|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000054_pilon:383737..387006- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043144 ID=XLOC_043144|Name=XLOC_043144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3270bp|location=Sequence derived from alignment at sc0000054_pilon:383737..387006- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGTCACGATTAGCAAAAAAGATGAAATTTCTTCAAGTTTTTTTAAA
CCTTTTCATATTTCGCTTATCAATATGTCACAATATCTTACGTTGGTCAG
ATATCAGAATCGCGAAATTTGTTCTCCGTCATACGGACAAGGTTCGCGCA
CAAACTCCGTACCGGGAATTCACCATTTTTGATGAAGCAGCTTGTATTGA
TCGTTGCGTAGAAGACGGATCGGCGCCTTGTAAATCCGTTAATTTTTTCC
GCAACGAAACCGATGTTAACCAAAGTATCTGCCAGCTTCTTTCTGCTGAT
ATCACCGACACCAATGAATACACCAATAAACCGGGATGGCGTCATTTTGA
TACCGGAAAAACCCGATTAACCCGTTTAATGCATTCGGATGGTTATTGTT
TTGTGCCAAATGCAGCTTCATGTGTTTTTAGCTCATCAGTACTCTCACTT
CGTCCCATGAGCGAGTGTGACGTTATTGAAGCGTGGTTCGATTTTGATCG
AAATACAGGAATTATTTCACATGTCTGCAGTGGAAAAGCTCTTTGTCCGG
GATCAAGGACTTTCGGTAATGACATAACCTTAATCAATTTTGGCGATTGT
GAATTTTACAAGTTGGATTCTTACGAGAGGGAGAAGTTTCGAATTCATAT
GAGTAAGTTTCTAATAAATTTCTTTTAGCCTCCTTAAACTTGACGCTCTT
CTAATAATAGTGTATTAAAATATTCTAAAGATCTGAGACGTAAATCCAGA
GATCTCAGTGAATATAAGAATGTCTTGTCCACTAAACCCGTAAACCTTTA
AGTACCGATACACGAATTAAATAATGGTAATTTTTTTGAACACATAAATA
GAGAGAGCTTCGATTTGACGGATAACTATTGTACCAAATTTTATAATAAA
ACTCTTTTGATAAGTGAACTTTCTATAATAATTGTATCACTTAAAGTTCA
GCTAAGTTTCCGATAGAATAAAATGTCAACATTTCTTTTCTTCCTCAGAG
ATGTCTTTCTTGAGTTTTACGTTGGTTGTGCATGTCAATATCCACTCACA
GGCAGTGTGGCAGGCAATACACTCCGTTTGACCCATTTTGGCAATTGCGA
TAATCCAGCATGTCAAATGAGATACGATTTTGGTAAGATGTTTTTTCCTT
TCACTTTCATGGCTTTTATTATCGCCTCGACGTGTAATGAATTGATCTCT
TCCAAAAAACCTCTCGAAATAGGAGATTGAAGATGTATTATTCAGTAACT
ATTATCCAGCGACCGTAGTGTAATGGTAGAGCATTCGGCTACGATTTGCA
AGGTTGCGAGTTCAACCTCCAGCCAGGTCATACCAAAGATTCCCAAAATG
GTACTTGATGCCTCTCTGCTTGATGCTCAGTAATTAAGAGAAGGATAAGG
GTAAGTGGAGCAATCCAGGGAGAAAAAGTGGAGTCCTCCCTTACCTTCGG
GTATAGCTATCAAAAGTGGAGCCTTCGGGTCGCCTCCGACTGCGGTCGCA
GACTTACTTATCCTGGGCTATTGGAAAATACTGAAAAATCGGCCTATCTC
TATGTGGTGAATTTGGTGTTTTTAGTTTAGAGGAGTAAGACCTGGCTAGG
GGTGAAAATCAAACTTTTTAAAGGTAGATCATTAAAAAAGTGACATAATA
TCTGCCCATTGGAAATAAACTACCTTATTACGCGAATATCACTAGTCGTT
TTATTAACACGAATCGAAAAATTTCGTGTTAATCAAAACCTCCTTAATTT
AGCCATTGCACAACGTTTAAGCTACTTTACCCCGAAATGTAGGTGATCCT
TTTTCTATAAAAGTTCAGGCCAAGTCAAAAATGGTTGTTGAATTTTTTTA
ACGTAATTTATTGCAAAATTGAGAGAGTTTTTCATCATCAATGTTCGGAC
CAGCAAAAATCACGGTGTACTCGCTCATTCGAACTTCTGCTATTCAAATC
TTTCTATAATTTAAAACTGATTAATTTAGAAAAACACTTTCTTTAATTCG
AACTCCTCCGTAGTCTCTTTATTTCGAAAAAATTAGACTCCAACTTTGAG
TTCGAATAAGGGAGAGTTAACGGTAGCGTCTTTTTGTATCAGTTTACCTT
CCTTTTGTTTATTTTACAGAAAACGGACCAGTAAAAGTCACCATTGTCTC
TATATCTGGTGTGCCGTATAACGGTCTTGTAACGAGAATAAGGGCAAAAA
TAAACGCGGGAGAGATCTGGGCAGTGCGTTATATAGATGGCTTGATGTAT
CGTACTCGAGCGCACGATACTTTCGGTACAAAAATGCAGACCATTTTCCA
AGCACCGTCCACGGGAACGTACACATTTTACATCCATGTCGATAAGTATG
CAAAGGTTATGATGAGCACAGACGAAACTAAAGCTAATTTATTATTTCGA
TTGGGTGGTGGACCAATCTTTAACTGGGATGCGTAAGTCTTGAATGCTCG
TTCATAAGTATCCTTACTTTTTAACTTATCGGCAAAAATGTCTTCAGTCA
ATGTTTTCAAATTGGTCACTTCCCTGAACAAAACTTCACTTTTCAAAAGT
ATCCACTGAGTGAGTTCTTCAAAATATCTGTTCTGAAGACTACATTTCAC
AGTCGCAAAGCGTAATGGGTAATCATATGACCACTGCGCGCTAATGACAA
GATTTTTGCGTCTAGCCATAAGAAAGCCGTTATGGAGGCGCAACCAGTCC
TGATTACCCATGATCCATTTCGACTGTGTAATGGCCGATACCACTACTCT
AAGGTCCCGAATAAACCTCTCATCTGCTTATTCGTTTCCGAAAAATTTAT
TTTAGATTAATTTTTTTACCACCTGTTGATGTCGTGTATTTTACAGACCG
GACTTAGATTGCTGTTTTTATTCTCCAAAATCAGCTCTAGTAAAAAAAGG
AGGATTCTCAAAGGCTTAATACGTTTTGTAACATCAAAAACTTTTTCTTT
TTTTTTGATTTTTCTTTGATCACCAAAATAATGGTATATATATAACAACT
ATTTGCCCCCCCCCCCATTTCTGGGTTTTCAATATTACATAATCTTTTCA
TCGAAATTGTGTACCGTAATATGGTAGCACTACTTTTTAATTTTATAGGG
CTGTCGCGAACGAGTACAAAACAGATTTGGAGAAAGACAAGAAATATTAC
ATGGAAATTTACACTTTTGATGATACCGGCGATGATTGGTTCTATCTCTA
TTTCAAAGCACCTGGAAATGGAGGATGGGAGGTCATGGGTTACGAATACC
TTGAACCGTACACTGGTTGA Coding sequence (CDS) from alignment at sc0000054_pilon:383737..387006- >XLOC_043144 ID=XLOC_043144|Name=XLOC_043144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000054_pilon:383737..387006- (Clytia hemisphaerica_ch_hm2_pilon)
GAAATGTCACGATTAGCAAAAAAGATGAAATTTCTTCAAGTTTTTTTAAA
CCTTTTCATATTTCGCTTATCAATATGTCACAATATCTTACGTTGGTCAG
ATATCAGAATCGCGAAATTTGTTCTCCGTCATACGGACAAGGTTCGCGCA
CAAACTCCGTACCGGGAATTCACCATTTTTGATGAAGCAGCTTGTATTGA
TCGTTGCGTAGAAGACGGATCGGCGCCTTGTAAATCCGTTAATTTTTTCC
GCAACGAAACCGATGTTAACCAAAGTATCTGCCAGCTTCTTTCTGCTGAT
ATCACCGACACCAATGAATACACCAATAAACCGGGATGGCGTCATTTTGA
TACCGGAAAAACCCGATTAACCCGTTTAATGCATTCGGATGGTTATTGTT
TTGTGCCAAATGCAGCTTCATGTGTTTTTAGCTCATCAGTACTCTCACTT
CGTCCCATGAGCGAGTGTGACGTTATTGAAGCGTGGTTCGATTTTGATCG
AAATACAGGAATTATTTCACATGTCTGCAGTGGAAAAGCTCTTTGTCCGG
GATCAAGGACTTTCGGTAATGACATAACCTTAATCAATTTTGGCGATTGT
GAATTTTACAAGTTGGATTCTTACGAGAGGGAGAAGTTTCGAATTCATAT
GAGAAATGTCACGATTAGCAAAAAAGATGAAATTTCTTCAAGTTTTTTTA
AACCTTTTCATATTTCGCTTATCAATATGTCACAATATCTTACGTTGGTC
AGATATCAGAATCGCGAAATTTGTTCTCCGTCATACGGACAAGGTTCGCG
CACAAACTCCGTACCGGGAATTCACCATTTTTGATGAAGCAGCTTGTATT
GATCGTTGCGTAGAAGACGGATCGGCGCCTTGTAAATCCGTTAATTTTTT
CCGCAACGAAACCGATGTTAACCAAAGTATCTGCCAGCTTCTTTCTGCTG
ATATCACCGACACCAATGAATACACCAATAAACCGGGATGGCGTCATTTT
GATACCGGAAAAACCCGATTAACCCGTTTAATGCATTCGGATGGTTATTG
TTTTGTGCCAAATGCAGCTTCATGTGTTTTTAGCTCATCAGTACTCTCAC
TTCGTCCCATGAGCGAGTGTGACGTTATTGAAGCGTGGTTCGATTTTGAT
CGAAATACAGGAATTATTTCACATGTCTGCAGTGGAAAAGCTCTTTGTCC
GGGATCAAGGACTTTCGGTAATGACATAACCTTAATCAATTTTGGCGATT
GTGAATTTTACAAGTTGGATTCTTACGAGAGGGAGAAGTTTCGAATTCAT
ATGAATGTCTTTCTTGAGTTTTACGTTGGTTGTGCATGTCAATATCCACT
CACAGGCAGTGTGGCAGGCAATACACTCCGTTTGACCCATTTTGGCAATT
GCGATAATCCAGCATGTCAAATGAGATACGATTTTGATGTCTTTCTTGAG
TTTTACGTTGGTTGTGCATGTCAATATCCACTCACAGGCAGTGTGGCAGG
CAATACACTCCGTTTGACCCATTTTGGCAATTGCGATAATCCAGCATGTC
AAATGAGATACGATTTTGAAAACGGACCAGTAAAAGTCACCATTGTCTCT
ATATCTGGTGTGCCGTATAACGGTCTTGTAACGAGAATAAGGGCAAAAAT
AAACGCGGGAGAGATCTGGGCAGTGCGTTATATAGATGGCTTGATGTATC
GTACTCGAGCGCACGATACTTTCGGTACAAAAATGCAGACCATTTTCCAA
GCACCGTCCACGGGAACGTACACATTTTACATCCATGTCGATAAGTATGC
AAAGGTTATGATGAGCACAGACGAAACTAAAGCTAATTTATTATTTCGAT
TGGGTGGTGGACCAATCTTTAACTGGGATGCAAAACGGACCAGTAAAAGT
CACCATTGTCTCTATATCTGGTGTGCCGTATAACGGTCTTGTAACGAGAA
TAAGGGCAAAAATAAACGCGGGAGAGATCTGGGCAGTGCGTTATATAGAT
GGCTTGATGTATCGTACTCGAGCGCACGATACTTTCGGTACAAAAATGCA
GACCATTTTCCAAGCACCGTCCACGGGAACGTACACATTTTACATCCATG
TCGATAAGTATGCAAAGGTTATGATGAGCACAGACGAAACTAAAGCTAAT
TTATTATTTCGATTGGGTGGTGGACCAATCTTTAACTGGGATGCGGCTGT
CGCGAACGAGTACAAAACAGATTTGGAGAAAGACAAGAAATATTACATGG
AAATTTACACTTTTGATGATACCGGCGATGATTGGTTCTATCTCTATTTC
AAAGCACCTGGAAATGGAGGATGGGAGGTCATGGGTTACGAATACCTTGA
ACCGTACACTGGTTGAGGCTGTCGCGAACGAGTACAAAACAGATTTGGAG
AAAGACAAGAAATATTACATGGAAATTTACACTTTTGATGATACCGGCGA
TGATTGGTTCTATCTCTATTTCAAAGCACCTGGAAATGGAGGATGGGAGG
TCATGGGTTACGAATACCTTGAACCGTACACTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054_pilon | genome | sc0000054_pilon:383737..387006 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1099-1269:172 |
| Aaloc | 787-1095:1150 |
| Aaloc | 655-783:2269 |
| Aaloc | 1-651:3271 |
|
