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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:203131..206300+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043219 ID=XLOC_043219|Name=XLOC_043219|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3170bp|location=Sequence derived from alignment at sc0000072_pilon:203131..206300+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCAT
TTTGTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATC
TTGGAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTT
GGCCTTATTGTAAGTatattaaaagctttttttataagaccaaCTTCATA
AGAACATTAAGCTCAATTTCAGTCGAAATCTTAAGAATGATAccataaaa
attatattccagCATAAATATTAAAAGCATCTCAAGTTTATTTTGGCTGT
CTAGGACATTTTTTCATCGACTATTAAACCAGGCCTGTTTGGGTCACAGT
AAGATAGTTTGCTatattttaaagctcatttcTGCTActagtttgtttac
ttttgttGGAGAATAAATCTTTAAACTTTAGGCTCCAAGCTAAAATTACA
TGTGTATGTGTATGGCAAGAGTGTTAGAAACATTCACTTGGGAAAAACTA
AAACCTAATATTATTCTCTATTTCCCGGGCTCGTAAGGATCATCGGCTTG
AAATGGTTAGGATaaaaaaaGCCCGGGGCAGAAGGAGAAACTATCTACGA
ATCAaagttcttttcaaaaattaagaaaaagtcTGATGAGAATTCGCTTC
AATAGCGTTAACTTGCTTTACTCGTGGGAGTTTGATCGGGCTGGCAGCTT
AATACAGGCCGGCCTACAGTAAATATGAAAGAATCATTTCTATTGGCTGG
CATTTGAAATCAACATCTAATTTGAAATCCAATTCTTTATCATCATTAGC
TCCAATCATGGTCGaaagatattgagattttagtttattttaacgCTTTt
ccagaatttaaagttcgggagagaattgctattttagtacttttacttta
tttcattgaatatttcgattttagaggggtccGGTTAGCTTCTAGGCTAA
ATTCCAatccttattggagcaaatttaaaaatcattcgttgtgttttaaa
atttcgcagcgagatcccctttgtctcaaatgtttCGTCCATGATTATCT
CATTTTTGATAATACGAGCTTCTGCGGACTCATTTTTCCTCTCCGTAAAT
TTCTAGCCTTGATGTTATTCTTTGAGCCAATCAAATTGCTTTTTACTTTC
TTTCTGTTAACCCTGGTCCACAACAGATGTAGAGTATTAAAATATTGCTC
CTTCTCTTTCAGATGTTCATCAATATTTTCACATTGTTATTGGCTATGGG
AACTAGAAGATTCATGATTGTAAGTGTTTtattgagcatttttatttggt
ctttgggttttgAAATAAGggacatgtttaaaggtcccaaACTTATacct
aaaaatgttttgactCGAGAATACATCAATTCATTAGATTGTGGCATTGT
TGCGGCAAATCCCGAATCGAAATTATCTTCTTCTGAGCATCGTCTACTTG
AATATTGAACATCCTgcaaaaagaccaaaaaaggTCAAACTTAGTTCTGG
AGAAAGGGAAAACAGGCCAGGTTATTGGGCTTATCCATTAAAAATCTATa
gaaaccttttcaagtcaaaataaAACTGTTGGAAATGTgaggataccccc
tggaaagtgacaaaatttgcaaagaagaaacccttggaaaaaattagtTT
AATACTTCAAAGTGACGGGGAACGAACAAAAACTTGTCttttaccccttg
gaaattttagaataacttttcaccccctggaaaatgaaaaaaacactctg
AAAATGTTCgtcacccccctgtatggagatGAAATAGAATGGCCCGTTGA
TTTTGCGGAGTACTGAGCATTCAAATATGCCTActctatttttttatatt
cattgACAATGCATCATCATGGACACCAAGAACAGTAGATAGGACGTTAA
TGAAAGCTAGGactcttattttattttacgTTCAAGTTATTTAAGAGATT
ATGATTCCTTGTGCCAAAACACCACCCCGCCCTCGGAAACGGGTGTAAAC
GATGGGAAAAATGGTGTAATCTTGACACTACTCACactctaatttttttt
gttttcctttcagCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTG
GTGTATGTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTT
GAAAGATTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGA
AAAACCAACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCAC
AACAATTCAAGGACGGATTCAAATGTAAGAATATAGATATGTATATAAAG
tctgtttcaaaaaatattgataggCCATACATTTTGATATATTGCTctta
aagataattttgagcaaataaaactttaaatgtCCGCTTTACCcgttttc
agccattttcagctATCGCTACTACGTTTTTCCTAGATTTCGATAGCACT
CAAGAGAAATTTTTAcaatctctctctctctctctccctCCAAAGCCATA
AGGTTTTCTTTCCTAGGAGACCTACCAGTTTAAAAGAAAGCTAGCACCAT
CAAAACCTTTTTTGGAATGTCATAGTTGCTGAGGTCTTCCAGTCAACGCC
CAAAGGTCTGATTTAAAACTGATTTAAAACAAGACCCAGTTTCTGTAATG
AGAAATACATTCAAGGGACTTCAGAAGATTTCTCACAAATATCTTTAGGG
CTTGGATTGGCCAATTTTCTACTGCACATTTGCTTCaaaaaaaTGCTTTA
ACGCTGTCAAccttttttcagaaatcaaaaatgttatcttgtaaaatttt
ttacttcaagGCACTGGATTGTTAAATAccttaaaaaacaaacaggtTTA
CTCTGACCAATATTACAGCCATTTAGCGAGCGTGTTAAAGTAGATTAGAT
TCAAGTTTACGATAACTGTTAGCAAACatcaaatattttagatttatggT
ATTGGCCCTTACACATTTTTTGGCCCTGGTATCCAACAGTTCTATTTTTG
GCTTGATATGAGTAttactttttctgtttttagtTCAAGCATGTCCACTC
ATCCATACTGGTGAAGATATGTGGCTAGCAATGATAGTATTGGCTGCAAT
AAACGCATTCTTTTCATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCAT
GTCAGaaaaaaaGAGaggta Coding sequence (CDS) from alignment at sc0000072_pilon:203131..206300+ >XLOC_043219 ID=XLOC_043219|Name=XLOC_043219|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000072_pilon:203131..206300+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCAT
TTTGTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATC
TTGGAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTT
GGCCTTATTATGGCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGC
ACTGACCATTTTGTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCT
TTATGAATCTTGGAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGA
ATATGGCTTGGCCTTATTATGTTCATCAATATTTTCACATTGTTATTGGC
TATGGGAACTAGAAGATTCATGATTATGTTCATCAATATTTTCACATTGT
TATTGGCTATGGGAACTAGAAGATTCATGATTCTTTCCTCCTCCTTTATC
ATCAGTATCTTTTGTCTTGGTGTATGTATAGTTGCCATTGTTTTCTCTAT
TGATTATCGTAATGAGTTTGAAAGATTCGGTAATTTGAATCGCCAACAAC
TTACTGGAAGCTACTGCGAAAAACCAACTACAGATGATCAATGTATCTGC
TATGAAAATCAAGTACCACAACAATTCAAGGACGGATTCAAATCTTTCCT
CCTCCTTTATCATCAGTATCTTTTGTCTTGGTGTATGTATAGTTGCCATT
GTTTTCTCTATTGATTATCGTAATGAGTTTGAAAGATTCGGTAATTTGAA
TCGCCAACAACTTACTGGAAGCTACTGCGAAAAACCAACTACAGATGATC
AATGTATCTGCTATGAAAATCAAGTACCACAACAATTCAAGGACGGATTC
AAATtTCAAGCATGTCCACTCATCCATACTGGTGAAGATATGTGGCTAGC
AATGATAGTATTGGCTGCAATAAACGCATTCTTTTCATTGGGAGGTCTAT
TGTTGTTCATTGTTGGCGCATGTCAGaaaaaaaGAGaggtatTCAAGCAT
GTCCACTCATCCATACTGGTGAAGATATGTGGCTAGCAATGATAGTATTG
GCTGCAATAAACGCATTCTTTTCATTGGGAGGTCTATTGTTGTTCATTGT
TGGCGCATGTCAGaaaaaaaGAGaggta
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:203131..206300 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 430-564:3036 |
| Aaloc | 217-426:2064 |
| Aaloc | 160-216:1213 |
| Aaloc | 1-159:1 |
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