|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:984649..985836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043164 ID=XLOC_043164|Name=XLOC_043164|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1188bp|location=Sequence derived from alignment at sc0000089_pilon:984649..985836+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCGACAATCATGGTGCGTGACAGTATCGCCGCCAAATACCTTTT
TGATCCAGAGTATATCACCAAAGGCTGCATTTTAGGATTCGCAGGTGTTT
CATACAACCATTGCATGACAAAGGGTAGATATCCGTCCATATTTTGTAAC
GGTGCTGATCATgacgaaaagaaagaaaattcattgaagGTGTTTCACCA
ACGCTTTGGAGAAATCAAGGTTGCTGATATGAACAAAATTGTTCAAGGAG
GGTTCGAATCTTTCAATGATTTGAAAGAAGGAGATGATTTTGAAGTTGCT
GTTGATAAAATGGCTTTTCATTTTAATGCCTTCCTAGTTCTTGGGAAGGT
GATACCTGACCATGCTAACTATAGGGATTGGTTTGAACGGTGTATTCGAC
CAGATTTGAAACAAAAACTATTATGGCCGTTCCTATACAAGCATGACGAG
AGGGTCACCGAGGAAGTCTTTCGCCAAGTCAGCGAGACACCAACCATTAA
AAACCTTGAGAAAATAGCACCTAACATGACTGATACAAAAGAAGGGAGCA
CTCTTGATTTGATGTTTAACACTTACTTCAATGGTTCCCCTTTGCTTGGC
AAATATGCTATTTCATGCTTAGCTCGTTATGTTGATTCATTGACTGATGA
AGAACGCCAGAGTTTGAAAGCAGAAGCTGATCACTTCTTGGAACAAGATC
CTTCACAGTATGACGAATCATTCGAAGGATTAGAATTGATCAATTCATTT
GTACTTGAAGTTTTGCGATTGAATCCGGTTCATATTACCGGAACTTATGG
TAAAGCTAGAAAGGACTTTGTAATGGAGTCAAAAACAGGGAGGTATCAAA
TCTACAAAGATGACTTGATCACTGATTGTGTTATGGAGATGCATAGAGAT
CCAAGCGTCTTTGAGGAACCATCGAAGGTTAAATTGACACGTGACAACCA
GAAGGTAAAGGAGAACCTTGTCAACTTTGGGGGACCATGGTTACAAGAAT
CTACATCTACTAATCGCAAATGTCCTGGTCAAAACATGATGTATATGGGG
TTGAAATTGTTCGTCATCCATTTAACGCGATCTACGTTTGACGTTAAATC
AGATCTTACATACACCGGCAAAAATCCAAAACGAGGCTACGGTACTGATA
TCCCGGTAGTGATGAAGAAATTTGCTTATAATAAATAA Coding sequence (CDS) from alignment at sc0000089_pilon:984649..985836+ >XLOC_043164 ID=XLOC_043164|Name=XLOC_043164|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2376bp|location=Sequence derived from alignment at sc0000089_pilon:984649..985836+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCGACAATCATGGTGCGTGACAGTATCGCCGCCAAATACCTTTT
TGATCCAGAGTATATCACCAAAGGCTGCATTTTAGGATTCGCAGGTGTTT
CATACAACCATTGCATGACAAAGGGTAGATATCCGTCCATATTTTGTAAC
GGTGCTGATCATgacgaaaagaaagaaaattcattgaagGTGTTTCACCA
ACGCTTTGGAGAAATCAAGGTTGCTGATATGAACAAAATTGTTCAAGGAG
GGTTCGAATCTTTCAATGATTTGAAAGAAGGAGATGATTTTGAAGTTGCT
GTTGATAAAATGGCTTTTCATTTTAATGCCTTCCTAGTTCTTGGGAAGGT
GATACCTGACCATGCTAACTATAGGGATTGGTTTGAACGGTGTATTCGAC
CAGATTTGAAACAAAAACTATTATGGCCGTTCCTATACAAGCATGACGAG
AGGGTCACCGAGGAAGTCTTTCGCCAAGTCAGCGAGACACCAACCATTAA
AAACCTTGAGAAAATAGCACCTAACATGACTGATACAAAAGAAGGGAGCA
CTCTTGATTTGATGTTTAACACTTACTTCAATGGTTCCCCTTTGCTTGGC
AAATATGCTATTTCATGCTTAGCTCGTTATGTTGATTCATTGACTGATGA
AGAACGCCAGAGTTTGAAAGCAGAAGCTGATCACTTCTTGGAACAAGATC
CTTCACAGTATGACGAATCATTCGAAGGATTAGAATTGATCAATTCATTT
GTACTTGAAGTTTTGCGATTGAATCCGGTTCATATTACCGGAACTTATGG
TAAAGCTAGAAAGGACTTTGTAATGGAGTCAAAAACAGGGAGGTATCAAA
TCTACAAAGATGACTTGATCACTGATTGTGTTATGGAGATGCATAGAGAT
CCAAGCGTCTTTGAGGAACCATCGAAGGTTAAATTGACACGTGACAACCA
GAAGGTAAAGGAGAACCTTGTCAACTTTGGGGGACCATGGTTACAAGAAT
CTACATCTACTAATCGCAAATGTCCTGGTCAAAACATGATGTATATGGGG
TTGAAATTGTTCGTCATCCATTTAACGCGATCTACGTTTGACGTTAAATC
AGATCTTACATACACCGGCAAAAATCCAAAACGAGGCTACGGTACTGATA
TCCCGGTAGTGATGAAGAAATTTGCTTATAATAAATAAATGGAATCGACA
ATCATGGTGCGTGACAGTATCGCCGCCAAATACCTTTTTGATCCAGAGTA
TATCACCAAAGGCTGCATTTTAGGATTCGCAGGTGTTTCATACAACCATT
GCATGACAAAGGGTAGATATCCGTCCATATTTTGTAACGGTGCTGATCAT
gacgaaaagaaagaaaattcattgaagGTGTTTCACCAACGCTTTGGAGA
AATCAAGGTTGCTGATATGAACAAAATTGTTCAAGGAGGGTTCGAATCTT
TCAATGATTTGAAAGAAGGAGATGATTTTGAAGTTGCTGTTGATAAAATG
GCTTTTCATTTTAATGCCTTCCTAGTTCTTGGGAAGGTGATACCTGACCA
TGCTAACTATAGGGATTGGTTTGAACGGTGTATTCGACCAGATTTGAAAC
AAAAACTATTATGGCCGTTCCTATACAAGCATGACGAGAGGGTCACCGAG
GAAGTCTTTCGCCAAGTCAGCGAGACACCAACCATTAAAAACCTTGAGAA
AATAGCACCTAACATGACTGATACAAAAGAAGGGAGCACTCTTGATTTGA
TGTTTAACACTTACTTCAATGGTTCCCCTTTGCTTGGCAAATATGCTATT
TCATGCTTAGCTCGTTATGTTGATTCATTGACTGATGAAGAACGCCAGAG
TTTGAAAGCAGAAGCTGATCACTTCTTGGAACAAGATCCTTCACAGTATG
ACGAATCATTCGAAGGATTAGAATTGATCAATTCATTTGTACTTGAAGTT
TTGCGATTGAATCCGGTTCATATTACCGGAACTTATGGTAAAGCTAGAAA
GGACTTTGTAATGGAGTCAAAAACAGGGAGGTATCAAATCTACAAAGATG
ACTTGATCACTGATTGTGTTATGGAGATGCATAGAGATCCAAGCGTCTTT
GAGGAACCATCGAAGGTTAAATTGACACGTGACAACCAGAAGGTAAAGGA
GAACCTTGTCAACTTTGGGGGACCATGGTTACAAGAATCTACATCTACTA
ATCGCAAATGTCCTGGTCAAAACATGATGTATATGGGGTTGAAATTGTTC
GTCATCCATTTAACGCGATCTACGTTTGACGTTAAATCAGATCTTACATA
CACCGGCAAAAATCCAAAACGAGGCTACGGTACTGATATCCCGGTAGTGA
TGAAGAAATTTGCTTATAATAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:984649..985836 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1188:1 |
|
