|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000424_pilon:194750..196480+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043174 ID=XLOC_043174|Name=XLOC_043174|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1731bp|location=Sequence derived from alignment at sc0000424_pilon:194750..196480+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCATCATTATCTGGGGGAATGTCACCCATGATAGGGAAGCATTTCA
TAGAATGGGTCGGTACAAAGCATACATTATAGGGGACTATGCCATCATCC
CCACTCTCAAGATAGGTGGCGCTATTCAACACGCTGTAAAGGAAAAATAT
TACCAATTGGACAACGGGCTAATCCTTGAAAAAGCCACTAGGACGTATGA
GAGCAACGCAAAAAGTAGAGGTGGTAGAGGGGCGCGAAGTTCGGATAAGG
CGCATGAGGGCCTAATAGTGACTGAGGATGGGAACGGCAAAATCATGTGC
AGTAGGGCATATGAACCGACTTTTACTTTTCCGTGTCCTATTAAAAtctt
aacaaaaattgaaaaagagaaaCGTGAAACCGAGGAATTTGAAAGAGTGG
CAGAGGAATACGCCaaaaaaaGCCGGGCCGATCATCAGTCACTGTTGGAA
GCTCATTTAGCCGCAACGGTAGATTTAACATTTTCCCACTTCAGGGCAAT
ATGGCATCAGATATGCCGAGTAAACAAacagttaaagaaaataaagaatt
ggGCAGTCAGGAATTTCCCTTCATCCACCCAGAGTTTGATGTCGGACAGT
TCAGGGTTGGTGATGACCAGCATCGGTGATGCGGTAATGACATATAAGTG
CAAAAGGGTTAAGTCTTACATGGTGCACTGGGACAGGAAAATCAAAGGAA
AATGCTTTCAGCACTTTCCTGTCTACCTACGAAATGAGAATAAAACCGTC
TTCCTCAGGGTGGAGGATCGGAATCTCCTACCGAAATCACGACAAATAAA
TTGCACAAAAAGGGAAAAGCACACAGTTGTGATTTCTAAAAGTAAAAGGG
TATACCACATTGACCATAAAGGGAAAGTAGATATATTAAGGTCAAAATTG
AGAGACCGAATTCGATTCCCCGATATGTTGAACCCTCCCAGAGGATTCAA
CACAAAGATCGTCTTAGAGAACCCGGTTATACTAGATCAGCCTAGTCTAC
TACAAATGATGGCAGAAAGTGAATTTACACTTGGAGAATTAGTTAAACTT
CACCAAGGTGCGACCAAGTCAGGGTCAATAATTGAGGGAATCGGATTGGG
CCTCGCAAGCGTCCTAGAAGCTGCAGGTAATGCAGGGGACAAGGTAATAT
CTAGCTTAGGGACGGCATTGAAGGATACCTTCAATGGCGCCGGAAATGGA
GGAGCAACCCTTGTCAAGGCAATAGGCGAGGGTACAGCAGATGTAATAGA
CAGTACAGGTACAGCGGTCAAGAATTCCTTAACGGGTGTCTCCTACGTTT
TTAAGGAGATATTCGGGGGTATTCCGGGTCTGCTCATCTGGGTCGTCTTG
CTGCCATTGGGGGGTTACATAATCTACCTAAGGGCCACGGGACAACTTGG
AAACTGCGTTTGTGCAGGGTGTAGACAGGGAGTGGATCTAACACCGGAGA
AGAAAACAGAAGCAGAAGTCCCTGAGAGGCCAGATTCCCCGATGACACTA
GAAAAGAGGATGGCTGAACCTTTCCCAATGACTGAACCTTTCCCAATGGA
TGAACCATTCCCAATATATGCGACCATGAGCGGGCCCCCAAAAGAAGCGA
CCGTAGAAACAACGGTCTTAAAAAGAAATAGGGACCACATAAAACGCAGG
CGACAAATAGATCACAGACGTCTTAACAAGGCGATCACGTACCTCGACGC
CCAGACTCTTTTCACCGGAAAAGATACCTAG Coding sequence (CDS) from alignment at sc0000424_pilon:194750..196480+ >XLOC_043174 ID=XLOC_043174|Name=XLOC_043174|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3462bp|location=Sequence derived from alignment at sc0000424_pilon:194750..196480+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCATCATTATCTGGGGGAATGTCACCCATGATAGGGAAGCATTTCA
TAGAATGGGTCGGTACAAAGCATACATTATAGGGGACTATGCCATCATCC
CCACTCTCAAGATAGGTGGCGCTATTCAACACGCTGTAAAGGAAAAATAT
TACCAATTGGACAACGGGCTAATCCTTGAAAAAGCCACTAGGACGTATGA
GAGCAACGCAAAAAGTAGAGGTGGTAGAGGGGCGCGAAGTTCGGATAAGG
CGCATGAGGGCCTAATAGTGACTGAGGATGGGAACGGCAAAATCATGTGC
AGTAGGGCATATGAACCGACTTTTACTTTTCCGTGTCCTATTAAAAtctt
aacaaaaattgaaaaagagaaaCGTGAAACCGAGGAATTTGAAAGAGTGG
CAGAGGAATACGCCaaaaaaaGCCGGGCCGATCATCAGTCACTGTTGGAA
GCTCATTTAGCCGCAACGGTAGATTTAACATTTTCCCACTTCAGGGCAAT
ATGGCATCAGATATGCCGAGTAAACAAacagttaaagaaaataaagaatt
ggGCAGTCAGGAATTTCCCTTCATCCACCCAGAGTTTGATGTCGGACAGT
TCAGGGTTGGTGATGACCAGCATCGGTGATGCGGTAATGACATATAAGTG
CAAAAGGGTTAAGTCTTACATGGTGCACTGGGACAGGAAAATCAAAGGAA
AATGCTTTCAGCACTTTCCTGTCTACCTACGAAATGAGAATAAAACCGTC
TTCCTCAGGGTGGAGGATCGGAATCTCCTACCGAAATCACGACAAATAAA
TTGCACAAAAAGGGAAAAGCACACAGTTGTGATTTCTAAAAGTAAAAGGG
TATACCACATTGACCATAAAGGGAAAGTAGATATATTAAGGTCAAAATTG
AGAGACCGAATTCGATTCCCCGATATGTTGAACCCTCCCAGAGGATTCAA
CACAAAGATCGTCTTAGAGAACCCGGTTATACTAGATCAGCCTAGTCTAC
TACAAATGATGGCAGAAAGTGAATTTACACTTGGAGAATTAGTTAAACTT
CACCAAGGTGCGACCAAGTCAGGGTCAATAATTGAGGGAATCGGATTGGG
CCTCGCAAGCGTCCTAGAAGCTGCAGGTAATGCAGGGGACAAGGTAATAT
CTAGCTTAGGGACGGCATTGAAGGATACCTTCAATGGCGCCGGAAATGGA
GGAGCAACCCTTGTCAAGGCAATAGGCGAGGGTACAGCAGATGTAATAGA
CAGTACAGGTACAGCGGTCAAGAATTCCTTAACGGGTGTCTCCTACGTTT
TTAAGGAGATATTCGGGGGTATTCCGGGTCTGCTCATCTGGGTCGTCTTG
CTGCCATTGGGGGGTTACATAATCTACCTAAGGGCCACGGGACAACTTGG
AAACTGCGTTTGTGCAGGGTGTAGACAGGGAGTGGATCTAACACCGGAGA
AGAAAACAGAAGCAGAAGTCCCTGAGAGGCCAGATTCCCCGATGACACTA
GAAAAGAGGATGGCTGAACCTTTCCCAATGACTGAACCTTTCCCAATGGA
TGAACCATTCCCAATATATGCGACCATGAGCGGGCCCCCAAAAGAAGCGA
CCGTAGAAACAACGGTCTTAAAAAGAAATAGGGACCACATAAAACGCAGG
CGACAAATAGATCACAGACGTCTTAACAAGGCGATCACGTACCTCGACGC
CCAGACTCTTTTCACCGGAAAAGATACCTAGATGTCCATCATTATCTGGG
GGAATGTCACCCATGATAGGGAAGCATTTCATAGAATGGGTCGGTACAAA
GCATACATTATAGGGGACTATGCCATCATCCCCACTCTCAAGATAGGTGG
CGCTATTCAACACGCTGTAAAGGAAAAATATTACCAATTGGACAACGGGC
TAATCCTTGAAAAAGCCACTAGGACGTATGAGAGCAACGCAAAAAGTAGA
GGTGGTAGAGGGGCGCGAAGTTCGGATAAGGCGCATGAGGGCCTAATAGT
GACTGAGGATGGGAACGGCAAAATCATGTGCAGTAGGGCATATGAACCGA
CTTTTACTTTTCCGTGTCCTATTAAAAtcttaacaaaaattgaaaaagag
aaaCGTGAAACCGAGGAATTTGAAAGAGTGGCAGAGGAATACGCCaaaaa
aaGCCGGGCCGATCATCAGTCACTGTTGGAAGCTCATTTAGCCGCAACGG
TAGATTTAACATTTTCCCACTTCAGGGCAATATGGCATCAGATATGCCGA
GTAAACAAacagttaaagaaaataaagaattggGCAGTCAGGAATTTCCC
TTCATCCACCCAGAGTTTGATGTCGGACAGTTCAGGGTTGGTGATGACCA
GCATCGGTGATGCGGTAATGACATATAAGTGCAAAAGGGTTAAGTCTTAC
ATGGTGCACTGGGACAGGAAAATCAAAGGAAAATGCTTTCAGCACTTTCC
TGTCTACCTACGAAATGAGAATAAAACCGTCTTCCTCAGGGTGGAGGATC
GGAATCTCCTACCGAAATCACGACAAATAAATTGCACAAAAAGGGAAAAG
CACACAGTTGTGATTTCTAAAAGTAAAAGGGTATACCACATTGACCATAA
AGGGAAAGTAGATATATTAAGGTCAAAATTGAGAGACCGAATTCGATTCC
CCGATATGTTGAACCCTCCCAGAGGATTCAACACAAAGATCGTCTTAGAG
AACCCGGTTATACTAGATCAGCCTAGTCTACTACAAATGATGGCAGAAAG
TGAATTTACACTTGGAGAATTAGTTAAACTTCACCAAGGTGCGACCAAGT
CAGGGTCAATAATTGAGGGAATCGGATTGGGCCTCGCAAGCGTCCTAGAA
GCTGCAGGTAATGCAGGGGACAAGGTAATATCTAGCTTAGGGACGGCATT
GAAGGATACCTTCAATGGCGCCGGAAATGGAGGAGCAACCCTTGTCAAGG
CAATAGGCGAGGGTACAGCAGATGTAATAGACAGTACAGGTACAGCGGTC
AAGAATTCCTTAACGGGTGTCTCCTACGTTTTTAAGGAGATATTCGGGGG
TATTCCGGGTCTGCTCATCTGGGTCGTCTTGCTGCCATTGGGGGGTTACA
TAATCTACCTAAGGGCCACGGGACAACTTGGAAACTGCGTTTGTGCAGGG
TGTAGACAGGGAGTGGATCTAACACCGGAGAAGAAAACAGAAGCAGAAGT
CCCTGAGAGGCCAGATTCCCCGATGACACTAGAAAAGAGGATGGCTGAAC
CTTTCCCAATGACTGAACCTTTCCCAATGGATGAACCATTCCCAATATAT
GCGACCATGAGCGGGCCCCCAAAAGAAGCGACCGTAGAAACAACGGTCTT
AAAAAGAAATAGGGACCACATAAAACGCAGGCGACAAATAGATCACAGAC
GTCTTAACAAGGCGATCACGTACCTCGACGCCCAGACTCTTTTCACCGGA
AAAGATACCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000424_pilon | genome | sc0000424_pilon:194750..196480 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1731:1 |
|
