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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000302_pilon:367492..371603- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043197.2 ID=XLOC_043197.2|Name=XLOC_043197.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4112bp|location=Sequence derived from alignment at sc0000302_pilon:367492..371603- (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGATACCTTT
AGAAAAAGAAAGAAATTTAGTTTCACTAATCTATTGTCCATCGGTAATAC
TGTTAGAGCAGTAGCGTTTTGAGATGCAGTTTGTATAGAAAATTTGTTGA
AAATAAACTCAAAATAGCCATCAGGTTAAGGAAGAAGTATTTAGACCTTA
TTTTAAGATAAAATTTGTTGAATCATTATGACGAAACATCACAAGAATTT
AATGTACCTCCTTTGCAAACTGAAAGCAAGCTCATCATTCTTAAGCAGTT
CAGATAGGGGCTCTAAAATAGAAGAAAATATTAATTAGGGACAACAAGAA
ATTGGCAGCCTTCAAAGGCGTAACGTATGCATAGCGTCAGTCCAGGTTCA
GCCCACCAGGCTAAAAAAGAGCCCCCCTTAAAATTTAGGTCCATCAAATC
GTTGAGCAATCAAGGGCAGCCCCCATCCCACAGCCTAAATAATTTATCAT
ATTGTAATATTCAAGAGAAGAACGATTTCTGCCCTTTTGTCATTCTCAAG
ATCATAATTGTTTTTGGAGTGGATTAAGCCTATTACTTACTTGAGTAAAA
AATCCTGGCTTAGTAAATCAGTTAGGAAAAAAATTCTGTACTCATTACAA
GAAATTTGAGTGAAAAAGAGGGATGAAGGGGTTGGGCGCAGTTGAAACAC
AATAGAAGGATCACCCTCTCCCTTCAAAGGAATGAGTAGTGTTTACATGC
TGTTTTTTTATGATTATATTGAAATATCAAGACTTTTTAATTACATGCAT
GTAGAGTCATTATACAGCGTGCCTTGCAGAATCAAGACATTTTTCAATTC
TTAATAAACAAAATAAAACTTCAAGTTTTAGGACAACAAAATAACAAAAA
AAGTGAGATTCAATAAAAATAACTTACTTGTCTCTGTATACATGTTTCAA
CAAAATTCAACGAATCTTTATATTGCGTGTCCTCAAACATTGCTTAAAAG
AAGAATGTGAAAAAACCATAACCTATCGATGACAAAAACATCAGAATTTC
GTCATGATATAGTGCAGTTGACTCTCTCTCTAATTCGATCTTTAAGGGAT
CGAGAATTTTCCTCTGATCATAGAGAGACTTTAACACTACATTCAGCAAG
GACATCAAATTTTGAGTTCGAATTACAGAAAGATTCGAATTATAGAGTTT
CGAAATAGAGTTGTTTAAGTATTGTTTGTCAAGAATTTCTGTAATGTGAT
TTATGTAACAGAATAGAACGTTTGCTTCCATAATGGCGGAACTTATGTAA
CTTACCAAACATGAAAAACCTCTATACCACAAGGAGTTTGTGTTCGGGAT
TACAAAGTTGAAATAACTTTTAAAAGAGTGTTTTCATATATTTGATGTCA
TTTAACCACGACGTTCTAAATCTAGAACACCAAGGCCATTAGCGTTTAAT
ACATCAGTGTTATATCTAGGTAAACAAATACCTTGCTCGATAGCCAATAC
ATCTTCAAAGCTTCCCTCCGTTTTCTTATTCATGATGGCCTCACATGCAC
CAATGTCTGACAAAAAGAATGGAATTCTAATTTAGATAATGTTTTAATTT
ATTCTAAAAATGATACTTTTATACTTCGCAATCTACCTTATCTACCTTAA
CCCGCGAAATACGATTTTTTCCAATTTTATCGAAAAATTAGAAAAATCCC
TAGGAAAATGAAAATAATTTTTCCAAAAAAGGACAAAACCGCAAAAATTA
AAACCCACGAAATGCAATTTTCCGTTTTTTATTTTTGACCGCGAATATTA
GTTCCCGCAAAAATGATTCCAATAAGGTAGAAAAGCTTCAGTTGCAAACA
GCCGTGCTTATACCACAAGTTCCCCAGTACAAACAAAGTTTTCATTAAAC
TTGGATTTCTTACGTAGTGCTAATGATTTGTGTTGTGATTTCAACTCTTT
CAAATCTTCCGAAACAAATTGCTTGAAATCCGACACCGAAGATAAATTAT
CTTTTTTCTGAAAAAGGAAAAAAAAACATTTTTGATCTTTTCCAGTCAAA
CAATAACCAAAGAAGATGACGTTAAAAGTGGGTTGAACTTTGCGCTTCTA
AAATAATATATTTGTTTTTATCCATGAGGAGCTTCACGTGATAAAAATTG
GTTTCATCCTGAATGTCCTAATCATTGATTTAAAGCACCAAAGGGGCTAG
AGAAGAATTTCAACACTCCTCAAGCAAGAAAAAGCGAAGTCTTAAGATTT
ACGCCTCATTTAGAATAGGGAATTGAATCTAGCACTTTCGTTTTCACGTT
TTCACACGGCATATTTTTCGAAATCTGACGATATAATTTACTTTCAATCT
GGCGTTTGTGGGAAAAACACGCAGGTTACGCGTTTAGGATGGGTAATAAG
TGGCTTCATTTATCACCCACATGTTTCGTGTCTAGCCTTTCTTCTGGCTT
GGAAGTCAATGGTTCTAATCCTATAAAACCATTGGGAATAAAGCTAACGC
AAAAGCAAAGCGAAGCAAAAATGAAATATAATTGCATGGAAATCATACAT
CATATCCACTCTGTAATTGTCTTGCTTTTGAACTCAACAGGGGAAACACT
CCTGTGATATGCATCCCTCGAATCTCAGCGAAAACCTAAGAATATTCAAT
AAAGTATATGAAATAAAATATTATGCGAAAAATAAGAGCAAATGAGATTT
CTTTCTTTTCTAGCAAATTTCATCTCATTTTGAGCCTTCAGCCTCCCCAT
TTTTACACTAATTGTTCCACCGTTTTGGGGGAGGGGGGAATTGATTTATT
GTTTCCTACAGAGTAAAATTCTACCCTAAGGGATAAGGGATAACAAGAAA
ACAACTAAAGGGTAAAAGACGCACAGTGTTTCAAATAATGAATTAGGTAC
AAAACAATCGAAAATTCTCGGAAGCTTCATTATACAAATTTAAGGGCTCT
GATCATAGTGAAAAATCAATTTCAGAATTTGAAGATAAAACCTTATGTTT
TCGCTTCTTTGATATGTTTAAGAACAAACTGCTTTTGAAAAAATGAATTT
AAGTAATTACATCATGAGTAATTAAAAAAGGAATAAGTGTGGCATGGACC
TTAAAATAAAACGTCATAACGACGCTATTCATATACTTTTCACAAAAAAA
GCCTAATCTTCTTGGGGAAATCATTTTATTGTTTCAAACTTTTTTTAAGT
TAATGACAAATAATTTCTTTATTTAGATTTTTTCGGAAAAATTTTCTATT
TGGATACATCCCAAGTTATAGCTGTTTTCGTATGGAAATTTAGTAAAGAA
AATTCCAAAATGTTTGATTTTTACCGAGATTAGGGCTTTGAAAGGTGAAA
TACTCTTTTCGAAAAACTCTTCGTTTTCTTCTTCATTTAATTTTTTCATT
TCAATTTTTCGATTTTTAAATTCTAAAAAGGTAGGTTTTTTAACAGGACA
TATAAAAAAAGTTATACATTAATCTTTTTAAAATGCAGAAATTGCCATTT
AAAGTTGGTGTAAAAATGTCCAGAGCCCATAAAACAGACTTGATATATGC
AAGATAAGATTTAACTGCCAATTTCAAGCGGGACCGAATTTCCGGCTAGT
TAAAAAATGAGCTTCGGAAAATTAGCAAGTTTTCCTAAACACGAACTGTT
TTCCAAACAAAAGCCTCTAGAAAAACTCTTTGCCATTGTCAGCCGGCTAT
CCCGGAAGAAATGGCGGGAATAACCCGGAAAAACAAGTGGAATCCTACTC
CGGAAAGTGGAACCTTATCCAGAACGACGGCATCAGTCATAAATTCGTTA
TTTCCTACCGAGAAAGCAAAAATTTAGACTCACTCGGGAATAGACCTTTT
CATAAATTACGTCACGAACAACACTTGCCTTGTTTTGAAATTATTGCCAT
GGTGATTAACTCCCAGTTTTATAAAAACAACTTTCAATTCATAAAAAAAT
TATTTCATGTCTCAAGGGACATAATCACCATAGTAATTGTTTGGATACGA
GGCAAGTGAAAAGTTTGACAAAATTTTCTTTCTTACCTTATCCGTAGAAT
TCAAGCTCAAAGTTAAAGGTGCATCTTGGCTTGTGACGTTCTTCTCGAAT
TTAACAACACCT Coding sequence (CDS) from alignment at sc0000302_pilon:367492..371603- >XLOC_043197.2 ID=XLOC_043197.2|Name=XLOC_043197.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=972bp|location=Sequence derived from alignment at sc0000302_pilon:367492..371603- (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGATACCTTT
AGAAAAATGTAAAAATTGTGTCCGCAAACTTTTGTATGTTTTTGAATCGA
TACCTTTAGAAAAAACTGAAAGCAAGCTCATCATTCTTAAGCAGTTCAGA
CTGAAAGCAAGCTCATCATTCTTAAGCAGTTCAGTCTCTGTATACATGTT
TCAACAAAATTCAACGAATCTTTATATTGCGTGTCCTCAAACATTGCTTA
AAAGAAGATCTCTGTATACATGTTTCAACAAAATTCAACGAATCTTTATA
TTGCGTGTCCTCAAACATTGCTTAAAAGAAGACCAATACATCTTCAAAGC
TTCCCTCCGTTTTCTTATTCATGATGGCCTCACATGCACCAATGTCCAAT
ACATCTTCAAAGCTTCCCTCCGTTTTCTTATTCATGATGGCCTCACATGC
ACCAATGTGTAGTGCTAATGATTTGTGTTGTGATTTCAACTCTTTCAAAT
CTTCCGAAACAAATTGCTTGAAATCCGACACCGAAGATAAATTATCTTTT
TTCTGTAGTGCTAATGATTTGTGTTGTGATTTCAACTCTTTCAAATCTTC
CGAAACAAATTGCTTGAAATCCGACACCGAAGATAAATTATCTTTTTTCT
CATATCCACTCTGTAATTGTCTTGCTTTTGAACTCAACAGGGGAAACACT
CCTGTGATATGCATCCCTCGAATCTCAGCGAAAACCATATCCACTCTGTA
ATTGTCTTGCTTTTGAACTCAACAGGGGAAACACTCCTGTGATATGCATC
CCTCGAATCTCAGCGAAAACCTTATCCGTAGAATTCAAGCTCAAAGTTAA
AGGTGCATCTTGGCTTGTGACGTTCTTCTCGAATTTAACAACACCTCTTA
TCCGTAGAATTCAAGCTCAAAGTTAAAGGTGCATCTTGGCTTGTGACGTT
CTTCTCGAATTTAACAACACCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000302_pilon | genome | sc0000302_pilon:367492..371603 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-486:76 |
| Aaloc | 328-408:1561 |
| Aaloc | 232-324:2198 |
| Aaloc | 169-228:2618 |
| Aaloc | 94-165:3182 |
| Aaloc | 58-90:3845 |
| Aaloc | 1-57:4113 |
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