XLOC_043127 (mRNA) -

Overview
NameXLOC_043127
Unique NameXLOC_043127
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000054_pilon:534768..535570-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043127 ID=XLOC_043127|Name=XLOC_043127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=803bp|location=Sequence derived from alignment at sc0000054_pilon:534768..535570- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACCCAAGCCAAAAAACTACACCCTGTCTTCGTTACATGCCAAAAA AAGACCTGCCACTAAGATTACCACTTTACCATCACCACCACTGGCACAAC CTATGAAAAAGGCTATTTACATCTCTCCGCCTTTCTCATCCATCTCTTCT ACTTCTTCTGCTGCCACCAAACCGTTTTTTTTTTCAACCATTGCCACTAA GCCACTCAATTTCCTCCCAGAAAGAAAAATTGTACTAAAAGAAATGTATG CTTTCTCCATCGCCACTATCACAACTAAACCTGCTGCCACGTGCACAACT GCTACCACCAAACCTAAACCATTTCATCAAGCTTTTAAAATTCCAACGTC CTCCATCACCAATGCAACAAAGCCACCTGCAAATCACCTACACCGACCGT AACACCGACAAAGCCACCAAAGAAAAGATAACGTTTAACGATGCACGAGA TATCGCGCTATTTAAAGAAACACTTTATTGTCAACTTTTCAATATACAAA ATAAACACAAGAGCGAAAGGCTAAATGGCTAAAAGTCTCTTCCAAAATGG ATGAGCTTTTTCCCGGTGAAGAGATTCATGAAATCAGGAAAGTCAAGGAC AGATTAGGCAAATCATTGGAAGCATTTAAAAAGAAAAAATAATGCAGAGC TCAAGAGATCTGGGATTGAGGTTGACTACAACGAGAAAGATAGTCTCCTC CAAGATCTCCTTGACGTTGAAAAGACATCCTTGGACATTGAAGAACAAAG AGACGAAGAGACGAAAAAGAAGAAAGAATCGCAACAACAAGGCTTGGAAA TGA

Coding sequence (CDS) from alignment at sc0000054_pilon:534768..535570-

>XLOC_043127 ID=XLOC_043127|Name=XLOC_043127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000054_pilon:534768..535570- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACCCAAGCCAAAAAACTACACCCTGTCTTCGTTACATGCCAAAAA
AAGACCTGCCACTAAGATTACCACTTTACCATCACCACCACTGGCACAAC
CTATGAAAAAGGCTATTTACATCTCTCCGCCTTTCTCATCCATCTCTTCT
ACTTCTTCTGCTGCCACCAAACCGTTTTTTTTTTCAACCATTGCCACTAA
GCCACTCAATTTCCTCCCAGAAAGAAAAATTGTACTAAAAGAAATGTATG
CTTTCTCCATCGCCACTATCACAACTAAACCTGCTGCCACGTGCACAACT
GCTACCACCAAACCTAAAATGTCACCCAAGCCAAAAAACTACACCCTGTC
TTCGTTACATGCCAAAAAAAGACCTGCCACTAAGATTACCACTTTACCAT
CACCACCACTGGCACAACCTATGAAAAAGGCTATTTACATCTCTCCGCCT
TTCTCATCCATCTCTTCTACTTCTTCTGCTGCCACCAAACCGTTTTTTTT
TTCAACCATTGCCACTAAGCCACTCAATTTCCTCCCAGAAAGAAAAATTG
TACTAAAAGAAATGTATGCTTTCTCCATCGCCACTATCACAACTAAACCT
GCTGCCACGTGCACAACTGCTACCACCAAACCTAAAATCTCCTTGACGTT
GAAAAGACATCCTTGGACATTGAAGAACAAAGAGACGAAGAGACGAAAAA
GAAGAAAGAATCGCAACAACAAGGCTTGGAAATGAATCTCCTTGACGTTG
AAAAGACATCCTTGGACATTGAAGAACAAAGAGACGAAGAGACGAAAAAG
AAGAAAGAATCGCAACAACAAGGCTTGGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043127XLOC_043127-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054_pilongenomesc0000054_pilon:534768..535570 -
Properties
Property NameValue
Aaloc316-414:100
Aaloc175-315:627
Aaloc46-174:757
Aaloc1-45:804