XLOC_043150 (mRNA) -

Overview
NameXLOC_043150
Unique NameXLOC_043150
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000054_pilon:587821..589094-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043150 ID=XLOC_043150|Name=XLOC_043150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1274bp|location=Sequence derived from alignment at sc0000054_pilon:587821..589094- (Clytia hemisphaerica_ch_hm2_pilon)
CTATACATTTTTACTCTTGAGCTCTCTTTTCATTTTAGGAACACTAAAAC AATACTAGAAGAATAATACCAAAATGACTGCAGTTGAAAAATTATTAAAA TTATATAGCGCTTGGTCTTGCCCGTATGCTCAACGAGCTTGGATTGGTTT ATTATTCAAGGAGATTCCTTTTGATTATATAGAACAAGACCCTTACAACA AGACACCTGAATGGTTGGCAATAAACCCACGTGGTCTTGTCCCTGCAATG GTATTGGCTGATGGAAAAGTAGTGTATGAAAGCTCAATTTGTCTTGAATA CCTGGACGAAGCTTATCCTGAAACAGCGAATCAAATTTTACCAAAAGATG CTTATCAGAGGGCGTATTGTCGTATTTGGGGCGACTTCGTTTCGGGCAAT ATAGGAGCGCCCTTGTATGCTATTTTATCCAAGAAAGGAGAAGAAAGAGA AGAGTCAAAAAAGAAATTGGTTGCTAAGCTTGAACAGTTTATGAAGGTAA GTAAGTATAAGTAAACATTTTTTAAATGACATGACAGCCTTTATTTGTTT ATTTGAATCGGTCGAATGCACCCATCGAATATTCGTTGTCACTAAAACGG GTTCTTTTTGCCCCCCCCTCGTAGTGGCGCCCGATTTTAAGAAGACCGTA CGCGTGGACAAAAAAAATGAAGGTCTCAAATTAGACCCTTACAGTGAAGA GAAAACTTAGCCAAAATTTGAGCAAAAATATGACAATTATTGTGCCCTTC TTTTATTATATTTTTCTGGATTTTGCAAAAGTTTGGCTTTGGATTTCTCA TTCTATACATCCTTAGAGTGCACTTTGGAAAGCCCGAGAACTAATTCTTA AGTGCTCTACCTACGGTAGGTCGTCTAACGTTGAGTATTGCCCCACTTCA GGCTAAAGGGTAGAACCAGGCTTTTTAGATCAAACAGAGGATTTTTATTT TGATAGCTGTAAATATGCTTAACACTTAACAAACACGGGACCGTTGAGAG GATGCTTCATCTTTTATTTCAGGAATTCAAAGGTCCTTTCTTCAATGGTG ATCATTTTGGATATGTTGATATAATGGTGGTACCTTTCTTATTACGATTG GATGTTCTTAAGCATTTCCGTAATTTTCATCCAGCCGATGAAATACCAGA TGCAACGTTAAAACAACGTTTTCTGGACTGGGATAAAGCATTAAGAAACC ACCATGCTGTTGCTCCGACCATCGCTACTGTCCAACAATTTGTAGAGAAG TACAATGGGAAATATGATGATTAA

Coding sequence (CDS) from alignment at sc0000054_pilon:587821..589094-

>XLOC_043150 ID=XLOC_043150|Name=XLOC_043150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1496bp|location=Sequence derived from alignment at sc0000054_pilon:587821..589094- (Clytia hemisphaerica_ch_hm2_pilon)
CTATACATTTTTACTCTTGAGCTCTCTTTTCATTTTAGGAACACTAAAAC
AATACTAGAAGAATAATACCAAAATGACTGCAGTTGAAAAATTATTAAAA
TTATATAGCGCTTGGTCTTGCCCGTATGCTCAACGAGCTTGGATTGGTTT
ATTATTCAAGGAGATTCCTTTTGATTATATAGAACAAGACCCTTACAACA
AGACACCTGAATGGTTGGCAATAAACCCACGTGGTCTTGTCCCTGCAATG
GTATTGGCTGATGGAAAAGTAGTGTATGAAAGCTCAATTTGTCTTGAATA
CCTGGACGAAGCTTATCCTGAAACAGCGAATCAAATTTTACCAAAAGATG
CTTATCAGAGGGCGTATTGTCGTATTTGGGGCGACTTCGTTTCGGGCAAT
ATAGGAGCGCCCTTGTATGCTATTTTATCCAAGAAAGGAGAAGAAAGAGA
AGAGTCAAAAAAGAAATTGGTTGCTAAGCTTGAACAGTTTATGAAGCTAT
ACATTTTTACTCTTGAGCTCTCTTTTCATTTTAGGAACACTAAAACAATA
CTAGAAGAATAATACCAAAATGACTGCAGTTGAAAAATTATTAAAATTAT
ATAGCGCTTGGTCTTGCCCGTATGCTCAACGAGCTTGGATTGGTTTATTA
TTCAAGGAGATTCCTTTTGATTATATAGAACAAGACCCTTACAACAAGAC
ACCTGAATGGTTGGCAATAAACCCACGTGGTCTTGTCCCTGCAATGGTAT
TGGCTGATGGAAAAGTAGTGTATGAAAGCTCAATTTGTCTTGAATACCTG
GACGAAGCTTATCCTGAAACAGCGAATCAAATTTTACCAAAAGATGCTTA
TCAGAGGGCGTATTGTCGTATTTGGGGCGACTTCGTTTCGGGCAATATAG
GAGCGCCCTTGTATGCTATTTTATCCAAGAAAGGAGAAGAAAGAGAAGAG
TCAAAAAAGAAATTGGTTGCTAAGCTTGAACAGTTTATGAAGGAATTCAA
AGGTCCTTTCTTCAATGGTGATCATTTTGGATATGTTGATATAATGGTGG
TACCTTTCTTATTACGATTGGATGTTCTTAAGCATTTCCGTAATTTTCAT
CCAGCCGATGAAATACCAGATGCAACGTTAAAACAACGTTTTCTGGACTG
GGATAAAGCATTAAGAAACCACCATGCTGTTGCTCCGACCATCGCTACTG
TCCAACAATTTGTAGAGAAGTACAATGGGAAATATGATGATTAAGAATTC
AAAGGTCCTTTCTTCAATGGTGATCATTTTGGATATGTTGATATAATGGT
GGTACCTTTCTTATTACGATTGGATGTTCTTAAGCATTTCCGTAATTTTC
ATCCAGCCGATGAAATACCAGATGCAACGTTAAAACAACGTTTTCTGGAC
TGGGATAAAGCATTAAGAAACCACCATGCTGTTGCTCCGACCATCGCTAC
TGTCCAACAATTTGTAGAGAAGTACAATGGGAAATATGATGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043150XLOC_043150-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054_pilongenomesc0000054_pilon:587821..589094 -
Properties
Property NameValue
Aaloc496-747:253
Aaloc58-495:1217
Aaloc1-57:1275