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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000303_pilon:151269..152698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043142 ID=XLOC_043142|Name=XLOC_043142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1430bp|location=Sequence derived from alignment at sc0000303_pilon:151269..152698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCTTATCGAAGAGAAGGCCCGCTTTATTTCTTGGGATATGCTTTC
AATATACTCTCGAGGATGGCTGCGAAACCTAAAAGTATCTATCCAAGTAT
ATCGAAGATAGGTAAGTACGACTTTATGATGTGGAATTTGGAAAATATAA
TACATTATTGATTAGAAAAAATGTATTCTAATACTGACTTCTCTTGTTTG
CCTCTTCTCGCTGAATCTATTTTACCAATGAAATGCCAAAAATTAGACTA
AAATCTTATATCGTCCATATTGTCTTATATAAAACTTAGGTATTAAAATC
TATTCGTTTATTTTAATTTTTCAGGGAAAGATATCTTCAACATAGATGAC
GTCAATGACAAATTGTCACCCTATATCGTTTTGGTTGGAAATTGTGGAGC
TGGTAAATCGACGATTGCTGAAAAGCTGACAGATGCCAAAGGTCGTGCAT
CGTCGACAAGAGCGAGTTTCACAATAACCGCAGAATATCTTTGGACACCG
GATAAGAGTCTTCTTATCGCCGACACTCCTGGATTAAATTCTCATGAAAA
TGCTTACGAGTATAGTCTAGAGGTTGCTTCTGCCTTTATTCATAAGCCAC
TTTCTAAGCTTTTTGCAGTAGTAGAAGCGCATATCCGTATGAATCAGGTC
ATTGATAACATTAAAACCCACGTTGATAAATTCATTGAACTTCCAGATGA
ACTGATCGGTGTCATTGTAACAAAGATGGATATTGCTAAAGAATGGAATG
AGAGTGAGTTGGCAAAAATTTTGGATGAAGATCTAGGAATCGAGGATGTT
GTCTTTTCCCGGCTTAAAACAAAAGGTAAAGATCTCCAAAAAGCCATACT
GAAGAAGTGTGGCACTCCACAGGCATTTGATCTCGATGGATCATCTTTTC
TCAGGCTGTTTAAGTTTGGCTTGGAACATAGAAAAGTAGTTCGGGTAAAA
TCTCGTTTGGTTAATCGATTCAGAGGTTTCAAGCTCTCCTTTGAACAAAG
GAGGAAAAACTTTGATACTGAAGATCAGACCGATTTATTTTTCGAGTTTA
AAGCTTTCATGGAAATTCAGATTGACGTGATTAAAAAGGAAATGTGCAAA
GAACTTGATTTTACATTTATGCACGACGAAGCAAAGAATTTAAAACATGC
TGCAACTCTAGCATCAATGGTTAACGAAATACGAGCTGTCCTCTATGATG
TTCGTATGGAAGCTCTGAAACACCAAAATGACGCCAGTGGCAGCTACCTC
AGACAATGTCCACATTGTAAGGAGATCTGGACCCTGGTAATTGGTTGTGA
CGGAAAAACCACGTGTGGCAATCGACCTTTAGGAAAGCAAGAATCGGAAC
GGAATGTAATGGCCACATTTTTATTTACCCCTCTGGTAAGTGATCCATCA
GGCAAAAATATCGACCTAGACATTGTTAAA Coding sequence (CDS) from alignment at sc0000303_pilon:151269..152698- >XLOC_043142 ID=XLOC_043142|Name=XLOC_043142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2434bp|location=Sequence derived from alignment at sc0000303_pilon:151269..152698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCTTATCGAAGAGAAGGCCCGCTTTATTTCTTGGGATATGCTTTC
AATATACTCTCGAGGATGGCTGCGAAACCTAAAAGTATCTATCCAAGTAT
ATCGAAGATAGATGTCTCTTATCGAAGAGAAGGCCCGCTTTATTTCTTGG
GATATGCTTTCAATATACTCTCGAGGATGGCTGCGAAACCTAAAAGTATC
TATCCAAGTATATCGAAGATAGGGAAAGATATCTTCAACATAGATGACGT
CAATGACAAATTGTCACCCTATATCGTTTTGGTTGGAAATTGTGGAGCTG
GTAAATCGACGATTGCTGAAAAGCTGACAGATGCCAAAGGTCGTGCATCG
TCGACAAGAGCGAGTTTCACAATAACCGCAGAATATCTTTGGACACCGGA
TAAGAGTCTTCTTATCGCCGACACTCCTGGATTAAATTCTCATGAAAATG
CTTACGAGTATAGTCTAGAGGTTGCTTCTGCCTTTATTCATAAGCCACTT
TCTAAGCTTTTTGCAGTAGTAGAAGCGCATATCCGTATGAATCAGGTCAT
TGATAACATTAAAACCCACGTTGATAAATTCATTGAACTTCCAGATGAAC
TGATCGGTGTCATTGTAACAAAGATGGATATTGCTAAAGAATGGAATGAG
AGTGAGTTGGCAAAAATTTTGGATGAAGATCTAGGAATCGAGGATGTTGT
CTTTTCCCGGCTTAAAACAAAAGGTAAAGATCTCCAAAAAGCCATACTGA
AGAAGTGTGGCACTCCACAGGCATTTGATCTCGATGGATCATCTTTTCTC
AGGCTGTTTAAGTTTGGCTTGGAACATAGAAAAGTAGTTCGGGTAAAATC
TCGTTTGGTTAATCGATTCAGAGGTTTCAAGCTCTCCTTTGAACAAAGGA
GGAAAAACTTTGATACTGAAGATCAGACCGATTTATTTTTCGAGTTTAAA
GCTTTCATGGAAATTCAGATTGACGTGATTAAAAAGGAAATGTGCAAAGA
ACTTGATTTTACATTTATGCACGACGAAGCAAAGAATTTAAAACATGCTG
CAACTCTAGCATCAATGGTTAACGAAATACGAGCTGTCCTCTATGATGTT
CGTATGGAAGCTCTGAAACACCAAAATGACGCCAGTGGCAGCTACCTCAG
ACAATGTCCACATTGTAAGGAGATCTGGACCCTGGTAATTGGTTGTGACG
GAAAAACCACGTGTGGCAATCGACCTTTAGGAAAGCAAGAATCGGAACGG
AATGTAATGGCCACATTTTTATTTACCCCTCTGGTAAGTGATCCATCAGG
CAAAAATATCGACCTAGACATTGTTAAAGGAAAGATATCTTCAACATAGA
TGACGTCAATGACAAATTGTCACCCTATATCGTTTTGGTTGGAAATTGTG
GAGCTGGTAAATCGACGATTGCTGAAAAGCTGACAGATGCCAAAGGTCGT
GCATCGTCGACAAGAGCGAGTTTCACAATAACCGCAGAATATCTTTGGAC
ACCGGATAAGAGTCTTCTTATCGCCGACACTCCTGGATTAAATTCTCATG
AAAATGCTTACGAGTATAGTCTAGAGGTTGCTTCTGCCTTTATTCATAAG
CCACTTTCTAAGCTTTTTGCAGTAGTAGAAGCGCATATCCGTATGAATCA
GGTCATTGATAACATTAAAACCCACGTTGATAAATTCATTGAACTTCCAG
ATGAACTGATCGGTGTCATTGTAACAAAGATGGATATTGCTAAAGAATGG
AATGAGAGTGAGTTGGCAAAAATTTTGGATGAAGATCTAGGAATCGAGGA
TGTTGTCTTTTCCCGGCTTAAAACAAAAGGTAAAGATCTCCAAAAAGCCA
TACTGAAGAAGTGTGGCACTCCACAGGCATTTGATCTCGATGGATCATCT
TTTCTCAGGCTGTTTAAGTTTGGCTTGGAACATAGAAAAGTAGTTCGGGT
AAAATCTCGTTTGGTTAATCGATTCAGAGGTTTCAAGCTCTCCTTTGAAC
AAAGGAGGAAAAACTTTGATACTGAAGATCAGACCGATTTATTTTTCGAG
TTTAAAGCTTTCATGGAAATTCAGATTGACGTGATTAAAAAGGAAATGTG
CAAAGAACTTGATTTTACATTTATGCACGACGAAGCAAAGAATTTAAAAC
ATGCTGCAACTCTAGCATCAATGGTTAACGAAATACGAGCTGTCCTCTAT
GATGTTCGTATGGAAGCTCTGAAACACCAAAATGACGCCAGTGGCAGCTA
CCTCAGACAATGTCCACATTGTAAGGAGATCTGGACCCTGGTAATTGGTT
GTGACGGAAAAACCACGTGTGGCAATCGACCTTTAGGAAAGCAAGAATCG
GAACGGAATGTAATGGCCACATTTTTATTTACCCCTCTGGTAAGTGATCC
ATCAGGCAAAAATATCGACCTAGACATTGTTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303_pilon | genome | sc0000303_pilon:151269..152698 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 112-1215:1105 |
| Aaloc | 43-108:1387 |
| Aaloc | 1-42:1431 |
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