|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:966950..970288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043140 ID=XLOC_043140|Name=XLOC_043140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3339bp|location=Sequence derived from alignment at sc0000089_pilon:966950..970288+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGCATACTCAGTCGATGATGCCTGGTGTTCCACAGCAAATGCACGG
TGCAGGATTTATTTATCCAAATTTCTACCCACAACAACATCAACAGGTAA
ATTTACATGTCCAACTTCTCCGCCGTTGCTACATGATAGAGCcgcttaac
tttttgatttgaaagagTGGACTTgacacaaaaattttttaatctttgCT
TATAAGTCTTGAAAGAGTTTTGAATACTGAGAACTAGAACCgctaaaaaa
tatcaaaaaaatattaaagtctTCCCATCATGTTTGATCTCGTCTCTTCT
AATACAGTCggctctctctctaattcgatgttcaaggaaccaaaaatcat
tttcaaaataaagaaagattcgaGGCTAACGAGTTACAAAGAAAGTTTGA
TACCGCTCTTCTGCTGTGGGGACCAATTatttaattcgaattacagaaag
attaaAATGGTAGAATAACAGAGGTGCAAATTAGAGAGAAAGttgactgt
ttttttatttaagttaGCCATGTGCCTTCTAGCATTTCAAGTCTTGCTTG
CTTGCCTCCATTTACCGGAGGAATCATTCTTGTAAAGAGATTTCTATATA
GTACCGATAAAACGATCTTTAATTCGTGCATCTTAAATGTTGCGAGgaaa
aaaaaaggtgtacaaAGATTAATGTGACTAAGGTATCTAGCAGAGATGTA
GTTGGAGCAGTGGTCAGATATAAATTTTCTGTCCCCTATATCGCTCAATT
TGAACAACAAGTGGCTTTGTGGTTTTAGAGATGCTGGCTAAATTGATCTG
GCctgccagggtgcagtatgcagtgctgatgAGTCCTAATAAGggcgaaa
tgcatatgctgctctgccactcAAATATCCTGAGtcatagttggacagaa
attcttgatttcttcacatatttttgttgtttttttagattGAAACATAT
CTTGGTGAAATCACAGCCTGGAGAGAGACATGTGTACAAAAAGATATCGA
AATGAAATCCCTAAAAGTAAAACTGTTAGCTGTTAACGACAGAAATGAAG
GGTTGAATCACAAGACCGCTCAGCGAAACCAACTTGGCGGAAGCGGTTCG
GTACTGCTGCAAAACGCTGAGGAGCGCATCTCAGAATTGGAGGCAGCCTT
GAAAACGGAAAGAGAAGGTTACGAGAAAACCAAAGCTCTCGAATTTAAAA
GGAATCGTACATTAGTGTTGACCAAAGTAAAGGATTCTTTGTGTCAAATT
AGTTTATTAAAAAAGAAGCTCTCTCGTGAAGAAAGAGAAAATAAGGAAAG
TCGATCACTGCTGATCGATATGGAAGACAAGCTAGTGGACGCCAACAACA
GAAAATAcaacataaaaaagaaattgtttaGGGCTACTAAAGAAACTGAA
GAACTCAAGAAACAACAAGAGATCCTTGAGAAGTCCAATGTTATGAAGAC
TATAGAACTACAAAAGTGTTCAAAAGAATTGGCTTATACCAAAAATAAGT
TGGCGCAAATGGATGAAAAACAGACTGTTTTAGAGGCAAACGTGAACCAG
TTGAAgatagaaaatcaaattttgcgaCTTGCAAAAGCTGATGTCGAGTC
AATCCATGCTACCGTACTGGCAGAAAAGGATGAAAAGTTAGCGCAACTGA
ACACGGAACATAACAACCGACTGGAAATAATGGAGGAAAATATGAATAAA
CTTAAGGTTGAAAACAGTCTTTTGCGATTAACAAAATCCGACGCCAAGGG
AGTGCATGACACTGAGATTGATAGGATGAAGGAGGAAATGGCTCGGTTGA
AGAAAGACCAAAAGGTCCAGGAATCTATTAGAATGGACGAGATAGATCGA
GTAAAGAAATTGAATAGCACGTCGAGGGAGGAGGTGACCGAGAAAGAAAG
AGATCACCAAGAGTTGTTGTCTAAGAAGGGAGCAGAAGTCAAAGGATTAC
AGTGCAAGCTTGATCaaatgaatgaagaaaagctcaatcatgaaaaagaa
gacactaaaagaaagaatgaaacggaagGCGTGATGAAATTGAATGCCAA
ATTAAAGCTAGAGGTAACTCAAGCAGCATCGAGGCACGAAGAAGAACTTG
GTAAAATGTCAGCTGACATGAAAGAGTTAGAACAACAATTTGCTGAATTG
AACCACGACAAGATGaactataataaaaaaatggaaGATGAATTTAACCA
ATTAAAACACACCTTGACTGAATCGAAGGAAGAAAACTTAACCCTTGAGA
AGAAGATGAAAGAAGAATCCAGAAAGATATCCAATTTGGAAAATCGACTC
AATAGTCGGGAAGTTGAGATCCGTGGCCGTTCGGAGGAAATCTCGACAAT
GTCAAAGAAAGCGGCAAGTGATCAAAAGGAAATCAGCAAATTAAGAGTAT
CCTTAGAGAATCACCAAAGCAAGCTGACAAGCGAGAAGAAAAGAAATGAT
TTATTGATCAGGCAACGAAATTGCTATAGAGATGAGGTAAAGCATCTTTT
ACGTTTCGTTTACAAACAGGCACTTTCTTTTCACCTTTATAGAaccttcg
aattagagagagggtTCAATTAATTATCAATGTTTCTTAATATAATTTAT
ACTACAACATATCACATCctaaatgtttttcaaaatcttcttcAGTTATC
TCTATTTACACCATATATTTCAATGACCTttccataaattacgtcacgac
atcacttgcctcgtattcaaacaattaccatggttattatgtcccttgag
acattaaatgattttttatgaatagaaagtagttttaataaaacccactg
ggagttaatcaccatggcaataatttcgaaacgaggcaagcgatgtttgt
gacgtaatttaagAAAAGGTTTATTCACCACTTAAATTTTTAGGATTTAC
AAAGTTTTGTAAATAATCATAAGTTCTGTATTTCCCGTAGGTACATACGA
AATCTTTAGAAGTGACTCGAATATCGAAAAAGCTGGATGCCACAAAGGCG
TATCTCCAAAAGGTTAAAGCCGACGGTGCCAACCAAAAAATGAACAGCAT
GACAGCTACAGCACCGTCCAAGAAAAAACGTAGGAGAAAAAGCAACAAGC
AAGCTGCCACACAAAATTCAATTGAAACTACACAAGCCAAATCCCTTGAA
ATTGTCATTACTAAGAATGATACGGCATTAACTAGCAATAAAAAAGACGG
ACAAGTTCAGCAAAACACAGATCTACGCAACATGACCATGAACAACGAGG
CTAAAAAACCACTGCAAGAAAGGTATacacatttttcttataagaacaac
ttatataagaacataaggcttcgatggacaACATATTAA Coding sequence (CDS) from alignment at sc0000089_pilon:966950..970288+ >XLOC_043140 ID=XLOC_043140|Name=XLOC_043140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4086bp|location=Sequence derived from alignment at sc0000089_pilon:966950..970288+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGCATACTCAGTCGATGATGCCTGGTGTTCCACAGCAAATGCACGG
TGCAGGATTTATTTATCCAAATTTCTACCCACAACAACATCAACAGATGT
GGCATACTCAGTCGATGATGCCTGGTGTTCCACAGCAAATGCACGGTGCA
GGATTTATTTATCCAAATTTCTACCCACAACAACATCAACAGattGAAAC
ATATCTTGGTGAAATCACAGCCTGGAGAGAGACATGTGTACAAAAAGATA
TCGAAATGAAATCCCTAAAAGTAAAACTGTTAGCTGTTAACGACAGAAAT
GAAGGGTTGAATCACAAGACCGCTCAGCGAAACCAACTTGGCGGAAGCGG
TTCGGTACTGCTGCAAAACGCTGAGGAGCGCATCTCAGAATTGGAGGCAG
CCTTGAAAACGGAAAGAGAAGGTTACGAGAAAACCAAAGCTCTCGAATTT
AAAAGGAATCGTACATTAGTGTTGACCAAAGTAAAGGATTCTTTGTGTCA
AATTAGTTTATTAAAAAAGAAGCTCTCTCGTGAAGAAAGAGAAAATAAGG
AAAGTCGATCACTGCTGATCGATATGGAAGACAAGCTAGTGGACGCCAAC
AACAGAAAATAcaacataaaaaagaaattgtttaGGGCTACTAAAGAAAC
TGAAGAACTCAAGAAACAACAAGAGATCCTTGAGAAGTCCAATGTTATGA
AGACTATAGAACTACAAAAGTGTTCAAAAGAATTGGCTTATACCAAAAAT
AAGTTGGCGCAAATGGATGAAAAACAGACTGTTTTAGAGGCAAACGTGAA
CCAGTTGAAgatagaaaatcaaattttgcgaCTTGCAAAAGCTGATGTCG
AGTCAATCCATGCTACCGTACTGGCAGAAAAGGATGAAAAGTTAGCGCAA
CTGAACACGGAACATAACAACCGACTGGAAATAATGGAGGAAAATATGAA
TAAACTTAAGGTTGAAAACAGTCTTTTGCGATTAACAAAATCCGACGCCA
AGGGAGTGCATGACACTGAGATTGATAGGATGAAGGAGGAAATGGCTCGG
TTGAAGAAAGACCAAAAGGTCCAGGAATCTATTAGAATGGACGAGATAGA
TCGAGTAAAGAAATTGAATAGCACGTCGAGGGAGGAGGTGACCGAGAAAG
AAAGAGATCACCAAGAGTTGTTGTCTAAGAAGGGAGCAGAAGTCAAAGGA
TTACAGTGCAAGCTTGATCaaatgaatgaagaaaagctcaatcatgaaaa
agaagacactaaaagaaagaatgaaacggaagGCGTGATGAAATTGAATG
CCAAATTAAAGCTAGAGGTAACTCAAGCAGCATCGAGGCACGAAGAAGAA
CTTGGTAAAATGTCAGCTGACATGAAAGAGTTAGAACAACAATTTGCTGA
ATTGAACCACGACAAGATGaactataataaaaaaatggaaGATGAATTTA
ACCAATTAAAACACACCTTGACTGAATCGAAGGAAGAAAACTTAACCCTT
GAGAAGAAGATGAAAGAAGAATCCAGAAAGATATCCAATTTGGAAAATCG
ACTCAATAGTCGGGAAGTTGAGATCCGTGGCCGTTCGGAGGAAATCTCGA
CAATGTCAAAGAAAGCGGCAAGTGATCAAAAGGAAATCAGCAAATTAAGA
GTATCCTTAGAGAATCACCAAAGCAAGCTGACAAGCGAGAAGAAAAGAAA
TGATTTATTGATCAGGCAACGAAATTGCTATAGAGATGAGattGAAACAT
ATCTTGGTGAAATCACAGCCTGGAGAGAGACATGTGTACAAAAAGATATC
GAAATGAAATCCCTAAAAGTAAAACTGTTAGCTGTTAACGACAGAAATGA
AGGGTTGAATCACAAGACCGCTCAGCGAAACCAACTTGGCGGAAGCGGTT
CGGTACTGCTGCAAAACGCTGAGGAGCGCATCTCAGAATTGGAGGCAGCC
TTGAAAACGGAAAGAGAAGGTTACGAGAAAACCAAAGCTCTCGAATTTAA
AAGGAATCGTACATTAGTGTTGACCAAAGTAAAGGATTCTTTGTGTCAAA
TTAGTTTATTAAAAAAGAAGCTCTCTCGTGAAGAAAGAGAAAATAAGGAA
AGTCGATCACTGCTGATCGATATGGAAGACAAGCTAGTGGACGCCAACAA
CAGAAAATAcaacataaaaaagaaattgtttaGGGCTACTAAAGAAACTG
AAGAACTCAAGAAACAACAAGAGATCCTTGAGAAGTCCAATGTTATGAAG
ACTATAGAACTACAAAAGTGTTCAAAAGAATTGGCTTATACCAAAAATAA
GTTGGCGCAAATGGATGAAAAACAGACTGTTTTAGAGGCAAACGTGAACC
AGTTGAAgatagaaaatcaaattttgcgaCTTGCAAAAGCTGATGTCGAG
TCAATCCATGCTACCGTACTGGCAGAAAAGGATGAAAAGTTAGCGCAACT
GAACACGGAACATAACAACCGACTGGAAATAATGGAGGAAAATATGAATA
AACTTAAGGTTGAAAACAGTCTTTTGCGATTAACAAAATCCGACGCCAAG
GGAGTGCATGACACTGAGATTGATAGGATGAAGGAGGAAATGGCTCGGTT
GAAGAAAGACCAAAAGGTCCAGGAATCTATTAGAATGGACGAGATAGATC
GAGTAAAGAAATTGAATAGCACGTCGAGGGAGGAGGTGACCGAGAAAGAA
AGAGATCACCAAGAGTTGTTGTCTAAGAAGGGAGCAGAAGTCAAAGGATT
ACAGTGCAAGCTTGATCaaatgaatgaagaaaagctcaatcatgaaaaag
aagacactaaaagaaagaatgaaacggaagGCGTGATGAAATTGAATGCC
AAATTAAAGCTAGAGGTAACTCAAGCAGCATCGAGGCACGAAGAAGAACT
TGGTAAAATGTCAGCTGACATGAAAGAGTTAGAACAACAATTTGCTGAAT
TGAACCACGACAAGATGaactataataaaaaaatggaaGATGAATTTAAC
CAATTAAAACACACCTTGACTGAATCGAAGGAAGAAAACTTAACCCTTGA
GAAGAAGATGAAAGAAGAATCCAGAAAGATATCCAATTTGGAAAATCGAC
TCAATAGTCGGGAAGTTGAGATCCGTGGCCGTTCGGAGGAAATCTCGACA
ATGTCAAAGAAAGCGGCAAGTGATCAAAAGGAAATCAGCAAATTAAGAGT
ATCCTTAGAGAATCACCAAAGCAAGCTGACAAGCGAGAAGAAAAGAAATG
ATTTATTGATCAGGCAACGAAATTGCTATAGAGATGAGGTACATACGAAA
TCTTTAGAAGTGACTCGAATATCGAAAAAGCTGGATGCCACAAAGGCGTA
TCTCCAAAAGGTTAAAGCCGACGGTGCCAACCAAAAAATGAACAGCATGA
CAGCTACAGCACCGTCCAAGAAAAAACGTAGGAGAAAAAGCAACAAGCAA
GCTGCCACACAAAATTCAATTGAAACTACACAAGCCAAATCCCTTGAAAT
TGTCATTACTAAGAATGATACGGCATTAACTAGCAATAAAAAAGACGGAC
AAGTTCAGCAAAACACAGATCTACGCAACATGACCATGAACAACGAGGCT
AAAAAACCACTGCAAGAAAGGTATacacatttttcttataagaacaactt
atataagaacataaggcttcgatggacaACATATTAAGTACATACGAAAT
CTTTAGAAGTGACTCGAATATCGAAAAAGCTGGATGCCACAAAGGCGTAT
CTCCAAAAGGTTAAAGCCGACGGTGCCAACCAAAAAATGAACAGCATGAC
AGCTACAGCACCGTCCAAGAAAAAACGTAGGAGAAAAAGCAACAAGCAAG
CTGCCACACAAAATTCAATTGAAACTACACAAGCCAAATCCCTTGAAATT
GTCATTACTAAGAATGATACGGCATTAACTAGCAATAAAAAAGACGGACA
AGTTCAGCAAAACACAGATCTACGCAACATGACCATGAACAACGAGGCTA
AAAAACCACTGCAAGAAAGGTATacacatttttcttataagaacaactta
tataagaacataaggcttcgatggacaACATATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:966950..970288 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1645-2043:2941 |
| Aaloc | 97-1644:939 |
| Aaloc | 1-96:1 |
|
