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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000054_pilon:875044..879451+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043134 ID=XLOC_043134|Name=XLOC_043134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4408bp|location=Sequence derived from alignment at sc0000054_pilon:875044..879451+ (Clytia hemisphaerica_ch_hm2_pilon)
GtatcaacatcaacaagtgtcaGCACATACAAACCAGTCACTACTTCTGT
ccaatcaccatcaccatctaCAAGCAAACCAGTTCCATCGACATCATTGG
CAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATCTCGTCT
ACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACAAATTGA
AGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATtccatcat
catcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACACCAAGT
CTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATCTTCATC
AAGCATCCAGCCCACCACCAGTTCCACTGTCATCCCAACAAGCTCAGTTA
CACCATGTAAGTTCATTTTCTTTGGTAATtattgcggaacgagcgttgaG
CGCGCGAAGCGCGCGAAGCGAGTggagcatcctttctctagatctgcgcA
TGCGAGATGTGGGAATTTTGTTGTatatgcttgaaaaatcaaaaagtcaa
tCAGGTTACCACGTGAAATATCTCCTTTGCTAAACGAAAGCCAAAAAGAT
CTCTTTTGCTACTAAACGATAGCCAAAAGCTGAAGTATCAACCAAatcgt
agtagtagtagtagttatTTTCTTATCGACTCAtgattttatgctgtaaa
aatgatctattttggacttttggtcatttttcatgatgatataattggtg
gttgtcccttttggattttcaaacttgacaatgaaactttcaaacacaca
gccattgatacacagtattttttgtggtgttatgcaTGGCTGAAATtgat
cctgttttggactttgATTTGGTATTGTCGTATTCATcatcggctggcga
ccgttccttttcacttttcaaacccgacacagattttttacaaacatatc
actatgagaattcaatataggatactgaaacacagttcctgtgtaaattt
taacaagattggagaaattttcacagtcagacagtgttatggctgaaaat
aatcatttttggcgaccattccttttgatttttcaaacccgacacagatt
ttttacaaacatatcactatgagaattcagtAaaggatactaaaacacaa
ttcctgtgtaaatttgaacaagatcggagaaagtttcacagtattatggc
tgaaaatgatcgttttggactttgtcgtaatttcgtcgcggctggcgacc
attccttttgatttttcaaacccgacacagattttttacaaacatatcac
tatgagaattcagtaaaggatactaaaacacaattcctgtgtaaatttga
acaagatcggagaaattttcacaatattatggctgaaaatgattgttttg
gactttgtcgtaatttcgtcgcggctggcgaccattccttttgatttttc
aaacccgacacagattttttacaaacatatcactatgagaattcagtaaa
ggatactaaaacacaattcctgtgtaaatttaaacaagattggagaaatt
ttcacagtaattatgctgatgaaaatgatcgttttttggactttgtcgta
atttcgtcgcggctagcgaccgttccttttgatttttcaaacccgacaca
gattttttacaaacatatcactatgagaattcagtaaaggatactaaatc
ACAATTCCTgcgtaaatttgaacaagatcggagaaattttcacagtgtta
gttataactgaaaataatattttttggactttgtcgtaatttcattggct
ggggcgaccgttccttttgaacatttttcaaacgcgaaacaggttttttc
caaatataacaatatttattacatacacactattgaaccattttatttgg
tttatcctactcttctctaagtattatcccagcagaaaaaataatgctta
gctaaaaaccCGTGGCTTAATGgaataaacttttgcggggattaaatttt
gctgatttcgtggatttgggtgtcatccaaCTTTTCATTTCCATCAATTA
CAATAAATCGTTCTTTACAACCAACTTCGGAACAGATGTGATTTATCCAT
AGACTATCaatcattctttttatttcttgaaaattgaaatgacAATAgtt
taaacattgcaaattcTTTCAGGGCTCAGACTTAAGCCCAGCAACCTAAA
TCTCTTGTGTCCTGAATTAGATTCATCTACaaactttcaacttttcaacA
GGAATTGTGAGGGACCTATTTTGTGTGATATCTATGATATCGATATTTAG
TAAAATGAGTTGTGTTTTATACAACTACTCTCGAGTGAAAAATTCCGAGA
GTAAAGGTAGatgttgatttttatcttttattatatattatttattatat
atttttattatatttattatgcacagtaaaaaaagaaatTtgtagttttt
aaattattatactagataatattctattaaaaatgtaaacaatatcATAA
CAGAAAATTTTGATATCAACAATAATTCAATACATCTCATGCCCATTGCT
AAGACCTAGCCGTTTAAAACTCTGTCAAGCTTAACATAAGGGGTATAAct
aatgaagtataagcccggaGGGATAGAAttaggcttatacttcattgggt
atAACGTATTTTTTAAATGGTCCAATTTGTTACGTTGTCGAATTTGAGGA
cttctttttgcaaaattgatttgaagaaaAGCTACCCTATTTCTATTAAC
CTATACTAAACATCACCCACGGTACGAGATAAAAATCCCGCTTTTTAGTG
AAGTGCTCGATACCTTagtacactcatttttttataagcataacgtttat
aagcatactgaagctcaaatttccagaaaaattaagcatatactAAGCAT
ACATTGAGGctgagccaaagaaatttttagaaccataattttcataaatt
tcttacCTAGCATAGCGTTAAGCataactcgaggctgaaaattgagcTTT
AGGCATAGtaagcttcagccgaaatttatcgtatgcttataaaaaaaatt
agtgtaTTAGAATTTTTACTTTCTGCGTCTTCGAGTTGTGAAGGAATTCT
TGCGTTTtacaaactacacgtttttggTGTGGATCGAATCCGTTAGGTAa
tctttggcaattttctcaTTCCTTTTCTTATGTAAATCGAAagtattttt
tacatttttggaagatttGTCAATAACCTTAGCCAGGCAATCAAAAGTAT
GTTTTTTATCGCTTTTAGcagcgagcgcagcgagcgcTGAATTTCCTGAG
TCACAAaacttcgctttgcgaaaacggaacgctcgttccgcaaccccttt
caTGTTGATTTCGACAAGTTGACTGCTCTTGATCGAAGAAATATGTATTT
TGCACAATGTGTTATTTTTCATGTTTCACTAATAATGCcaatattgataa
aatttcctcctttttgaatttcagtgtGTCCCGCTTGTTTCCACAAAGGA
AGTTATTACTCAGTCAATGAGACATGGCAAGATGCAAGCAAATGTATCAA
CTACACTTGTGTCGAAGTCAACAATCCATGTTTCCCAAGCAATGTTTCCA
CACAAATTGAAGTCACGACTCCAGTCTGTCCAAAATGTCCACAGGTAAGA
ATCTCTTCTCCGTTGTAAACAGTAAACATCAATTATTGCAAAGTTTGAAG
AATTCGAGTTAAGTTTTTGTGTACATTTTAAGTTCCATCTGATACGAAAA
AGTTTGCTTTGTATTGACGACTGTTTCGTTGACCACTGTTGACCAGAGAA
AGCTAATGAGTTCGAAATCAAAGCTAAAAGTTATAAACTGAAATACTTAT
CAtgaactttctttttcttcaaaccaGGGATACGATACCGTTGAGGATCC
AACTGCATGTTGTCCAAAATGTGTACCAACCGAAAACATCCCAAGTGTTT
GCAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAATGGAAGACAAAGGA
GTCAAATGTTGGTCCACAAAGAAATACAAACATACTGGATGCGCTGGTCT
TTGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGCATGTTGACGCCGT
CATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACATAACGTCACAATG
CAATGTACTGACGGACATAAATTCTTCGTCGATTTCCATGAATTCGAAAG
CTGTCAATGTAAGATCCAGAAATGTGGTAATAATTATGACACCTCGGGTG
TAGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAGCAAACGATCCTTC
ATTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAATGAAAGAACGTCA
ACGACGCAATTTGTTGAACGATCTTGCAATGTTGCATGCTAACAAGAAGA
AACGTTAA Coding sequence (CDS) from alignment at sc0000054_pilon:875044..879451+ >XLOC_043134 ID=XLOC_043134|Name=XLOC_043134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000054_pilon:875044..879451+ (Clytia hemisphaerica_ch_hm2_pilon)
GtatcaacatcaacaagtgtcaGCACATACAAACCAGTCACTACTTCTGT
ccaatcaccatcaccatctaCAAGCAAACCAGTTCCATCGACATCATTGG
CAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATCTCGTCT
ACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACAAATTGA
AGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATtccatcat
catcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACACCAAGT
CTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATCTTCATC
AAGCATCCAGCCCACCACCAGTTCCACTGTCATCCCAACAAGCTCAGTTA
CACCATGtatcaacatcaacaagtgtcaGCACATACAAACCAGTCACTAC
TTCTGTccaatcaccatcaccatctaCAAGCAAACCAGTTCCATCGACAT
CATTGGCAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATC
TCGTCTACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACA
AATTGAAGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATtc
catcatcatcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACA
CCAAGTCTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATC
TTCATCAAGCATCCAGCCCACCACCAGTTCCACTGTCATCCCAACAAGCT
CAGTTACACCATtgtGTCCCGCTTGTTTCCACAAAGGAAGTTATTACTCA
GTCAATGAGACATGGCAAGATGCAAGCAAATGTATCAACTACACTTGTGT
CGAAGTCAACAATCCATGTTTCCCAAGCAATGTTTCCACACAAATTGAAG
TCACGACTCCAGTCTGTCCAAAATGTCCACAGtgtGTCCCGCTTGTTTCC
ACAAAGGAAGTTATTACTCAGTCAATGAGACATGGCAAGATGCAAGCAAA
TGTATCAACTACACTTGTGTCGAAGTCAACAATCCATGTTTCCCAAGCAA
TGTTTCCACACAAATTGAAGTCACGACTCCAGTCTGTCCAAAATGTCCAC
AGGGATACGATACCGTTGAGGATCCAACTGCATGTTGTCCAAAATGTGTA
CCAACCGAAAACATCCCAAGTGTTTGCAAAGTCAAGAACTTCAGAATTGT
CGAAATCGAAATGGAAGACAAAGGAGTCAAATGTTGGTCCACAAAGAAAT
ACAAACATACTGGATGCGCTGGTCTTTGTGAATCTACCGTCTCTGCCACA
CCAGGAAGCAGCATGTTGACGCCGTCATGTTCTTGTTGTCAACCGTCACG
TGTCGTCAAACATAACGTCACAATGCAATGTACTGACGGACATAAATTCT
TCGTCGATTTCCATGAATTCGAAAGCTGTCAATGTAAGATCCAGAAATGT
GGTAATAATTATGACACCTCGGGTGTAGAGGTGGTCACATCGGGTGGAGG
TGAAGAACGAAGCAAACGATCCTTCATTGAAGACCTCGCCGAAACTGGAT
TAGACCCGAAAATGAAAGAACGTCAACGACGCAATTTGTTGAACGATCTT
GCAATGTTGCATGCTAACAAGAAGAAACGTTAAGGATACGATACCGTTGA
GGATCCAACTGCATGTTGTCCAAAATGTGTACCAACCGAAAACATCCCAA
GTGTTTGCAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAATGGAAGAC
AAAGGAGTCAAATGTTGGTCCACAAAGAAATACAAACATACTGGATGCGC
TGGTCTTTGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGCATGTTGA
CGCCGTCATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACATAACGTC
ACAATGCAATGTACTGACGGACATAAATTCTTCGTCGATTTCCATGAATT
CGAAAGCTGTCAATGTAAGATCCAGAAATGTGGTAATAATTATGACACCT
CGGGTGTAGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAGCAAACGA
TCCTTCATTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAATGAAAGA
ACGTCAACGACGCAATTTGTTGAACGATCTTGCAATGTTGCATGCTAACA
AGAAGAAACGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054_pilon | genome | sc0000054_pilon:875044..879451 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-1107:3878 |
| Aaloc | 409-576:3477 |
| Aaloc | 1-405:1 |
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