGTCATGGCCGTATGATTGACCCACGCAAAGAATTCTGTTGC
gattttaaaatccaaaaacGAAAATTTGGCAAGTCTACAGGTTGTTGTCG
ACTTGGCTTATGGAAGTACACCATGTATAACACCGACTCTCATATATGTT
GCGCCCGTGAGTTACGCCCTCGATTTACGAAATACGCCCGTAGACATGAA
CGTGAGGAGGCTAAGAAGAGAATCAGCTGTTGTAACCAGGCTGCTTATGA
TACTAAGCATGAAATTTGTTGTGGATTAAGAGTTGTTGTCGACTTGGCTT
ATGGAAGTACACCATGTATAACACCGACTCTCATATATGTTGCGCCCGTG
AGTTACGCCCTCGATTTACGAAATACGCCCGTAGACATGAACGTGAGGAG
GCTAAGAAGAGAATCAGCTGTTGTAACCAGGCTGCTTATGATACTAAGCA
TGAAATTTGTTGTGGATTAAGAGTGCATAAACGAAAGAACCGTGCTGAAC
GCTGTTGCGGATCAAGAACATACGACCGATCTCGTTATATTTGCTGTGAT
GGAAGAAAATACAGATTTAACAGAAAGAAATTGGTCGAACAGAGAGGTGC
ATAAACGAAAGAACCGTGCTGAACGCTGTTGCGGATCAAGAACATACGAC
CGATCTCGTTATATTTGCTGTGATGGAAGAAAATACAGATTTAACAGAAA
GAAATTGGTCGAACAGAGAGgGAATACTTATTGCTGTGGAAAACGAAAAT
ACGATAGACGAAGAGCTCAATGTATATTGGCCAAGAAGAACTATAAAATA
GTGTCACTCAATTGGAAAAAACCGAAAACCCCAAACAAGTCAAATAAGAT
ACCGTCAATTGAAATCTTCTTAGCTGGAACAACATCAAAACCATTCAAGC
CTGAAGTCTTCACGCTACCAACCGTAGATCCAGACTTTGACCCGTTTGGC
GCTTGGAATAAGAAAACGACGAGCAGACCGgGAATACTTATTGCTGTGGA
AAACGAAAATACGATAGACGAAGAGCTCAATGTATATTGGCCAAGAAGAA
CTATAAAATAGTGTCACTCAATTGGAAAAAACCGAAAACCCCAAACAAGT
CAAATAAGATACCGTCAATTGAAATCTTCTTAGCTGGAACAACATCAAAA
CCATTCAAGCCTGAAGTCTTCACGCTACCAACCGTAGATCCAGACTTTGA
CCCGTTTGGCGCTTGGAATAAGAAAACGACGAGCAGACCGACGTTCGATC
CGAATGGTGGCTTGGACCCCTTTGAAGCgtggaaaaattccaaaaaaacg
aCGCCGCGCCCTAACACTACTCCAAACCCGTTTGTGCTACCAAACCTCGG
AACATTGGACCCCTTTGAAGCCTGGGCAAACAAGAAAACGACACACAGCC
CAAACACTACTCCGAACCCGTTTGCGCTACCAAACCTCGGAACATTGGAC
CCATTTGAAGCCTGGGCAAACAAGAAAACGACGCATAGCCTGAACACCAC
TCCAAACCCGTTTGTGCTACCAAACCTCGGAACATTGGACCCCTTTGAAG
CCTGggcaaacaagaaaacgaCGCGTAGCCCAAACACCACTCCAAACCCG
TTTGTTGCTACCAGATTTCGGAAAACTCGACCCATTTGCTGAATGGTCGA
ACAAAGAAACCTCTATCAAAACGACTCGTCCATCTCGTTTTATTGCCCCA
AACTATCTTaaagaaattgctaaaaacgcCAATAAAGACAAAACACACTC
TCTATTGGAGCTTGACCTCTTAAAAGAACTTGATAGGTTTGAGGGTAAGA
ACGCCCGCGGTTAAACGTTCGATCCGAATGGTGGCTTGGACCCCTTTGAA
GCgtggaaaaattccaaaaaaacgaCGCCGCGCCCTAACACTACTCCAAA
CCCGTTTGTGCTACCAAACCTCGGAACATTGGACCCCTTTGAAGCCTGGG
CAAACAAGAAAACGACACACAGCCCAAACACTACTCCGAACCCGTTTGCG
CTACCAAACCTCGGAACATTGGACCCATTTGAAGCCTGGGCAAACAAGAA
AACGACGCATAGCCTGAACACCACTCCAAACCCGTTTGTGCTACCAAACC
TCGGAACATTGGACCCCTTTGAAGCCTGggcaaacaagaaaacgaCGCGT
AGCCCAAACACCACTCCAAACCCGTTTGTTGCTACCAGATTTCGGAAAAC
TCGACCCATTTGCTGAATGGTCGAACAAAGAAACCTCTATCAAAACGACT
CGTCCATCTCGTTTTATTGCCCCAAACTATCTTaaagaaattgctaaaaa
cgcCAATAAAGACAAAACACACTCTCTATTGGAGCTTGACCTCTTAAAAG
AACTTGATAGGTTTGAGGGTAAGAACGCCCGCGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021_pilon | genome | sc0000021_pilon:864482..869717 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1162-1368:5030 |
| Aaloc | 796-1161:4663 |
| Aaloc | 538-795:4366 |
| Aaloc | 412-534:3662 |
| Aaloc | 223-411:1664 |
| Aaloc | 106-219:775 |
| Aaloc | 1-105:1 |
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