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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:101667..106216+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043224 ID=XLOC_043224|Name=XLOC_043224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4550bp|location=Sequence derived from alignment at sc0000072_pilon:101667..106216+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttcattctTTGGCAAAGCTATCAACAAATACCAACCAATCCCAGA
AGATGGTAAAATCAACACTGatgcttttttgaaagcttgCAGTGAAATTG
TCCCTTTCTTTGGTAAGAGGCTTTTAATGCTTTAGAAAGACAACCccctc
tcacagacccactgttTTAGAAAGACACCCAATGGGACCCCTCCTCccgc
tggaaaaattggccaaaatatcgtcccccgtggaaaattatatttgattg
tgtttttttCGATCCCTACTGAATTTCTGgcctaaaaaaattcaaatccc
cagccataaagaaCATGGGAATACCATTCCCCATTGGGATTCgttccgtt
atttttacccccactggctgaaaaatcccaCTGGGTCTGGGAGAGGGGGC
TGTAGAAAGACTTTTCTATTCCTGTTTAAACCTAAAATTTTCAACTAAAA
ATGGGCTTAACCAGCTCTGACTGAGGTTTTTGAAAGTTCAAAGAAAAGAA
TCTTTATGGCATCAAGTTGCGAGTTGGTGATCTACAATGTTTTACAATGA
TCCCATTATGTTTCTCATATATACATATGCATCTCTGGTTAATGAACGAA
GCTACAGTTTCTTAATTGAAATCAGAGGCGGTTAAATAAAAACACTCTTT
GTATTTCTGTTATTTCAGATGTGTTAGGGTCCACGGCATTTGCACCAGTC
AAATCGGATATCAATGGAAACATTGCtgtaagtaaataaataaaatgcaG
CTTCTCCgctacatgctttttttataagaataatataCTCATAAGAATAT
TAAATATGAAATTTGCCGATAAAAATTAAGGATATGCTAAGAATAGCatc
tcatttttggacctaccccggtggggtagaggtcctataaattaacccgt
gttcgtccgttcgttcgtccgttcgttactagcttttctcgggattggct
cattagtttttcctaatttttggcacaaagatgcaaaatggtaatgccca
aaatgtgacggagcccgattttcgaaaaaaattcatttccggccgaaaat
gccggaaatatgccggaaaaaccggttttttggcattttctcgagatttc
atcattagtttttccctattttttaaCAACGCCAACgtcatcaagcatga
ttcaattatcaataaaactgatttttgcaactggaactttctatttcttt
tttccctactctccttccctctccccatcaactatcaatgataaaattta
aggcGTTTTGCAATCTCGCtataaacgctatattttctgacctgattgtt
ttcatttttctccttattgctatctaactttcatcatcaggtaggtccat
tcagcatctagcttgttatctGTAAATTGTACAAATTGTATTGTTTAGAT
CTCGAGAAATCCTCGAGTGTATTCTGAGCTATTAATTTATGAGTATCCCG
TGAATCTAGTATGATACTAATTTGCGCtgtatatttttagaaattacGTA
AGAAGTATGACACTAATCAAGAGAAATTTATAACACTGCAAGACATTGTG
AACAGTGAAATTGAATCCAACACAACCAAAGCTAAAAATTCCGCCACTGA
CGCTTTGTTATGGTTAAAAAGGTGAGAAAATTGAATCATTtaactaataa
taataatgttttacatatttccaggccaccgtgcaagcacatgggcctct
ataaatcgctcatacattggtttgatttattacaaaggttaacttcaaac
agatatgcaacaatagtgacaatttcaatcatactcaaacgttttctctt
tccaagctagaccgaggttttctttaaactcttgtattgtagatgattta
actactttttcaggtaGGCTATTCCACTGTTGAATACCCCGATAGTAAAG
GGAGTTGCTCTGGGGTCCACGGACACCATCGTTCCCGAAAATTCTTACCA
GTTCAGAATTATGTGTTctcattggtcttattcgttggttaaatttctta
ggaacacaCGATTTTTCATAGTGATTTAAATGTTTAATGTGGCAATTGAT
AATCTGGGAATAATGATTTTCAGTCTGAACCatttaccttattacacgaa
tattactagtcattttattaacacgaattgaaaaatttcgtgtttaataa
aaacccccttaattaaaaccagccatggtgtccttgaaaaagcaataaaa
ttcgtgttaatttttggagtgttaatttcaaggccgttgattACTTACCT
ATtttaatattcgtgtaataaggtatcaACTTGTTTACGGTCATCCCAGC
ACTGCCAACTATATCAGGATTTATAACTTTGTCGTCTCATACttaatttt
ataaataattttacGTAATTATTATGCTATTTCTAAAAAAGTTTCTGTCt
gtatccggggggggggtacttaggcaaaaataggtgctgggtatgtgcgg
acggtaagggtcgggtttttcacctttcaaagtctctctaagggttacaa
aaatcaggaaatttcaaagtagtctctctaagggtgggaaaaatttcgat
ttttagaaaaaaattttggttttgagataaaaaattacaaaaaagtctca
ctaagggtaggaatcttttgaaaatcagagaacatttttcgaaaaagtct
ctctaagggtcactttttcactaaaatttggtctctctaagggtcggttt
tcggaggtcccgtccgcacatacccctcattcaccaaccctagtaccccc
cccccccggggtctgTATCTACAAATTAGGCATGTTTAATTCGAAACGAG
TTCAAAGCTATGTAGCGAAGTGAGGTCAACTCTCTACCGCAGGTAGCTGT
TTAAGGCCTATCCTGTCCTGTTCGAGTTAAAGGAACCGCAATCTTTACAT
AATATCACCCAGCTGGAGTCGTTcatgttttcttcttctttttttttcca
taGGGCATTGTCTTTTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCG
AAGAGGATTTAGTGAAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAAA
CAATTTCACGGATGGATGGTGCAAGGAATTTTCTCAGTAAGTCTAATACA
TCATCGgtcttatttttatattttttctggtTCGGTGCAATTATAAGCAC
TAGCAAAATATCGACTAAATAAAATCTGATTGGCtaccaacctcgttccc
aggcgtattatcagcttttttatgcttactgataacGCTAGATAATTTTT
TCTCTGGCgccaatcagtaacgtaaataaagcctggaatacacggggaca
aGGTTGATTGGCTGTATTTAAATATCGACTCGTCCTCAGAAAATTTCGTT
AAAATCAAGAGTTAATTTACTAGatttttttcgtgcaaattacaTGGATT
CGAAGACCCATGTAATTCGGGCTCTACCTTTTTGCCCAGTTAACTTTGAG
ATCTTACGATTAGCCTTTgccaattttttcttgaaagttttAGCTCTATA
AATTGTGAATTCAACAGAAAGCTGTTAATTATAAAATATGCTTACAGTTT
CAGCCAACAACTTGCTGTCTAAATCTCAATTATATTCTTGCATACCTACT
TTTCTAGAAAGAGCAGTTTACTTTAATGGTAAAGATTATGATAATGCCTA
TACACGCCCtttttataaaacaattttataacaaCACGAGcctgaaaatt
gaccaaaacctaagaacaaattaagaacaatctgagcctcagatttcaga
aattactaagacaatacatgttttttggacctatccCGGTGGAGGTCCCA
TAAATTAATCTCTGTCcattcgttcgtccgtccgtccgtccgttcgttac
caacttttctcgagaatggcttattagttttttctgatttcttgcacaaa
gatgtgtaactataaacccttcgAATGTGACGgggccgattttcgaaaaa
aaatatcttttgggcaaatttgggccaaaaaacggctaaaaaacgggttt
tttggactttgaatcactattaataagcatacataaATGTTctcagccaa
attactcaattttttgatgagatagatgtttttttgctcacgaagtcttg
aatatgaaagaacatttcaagagcatgacatttttgtttctaaacgtttt
tttataagaaacaaacgactaattttgatagatcgtcactatttgtgttc
tggaACGTTATGCTTAGAAACGTTATGctcgaaagaaaaaacattttctt
attttaagtaaagaaactaagcgtttaaagaacatcgtaagaacaaaata
taagCTTATTTGTAAcatattgaataatttttaCTTTAAGACTTAAATCT
TTatctttctaaaatatttttagttggCAATGAAAGCGGTACCATATCGT
AAAGATTTCATGAAATCTCTTGGTCCTGATACCACCGAGGATGTAGTCTT
ggctgaaatgaaagaaactgtCACCACAATGGCTGCAAACATCGATCAAT
TGAACCAATTTTATTTGGATACTAAACAAGATAGCTCACAAAAagtttag
Coding sequence (CDS) from alignment at sc0000072_pilon:101667..106216+ >XLOC_043224 ID=XLOC_043224|Name=XLOC_043224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000072_pilon:101667..106216+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttcattctTTGGCAAAGCTATCAACAAATACCAACCAATCCCAGA
AGATGGTAAAATCAACACTGatgcttttttgaaagcttgCAGTGAAATTG
TCCCTTTCTTTGatgtcttcattctTTGGCAAAGCTATCAACAAATACCA
ACCAATCCCAGAAGATGGTAAAATCAACACTGatgcttttttgaaagctt
gCAGTGAAATTGTCCCTTTCTTTGATGTGTTAGGGTCCACGGCATTTGCA
CCAGTCAAATCGGATATCAATGGAAACATTGCtATGTGTTAGGGTCCACG
GCATTTGCACCAGTCAAATCGGATATCAATGGAAACATTGCtaaattacG
TAAGAAGTATGACACTAATCAAGAGAAATTTATAACACTGCAAGACATTG
TGAACAGTGAAATTGAATCCAACACAACCAAAGCTAAAAATTCCGCCACT
GACGCTTTGTTATGGTTAAAAAGaaattacGTAAGAAGTATGACACTAAT
CAAGAGAAATTTATAACACTGCAAGACATTGTGAACAGTGAAATTGAATC
CAACACAACCAAAGCTAAAAATTCCGCCACTGACGCTTTGTTATGGTTAA
AAAGGGCATTGTCTTTTATCCGTGTTTTCTTGGAAGAAGTAATGACAGGC
GAAGAGGATTTAGTGAAGTGCGCCAAAAAAGCTTACGAAAATTCACTCAA
ACAATTTCACGGATGGATGGTGCAAGGAATTTTCTCAGGCATTGTCTTTT
ATCCGTGTTTTCTTGGAAGAAGTAATGACAGGCGAAGAGGATTTAGTGAA
GTGCGCCAAAAAAGCTTACGAAAATTCACTCAAACAATTTCACGGATGGA
TGGTGCAAGGAATTTTCTCAttggCAATGAAAGCGGTACCATATCGTAAA
GATTTCATGAAATCTCTTGGTCCTGATACCACCGAGGATGTAGTCTTggc
tgaaatgaaagaaactgtCACCACAATGGCTGCAAACATCGATCAATTGA
ACCAATTTTATTTGGATACTAAACAAGATAGCTCACAAAAagtttagttg
gCAATGAAAGCGGTACCATATCGTAAAGATTTCATGAAATCTCTTGGTCC
TGATACCACCGAGGATGTAGTCTTggctgaaatgaaagaaactgtCACCA
CAATGGCTGCAAACATCGATCAATTGAACCAATTTTATTTGGATACTAAA
CAAGATAGCTCACAAAAagtttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:101667..106216 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 436-612:4374 |
| Aaloc | 304-435:2955 |
| Aaloc | 172-300:1491 |
| Aaloc | 115-171:671 |
| Aaloc | 1-111:1 |
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