XLOC_043133 (mRNA) -

Overview
NameXLOC_043133
Unique NameXLOC_043133
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000054_pilon:852985..856307-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043133 ID=XLOC_043133|Name=XLOC_043133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3323bp|location=Sequence derived from alignment at sc0000054_pilon:852985..856307- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGAGGTAAATACAGAGCTCGAAGATGGTGTAGATACAGAAGAACT AACGTATGGAGTACTGCTTGTAGCTTGGCTTGATGAGCTTGCGATCGATG TCGATGGAGCTGGCTTGCTTGTAGATGGTGATGGTGATTGGACAGAAGTA GTGACTGGTTTGTATGTGCTGACACTTGTTGATGTTGATACACTCGAGGT CGATGATGAGGCAAATGAAGTACTTGACGATGGAATCGGGATAGTAAATG GAGGCTAAAAAAACAAAGTGTTCAAGTTACTTTTGCTTCAGTTAGTTTAA ATTTTGAGATACGAGTCTTCTTTTATTTTCTTCCCTTCTTAATGTTTGAC TAACATTGTGTGACAACAGTTAGACTTTTAAAACAGAGCATTATAATTCA TGTATTCAGCTTATGTATCGCTCTTGATCTTTTCCCACATCATTATTCTC TAAGTTTTATTTTCTTTATAATGTGTTTTAGGTTGATACAAACCTGATAC GTCTTCATAACCAATCAAATCATTGTATTTTGTATACTGGGAGTGGTATT TAAGCCACTTAAGTGAATGACACTTCACATTGATGTATTTCTTTACCGAG ATGATGATGGTGAGATAAAGAAGAAATCTTTATTTACGGCTGCATTCAGG AGTGACCAAGACTATCAGGATACTCTATCACTCTGGTCACAATGTGAAGT GACGGTATTTATACAATTTACAGCCAATAAAAAATATCATTTTTTTTTCT TTATTGAAACATAAACACAGGGTACATTACGAACATATAATACAAAATAG TACTAAACATTAATAAAGTCCCTCCCTCCGCTAGAAACTTAAGTTATATA TATATATAAGGTAGGTCGTAGGTCGTAGGTGTAGGTCGAAAACTGAGGAA CAGATAATGTGTTTTCTTGAAAAATCTTTTGACTCATATTGAGTTACTTC TTTCCATATTAACTCATATTGAGTCGCTTTCTTCCTTGTAGTCACTTTAG ATCACTAGTTTTGCATTGATGGATGTCTATGTCATCATTTTTTCCTTTTC AATTCCAACCTGATTGATTTTCTGTGAATGTTCATTCTAGATTTTTGTTG TATTTATATTGTCTTTTTGTTTTGTGAGTTTTGTCTTTATTGTTTCCATT TTAAGTAGTTGAAGGTTTTATACTTCTTGACTATATATATATATATAAAT ATCTTTTAGGGTTTAAAGGTTTATCTGCTGTCATAAAGTTGCTTAACACA TTTCAACAAAGAAAAATTTCTTAATACTAAGAGAGATTGTTTTGATTTTC CATGGTTTTGCTGCCCTTAAAGAGACCAAAAAAGGGAAAGAACGCAATCC TAACTTAACTTTTTGCTGTTCTTGTAACTGTTGACAACACTTGCGAAGTG AAAAGTCGATCTTGCTTTCCGTATTGCAGCTATTTTTGCTTAAATACCAC TCCCAGTATTCAAAATACAATGATTTGATTGGTTATGAAGAGACGTATTA GGTTTGTATCAACTTAAATCACATTATTTTTACTAAATATTCTTTCTGAA AAAACTAGAAATTTTATCTTTCACTCATAAAAATGAGAGTCTTGATTAAG AGCCATTTTCTGTAAGAACCAGGCAGGTGGTGATAGCAGAAAAACTTGAA TTCCTCCATTTTTGGATATGGTAAACAATAGTGAAAAACTCAGAATCCCA AAATTTCAGGTCCCCAAAATCCATAATGGCGGATTTACAGCCAATAAAAA ATTTCACTTTTTTTGCCCGTTTTCTTTGTCACAACTTTAAGAGGAATTTT TCAAGTTGCAACTAAGATCACATGGGTTTTTATTAATTTTCTTAAAGTAC CCAATTAGTGCTTCCAAAAAAACCAAAAAACCCATGTGACCTTAAACGGA CAAAAAATCGGCTGTAAATCCGCCATTATGGATTTTGGGGACCTGAAATT TTGGGATTCTGAGTTTTTCACTATTGTTTACCATATCCAATATGGAGGAA TTCAAATTTTTCTACTATCACCACCTGCCTGGTTCTTACAGAAAATGACT CTTAAGCTCGTTTTGCTGCACGGTTTAAAAATTGTTCTTAATTTTTAAAG GTTGTACCGTAATTATAAAGAAGATCTTTCATCTATTCTTTCAAACCGCT AGACCAAGAAAGAACATCTTCTATTTCTACGTATGCACAAATTTATTGAT GTATGAATATTAGTAATGTATACTTACGAATGGTGGTTTTGAGGTCGTTC CTGATGAAGGCGTGAATACAACTCCTGAAGATGTTTCCACTACCGACGTC GTAAAACTTTCAACGGTTTGTGTAATCAAAGATTTTGGAAGCTCAGAAAA TCCCTGGTAAAAAAAAAACAATGAATATTTTGAAATAAATTGAAATCAAT GACTCATGTTGAACTTCTTTTTTTCCTTTTGCAACTTGCAAAAAAATACC TACAGAAGTATGCAAATGAAACTACATTCCTATCTCACGGCCCCGGTCGT ATTTTTTTCGACTATGAAATGAAAATTTCTTCGACATCCCAGTGGGGATA TAAATCCTACTGTTCTCAGCTAAAGAAATCGAGTGGGGGTGATTTTGGAG TACAATTTTTCCTTTAAACTTTAAATGAAACCAAAGTCAATTTCCAATTT AATTTACAACAGGGGATTTTCTTCAACCGGGAACAAAATTTTAGCCGAGT TGTCAAGTCGGGCTAAGGTCCAACCGGGTGACACAGCAAAAGAACTAAAA TAGCTAAAATTTTCAAAAAGAATAGGAGGAAGTAGTGGCAAAAAACTAAC CGAAGTTGTAGACAATATAACTGGAGTGCTAGTAACCGGTGGCAAAACAA AACTAGAGGATGGCGATGGTGATGAAACTGAAGTAGTAACTGGTTTGAAT GTGCTGACACTTGTTGATGTTGACACACTTGAACTTTCACTGCTTGAGGT GAATGCTGAGCTCGATGAAGGTGTAGATACTGAAGAACTGACGTATGGTG TGCTACTCGTTTGGCTGGATGAGCTGGCAATCGATGTCGATGGAGCTGGT TTGCTTGTGGATGGTGATGGTGATGAAACTGAAGTAGTAACTGGTTTGAA TGTGCTGACACTTGTTGATGTTGACACACTTGAACTTTCACTGCTTGAGG TGAATGCTGAGCTCGATGATGGTGTAGATACTGAAGAACTGACGTATGGC GTGCTACTCGTTTGGCTTGAGGAGCTGGCAATCGATGTTGATGGAGCTGG TTTGCTTGTGGATGGTGATGGTGATGAAACTGAAGTAGTAACTGGTTTAA ATGTGCTGACACTTGTTGATGTT

Coding sequence (CDS) from alignment at sc0000054_pilon:852985..856307-

>XLOC_043133 ID=XLOC_043133|Name=XLOC_043133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1806bp|location=Sequence derived from alignment at sc0000054_pilon:852985..856307- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGAGGTAAATACAGAGCTCGAAGATGGTGTAGATACAGAAGAACT
AACGTATGGAGTACTGCTTGTAGCTTGGCTTGATGAGCTTGCGATCGATG
TCGATGGAGCTGGCTTGCTTGTAGATGGTGATGGTGATTGGACAGAAGTA
GTGACTGGTTTGTATGTGCTGACACTTGTTGATGTTGATACACTCGAGGT
CGATGATGAGGCAAATGAAGTACTTGACGATGGAATCGGGATAGTAAATG
GAGGATGCTTGAGGTAAATACAGAGCTCGAAGATGGTGTAGATACAGAAG
AACTAACGTATGGAGTACTGCTTGTAGCTTGGCTTGATGAGCTTGCGATC
GATGTCGATGGAGCTGGCTTGCTTGTAGATGGTGATGGTGATTGGACAGA
AGTAGTGACTGGTTTGTATGTGCTGACACTTGTTGATGTTGATACACTCG
AGGTCGATGATGAGGCAAATGAAGTACTTGACGATGGAATCGGGATAGTA
AATGGAGGGAATGGTGGTTTTGAGGTCGTTCCTGATGAAGGCGTGAATAC
AACTCCTGAAGATGTTTCCACTACCGACGTCGTAAAACTTTCAACGGTTT
GTGAATGGTGGTTTTGAGGTCGTTCCTGATGAAGGCGTGAATACAACTCC
TGAAGATGTTTCCACTACCGACGTCGTAAAACTTTCAACGGTTTGTAGAA
TAGGAGGAAGTAGTGGCAAAAAACTAACCGAAGTTGTAGACAATATAACT
GGAGTGCTAGTAACCGGTGGCAAAACAAAACTAGAGGATGGCGATGGTGA
TGAAACTGAAGTAGTAACTGGTTTGAATGTGCTGACACTTGTTGATGTTG
ACACACTTGAACTTTCACTGCTTGAGGTGAATGCTGAGCTCGATGAAGGT
GTAGATACTGAAGAACTGACGTATGGTGTGCTACTCGTTTGGCTGGATGA
GCTGGCAATCGATGTCGATGGAGCTGGTTTGCTTGTGGATGGTGATGGTG
ATGAAACTGAAGTAGTAACTGGTTTGAATGTGCTGACACTTGTTGATGTT
GACACACTTGAACTTTCACTGCTTGAGGTGAATGCTGAGCTCGATGATGG
TGTAGATACTGAAGAACTGACGTATGGCGTGCTACTCGTTTGGCTTGAGG
AGCTGGCAATCGATGTTGATGGAGCTGGTTTGCTTGTGGATGGTGATGGT
GATGAAACTGAAGTAGTAACTGGTTTAAATGTGCTGACACTTGTTGATGT
TAGAATAGGAGGAAGTAGTGGCAAAAAACTAACCGAAGTTGTAGACAATA
TAACTGGAGTGCTAGTAACCGGTGGCAAAACAAAACTAGAGGATGGCGAT
GGTGATGAAACTGAAGTAGTAACTGGTTTGAATGTGCTGACACTTGTTGA
TGTTGACACACTTGAACTTTCACTGCTTGAGGTGAATGCTGAGCTCGATG
AAGGTGTAGATACTGAAGAACTGACGTATGGTGTGCTACTCGTTTGGCTG
GATGAGCTGGCAATCGATGTCGATGGAGCTGGTTTGCTTGTGGATGGTGA
TGGTGATGAAACTGAAGTAGTAACTGGTTTGAATGTGCTGACACTTGTTG
ATGTTGACACACTTGAACTTTCACTGCTTGAGGTGAATGCTGAGCTCGAT
GATGGTGTAGATACTGAAGAACTGACGTATGGCGTGCTACTCGTTTGGCT
TGAGGAGCTGGCAATCGATGTTGATGGAGCTGGTTTGCTTGTGGATGGTG
ATGGTGATGAAACTGAAGTAGTAACTGGTTTAAATGTGCTGACACTTGTT
GATGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043133XLOC_043133-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054_pilongenomesc0000054_pilon:852985..856307 -
Properties
Property NameValue
Aaloc349-903:556
Aaloc256-348:1096
Aaloc1-252:3324