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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:228623..233631- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043210 ID=XLOC_043210|Name=XLOC_043210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5009bp|location=Sequence derived from alignment at sc0000072_pilon:228623..233631- (Clytia hemisphaerica_ch_hm2_pilon)
TATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCGCCATGTCAAT
ATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAAT
CTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCGA
TTGGAAGGACGATCTTATATGATCACCGGTGCTAATAGTGGAATCGGTAT
GAATGTTATTCATGATATTCATGACGTATTATTTTCTACCGATGCTGCCT
TAATAGGGTGTATTCCACTAGACAGTTATTTAAACCATAAAACTAATGGC
AAACTCCTGGTCTTTTTTTGGGTACTTTCGTACAGAATCATACGTCATCA
ATATCACGCATTGTATCTTTGATGCCAGGTCAGCTCAAAAATTGGACACA
ATTTTGTCACCCAGGCTACTAGCTATTAAACTCTTCCCTTTCGAACTCAC
AGACATGGCATTTTCAGGATTATTATCTATTGGCAGGATTAAAATTTGAC
GGTATCTCGATAATGCTCGATAATCAGGTTCCTTAAACCAGTTTCAAAGC
TTCAACTAAGGATTCATCAGGATTCATAAGAGGTTTCTATTCAATTCGTG
ATATGCACCATTGTAATATCTTCCGACATTACATCACGGACCCGACAGCT
GATTGGTTGCAAGTGACGTAAAATCAGTCAATACGTCAATTTCAACCAAT
CAGCTGTTGGGTCCGTGGAAGATATTTCAGCGGTGCATACCACAAATACA
CAATGATTAAAAGTTTTTATTTGGTTTATTTAGGTAAAGAGGCAGCAATG
AAGATCGCCAGTATGGGAGGAATAGTTCATTTGGTTTGTCGAAATGAACA
ACGTGGTCAAGAAGCACTGAAAGAAATCAAAACACAGTCTGGTAAATTAT
ATCATGCATGTTTCCTTCTGTCCAATCAATGAAATTTTTTTTAGCCCGGC
CACACGATGACGTCATCTGGCAGGTGCCAGGTAACAACATTAGGTGTTAA
TGTTTAAAATTCAGTTTTACCTACGAAGGACTATCTGTGTCAATTTTTGA
ACTTTAATAGCTATCTGAAGTATAGTTGCATTATATATGCTAGCAAACAA
ACCTTATTTGGGAAAAACTCGGGGTTTTAATTTGCAAAGGAAAAACATTC
GTCACCTAGAGACAATTTCGTTTCTACTTCTCGGCCGAATTTCTAAAAAT
GCATCACTTTTTCCCCCGACGAAATTCACAATTTAGTCACTTTAACCTGG
CTAAATTGTTCTTAACATTGTTTCCGTTGTTTCCTTAACCTTTAGACACC
GCTGTTTTTAAAAACAGCGCGCGCTGCTGCCGCTGTTTTTTTCATGAAAA
TGGAGGTTTCGCGGAAAATGTCATAAAATCTGAACCGCTAAAGCTTAAGT
AAAAAGTAAACCCATTTTGAAAAGCTAAGGATCTATTTTTTCGGATAATG
CTAAAAAGACGCCTCATCACCCTTTTAAACCTGACTACACAGCCTCAAAT
CAAAACAGTAAAAATTCCATGTTTACGTTTTTTTCACTTTTTTTCTTTTT
TTTGACAAATTGAATGAAGAAAGTGGGTACAAGGTAAAGATTGGTCCCAG
AAAAATTATTTTGTTTTAGTTTATGTTATAAGCCACCATTGTGTGAAATT
TCAGGGCTGAAGAAGCTCATTTCATCTCAGAATCTAAGTTTCGGTGAAGC
ACACTTTTCCACCAAAATCGACACTCTGGCCACAACAGGTAAATTAAGTG
GTCCCGTTGCTCTAAAATTGGCCCTGCACTTACCCTAAGCCTGTAAAATT
ACTACAATAATCATAACAGACTCTCTATCATGTAAATTCAAGCAATAAAA
CACCAGAATAGTGGAAAAACTGAGGCAAAACAGCCCTGAGCTGTTGGAGC
TAGAGATAGGCATGTATGTCAGGAAATACCCCCTAAAACCCCTTCAAACC
ACATAGAAACAGCCAATAAAGGTTCTCTATCTCATATAATGATATTTATA
TGCTGAAACCAAGAAAAAACCAGACATAAACATGACTTTTCAGTCCAAAA
ATCCATCAAACACCCTCTGTCCACCACTAAAACGATGCTTTGTTGACATT
TGAAAAATACACCGACATTGAGTTCCGATATCTCAAGATGTATAAAAGCA
GGACCCGTAAAATTTTGAATGAATGAACCTTCACCCCTATCCTGTCTAGT
AAATTTTACAGAATAGAAAAATTCAAACTGGTCTTTATTTTATTAAACTT
TGAAAGGACCCCAGTATCAAAACGTACGTGGTACGTCTCTCGGCCTGTAT
ATATGACGTACGTGGTACGTCTCTCGGCTTCTAAAGGTTAACAAGCCCGA
AAATAAATCTCGTAATTTGACGTTTAGAGCAATAACTTCGGTTAATTCAG
ACGTGAAGAATTTAAAAGGGTAATCACAAAAAACTCTCGCTACAAAATAG
TATACCTTCTGTTCACGCTTTTATCTTAGTTTCTCATTACTAGTTATTTA
TTACTTTATTTTTACCATATTCATTTATCCAGGTAGTGAAGAAGTGCATC
TTCATCTACTTGATATGTCTCAATCAAGAGAAGTCCATAAATTCACCAAA
GATTTCACTGAATCTGGTCGTCCTTTGAATGTACTCATAAACAACGCAGG
TTAGTATCTACACGTTTTTTATAAGAACAAACTATATAAGAACATAACGT
TTCGATGGCCCAAAAGTTAAGAACAAGTTAAAAACATTTTAAGGCTTCGT
GGACTCTAAAACACCTGATTTGTTAAGAAAGTGGACAAAAAATACTCAAA
AATGACGGGATATTGAATATGGTCTACACATTATAAGTTAAGTACAATTT
AAGGCTTCGTGGACTCTAAAACACCTGATTTGTTAAGAAAGTGGACAAAA
AATACTCAAAAATGACGGGATATTGAATATGGTCTACACATTATAAGTTA
AGTACAATTTAAGGCTTTGTGGACTTTAGAACACCGAATTTCATAGGCAA
ACTGACAAAAATATTCAAAAAATGGCGAAAATAAGAACATGCTAAAAAGC
TTAAGGCTTAAAACTCAAAAAGTTAAGAACATCCAAGGCTTCAAAATTTT
TAGATCTTCTTATAAAAGAAATTTCTATATTTATTTTACCAGGTTGTATG
GTTAATACAAGAGAATTGAACGAAGAAGGAGTCGAGAAGAATTTTGCTAC
CAATACACTTGGCACCTACCTCCTAACTACAGGCTTGATTAACCATCTAC
AGAACTCAGAATCTCCTCAAGTTATCACAGTCTCGTCAGGTTGGTAAAGT
TTATCTGACTTGTAAGATTTCTTGAAATAGTGAGAGCCACTATGTTCTAA
GAACATCCTCCGTGTGAACAGACTTGTTAAAAGCAAACTAAATTTGTTAA
ATGATCAATTAGGTCCATAAAATCACAAAAACGAGTGGTAAGAAAAATCT
TGACCATTTTGCTGGTCCCCATGTGACGTCATCATTTTTGCTGTGGCTTG
AAAATGAAAGTGAAAATTAGAAGCTCATATATGGTTCAAATGAAAGATCA
GTTTCCTTTTGACAAGTCTGTGCATGCGAAGAATATTGTAGCTCTCACTA
AAATATTTCCCGGGGGAGGGGGTACTTGTCCTGAGGGTACTAGTGTTATG
GAATGACGGGTATGTGCGGACGGGACTTCCGAAAAACGACTCTTAGTTTT
TGTAAAAGAAATTGATAGAAATAATTGTCGAAATATTTCCTAACCTAAGA
AGAGACTTTTCATGGCTTTTGTAGAATTCCTTGAGCTAAAGCTAAAAGAA
CAAGTTAAGAACATTTTTAGGCTTTACACTCAATAGCATACCGCAGTGAA
TTTTAAAAAAGGCATTGATTTTTCTGTTTTACCGAAATTCAATCCCATCA
CCCTTTGCGTTGATTACGCTTGCACGCAAATTACACTCAATTACAAAGGA
AAAGTTATAACTTTTACGACGAATTAATATGAAAAGGATTGTGCGATTAA
ATTTCGGTCAAATGAGAAAAGTAATGATCATGACGTTTGCTTAACGAAGC
GCTATTTCAAAGGAAATTGCACAAACATTCTCACAAAATTATATAAATAA
GAACGTTTTAAGAACATTTTTAGGCTTAAAACTCAAAAGATTTTGGATGT
TCTTATAAAAACCTGTATTATAACGTAGAAAACGATTGAAGTTTCTCGTT
TTAAAGATTCTTCATGTCTACCTTCATGCAGGTGGTATGTTAGTAAACAA
ACTGGATTCTAGTGATTTCAACTTCGAACAAATGAACCCTTTCGATGGCA
CAATGGCTTATTCTCAAAACAAACGGCAACAAATTGAAATGACTGATCAT
TGGTCTGTACAATATCCAAACATACAATTCACAACCATGCATCCTGGTAC
GAGATACCTATTTTTAATATTAATTTTGTTTGTAGGATTGTACCTTAAAG
GAAGAGAGACCCCTGTCTCACAGCCCCGGTGGAACTTTTTCCTCAGTAAA
TTTCTATTGAAATTCCAATGGGGATAAAAATTCAATTGCTCTAAGGTTAA
AAAATGAAATGGGGATGGTTTTGGAGTGCAATTTTTAAACGTTGAATTTC
GAATGGGAATGAAGTCAAAGTAAATTTCCCAGTGGGCTGAAATTCCAGGT
TATTTTTCCACTTGCCAAATTTTGTAGTGGGGCTGGGTAGTTTTATGTAA
AAGAAGACAAAAGAAGGCAAATTGCAATTCAATATTTTAGGTTGGGCCGA
CACTCCTGCTGTTCGCAATTCCATGCCAGACTTTTACGAAAAAATGAAAA
ATAGACTTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCC
ACTTCATCAACCGCCCGTAAAGCGCCCTCTGGTGGATTTTATCAAGACAG
AGCACCAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAA
AAGAGAGGAAGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTT
AGGTCATAG Coding sequence (CDS) from alignment at sc0000072_pilon:228623..233631- >XLOC_043210 ID=XLOC_043210|Name=XLOC_043210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2004bp|location=Sequence derived from alignment at sc0000072_pilon:228623..233631- (Clytia hemisphaerica_ch_hm2_pilon)
TATCAAACTATAAAAAAGCTCAACCATAAATTACCACCCGCCATGTCAAT
ATACCGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAAT
CTGGATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCGA
TTGGAAGGACGATCTTATATGATCACCGGTGCTAATAGTGGAATCGTATC
AAACTATAAAAAAGCTCAACCATAAATTACCACCCGCCATGTCAATATAC
CGCAATGTGATCTGGTTCACCAAAGGCATTCGTGAATATTGTAAATCTGG
ATATGAACATGCTGCCAAGACTTTCGAATCTTTAGAAGGCGTTCGATTGG
AAGGACGATCTTATATGATCACCGGTGCTAATAGTGGAATCGGTAAAGAG
GCAGCAATGAAGATCGCCAGTATGGGAGGAATAGTTCATTTGGTTTGTCG
AAATGAACAACGTGGTCAAGAAGCACTGAAAGAAATCAAAACACAGTCTG
GTAAAGAGGCAGCAATGAAGATCGCCAGTATGGGAGGAATAGTTCATTTG
GTTTGTCGAAATGAACAACGTGGTCAAGAAGCACTGAAAGAAATCAAAAC
ACAGTCTGGTAGTGAAGAAGTGCATCTTCATCTACTTGATATGTCTCAAT
CAAGAGAAGTCCATAAATTCACCAAAGATTTCACTGAATCTGGTCGTCCT
TTGAATGTACTCATAAACAACGCAGGTAGTGAAGAAGTGCATCTTCATCT
ACTTGATATGTCTCAATCAAGAGAAGTCCATAAATTCACCAAAGATTTCA
CTGAATCTGGTCGTCCTTTGAATGTACTCATAAACAACGCAGGTTGTATG
GTTAATACAAGAGAATTGAACGAAGAAGGAGTCGAGAAGAATTTTGCTAC
CAATACACTTGGCACCTACCTCCTAACTACAGGCTTGATTAACCATCTAC
AGAACTCAGAATCTCCTCAAGTTATCACAGTCTCGTCAGGTTGTATGGTT
AATACAAGAGAATTGAACGAAGAAGGAGTCGAGAAGAATTTTGCTACCAA
TACACTTGGCACCTACCTCCTAACTACAGGCTTGATTAACCATCTACAGA
ACTCAGAATCTCCTCAAGTTATCACAGTCTCGTCAGGTGGTATGTTAGTA
AACAAACTGGATTCTAGTGATTTCAACTTCGAACAAATGAACCCTTTCGA
TGGCACAATGGCTTATTCTCAAAACAAACGGCAACAAATTGAAATGACTG
ATCATTGGTCTGTACAATATCCAAACATACAATTCACAACCATGCATCCT
GGTGGTATGTTAGTAAACAAACTGGATTCTAGTGATTTCAACTTCGAACA
AATGAACCCTTTCGATGGCACAATGGCTTATTCTCAAAACAAACGGCAAC
AAATTGAAATGACTGATCATTGGTCTGTACAATATCCAAACATACAATTC
ACAACCATGCATCCTGGTTGGGCCGACACTCCTGCTGTTCGCAATTCCAT
GCCAGACTTTTACGAAAAAATGAAAAATAGACTTCGGACAACGGAACAAG
GTGCGGACACAATTGTTTGGCTTGCCACTTCATCAACCGCCCGTAAAGCG
CCCTCTGGTGGATTTTATCAAGACAGAGCACCAGTTTCTAAACATTTACC
GTTAGCTTGGACTAAATCATCAGAAAAAGAGAGGAAGGTTTTTACGGAAA
AATTAGAGACATTGGCTTCAAAATTTAGGTCATAGGTTGGGCCGACACTC
CTGCTGTTCGCAATTCCATGCCAGACTTTTACGAAAAAATGAAAAATAGA
CTTCGGACAACGGAACAAGGTGCGGACACAATTGTTTGGCTTGCCACTTC
ATCAACCGCCCGTAAAGCGCCCTCTGGTGGATTTTATCAAGACAGAGCAC
CAGTTTCTAAACATTTACCGTTAGCTTGGACTAAATCATCAGAAAAAGAG
AGGAAGGTTTTTACGGAAAAATTAGAGACATTGGCTTCAAAATTTAGGTC
ATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:228623..233631 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-1002:268 |
| Aaloc | 571-732:777 |
| Aaloc | 424-567:1866 |
| Aaloc | 307-420:2476 |
| Aaloc | 199-303:4225 |
| Aaloc | 1-195:5010 |
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