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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:414451..418174- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043116 ID=XLOC_043116|Name=XLOC_043116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3724bp|location=Sequence derived from alignment at sc0000260_pilon:414451..418174- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGTAGTACGCTCTCTAAAAGACATCATCTCTATAAAGATTAAACC
AAGACATGATTCACCTTGCGATCAATTCAGTCGTATATTTATGACCAAAA
TGCTACTCATAGCATCTGTCGTAATGGGGTTCCAATATTTCTCGGACAAA
ATCAATTGCCTTCAAGCTCACAAATCTGACGTTTCTAAAGACTTTGTTCA
TGCTGCTTGTTGGATATCCGGGCTCTATGTTTACAAAGAAAGAAAGCTGG
TTGAAAATCAAATATATCCTGGAATTCCGTCAAATTTAAAGATGGACGGT
TTCACATCTGAGAGTTACCATCCTTGTGATTCAACATCGGCATCAAATAT
GGGAGTTGGTATGTGCACCAAATTGACCAGAGAATATTATCTCCATTATC
AATGGATGCCGTTCTACATTGGTGCTTTAGCTATTTTTTATTATCTCCCA
TATGTCTTGTTCAGGATCATCAATGTTGATCTTATCTCCTTAAAGTCAGT
TTTGGAATCGGTTACCGGTGATGCAGACCATATCGTCCGAAATTACTTCA
ACTACAAAATCAATTCCATTGGTAAATTGCGCATGCGTATCTTTTTGAAT
GTCATTGTGAAATGTGCATACGTTATTGCTAACCTTTTCGGTTTCTTTTT
CACTGATTATCTCCTTAATGGTAATTATCGGAATTACGGATTCGACTATA
TGGATTGGGCACGCGATAGCACAGATGAAAACCATATTGGGTTGAGGTAC
AGGAGAAGGATCGAGAAACCAGGTCAGTTTGCATAATAATTATATACCCT
TAATTCGTACCCACCCAGGCACGGTGGAAGCGGGGAGACTTGGGAGACTT
CAGCCTCCCAACTTTTGAGCAAATGAGATTATTTTCTCAAATTCCTAGGG
AATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTTTACGGTTGTTTC
GCCGGGCCTGTGAAATGCAATTAATTTTCTTGAAAATGAGGTTAATGACT
CTCTTCATGAAATTCAGGACGTAATGTTTTATACAGAAGCACCTGAAATA
GCCCTGGTGTTTGCCACTAATTTTATTGTTTAATTTCAAAATGAGTGGTA
AATACCCGGCCTTTTTTGGTGCTTCCGTATAAAACATTACGTCATGAATA
TCACGAATTAAGGAATCCTTTAATTGCAGCCTGGTCAATTTTTTGAATTT
TGCTTGAACTCGTTATTCTCTACTTTCAGATTAGCCTCCGCTCTATATCT
AAGGTGTAAAATATTTTCTTATGTTTATATTTCTGCTATTTACAGCTTGT
TCTACTGAACCTTGTGTCGGAAAATTTTTAACGCTCCAGGGGGTTGCCGG
AGACGTGCTGCTGGAGTTTGAAATTTGGACAATATCAGATAATGAATTAA
TATTTGATGAATTTGGGACCCTGTCACATCCCAAAATCGAACCCTAAAAA
TTGTCCAAATATTCAAGAGTCTCTGTCAGATACACATCTTTAAAACTAGT
GAATTCGGGACCCTGTCAGATATCATTAGAGCCTTAAAATGTGGATCCAG
ACCAACGGCACGCCCTGTACCCAATCTTGCCTAAGTGACTTCCCTAGATT
TATCGCTTTGAATTTAACTGTGTGTTTTCACAATATTTCTTCCACCACAG
GGAACAAATTATTGCCATCCATGGGCATGTGTGACGTTGAAGAATCGGCC
ACAAATCTTGGTGCAACAGCCCACAACAGCCATTCCTTTGTTTGTGAAAT
GTCTACACATGTTCTGTATCAATATGTTCTTTTGGTCATGTGGTTCCTCT
TTGTTGTGTCAATCTCAATATCCATCATTGGATGTTTATCCCAGGTTCTT
GGTTATTTCTTGCATTTCATGTTTGGTCAATTTGGAAGCACACCCAAGAA
AACCATTTTAAGGGTGATCACACTGAGGGAGGCTGAGTATTTGAAATTCA
TCAAATCGAAGAATATGGTGATGTATGGTGAAGTGTTGAGAAAATTAAAA
CAACATCGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGAAAC
AAGTAATGGTTTTGTATGAACTTTTTTTTTTGTTGTTTTTGTTTTGTTTA
GTTTGACAGTTTTTTTTATAAAAGAGCATAAGGCTTCGGTGGCCCAAATA
ATAAGAACAAATTAAGAACATGTTAAGGCTTTGTGGACTCTAAAACACTT
AGAACACTGAACGCTGATCTACTCATAAAGATGATGCATAAATTGCTTCA
GCAATGGACGGAGTAGCTCGATCTAGAGTTTTATCTAAGATGTCTTATTG
TCGAAAGAAGGAACAAAATCAATGAATATACGGTTTTCAACTAAAACAAC
ATCGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGAAACAAGT
AATGGTTTTGTATGAACTTTCTTTTTTGTTGTTTTTGTTTTGTTTAATGA
AAAAGTTTAACAAGTTTTTTTTATAAGAACATACTATATAAGAACATAAG
GCTTCGGTGACCAAAATATTAAGATCAAGTTAAGAGCATCTTAAGGCTCT
GTGGACTCTAAAACACTTGGTTACTTAAAGAAAAGCACTCGGTTACTTTG
ACAAAAGCACTCGAAGAAAATCAGAACATGTAAAGAACATCTGAAAGCTT
CAAAAATTTTGGTTGTTCTCATAAAAATCTTGCATTCTCAATTTAGTAAC
TTTCGTATACAAAAGATGAAGCAGCAGCGTCCAAAAAATACTCGAAAAAC
ATCATGAAACATTTTGTTCTGTTTATCATACTTCAGCATGGTTCAGAGTC
CATAAAACTGTCGTCTTATTTGTATCGATAGAAAAGTATTTGATACAGCA
AAACCTCTCAAAAACCAATATTTCTAACATCCACAGTGGGAAGAATGTCC
ATCATTCAATAACCTTAACACAAGGCTCAATTCATGCTAAACATTCTTAA
ATTCATACTGGCACTGAACAGTGATACTCATAAAGATGGTGCATAATTTG
CTTCAGCCAGGAACGGAGTAGCTCGATCTAGAGTTTTTTATAAGATATCT
GTGTCTGTGTCTTACACGTTTCTTTAAGAACAAACTATATAAGAACATAC
GGCTTCGATAGCCAAAATTTTAAGAACAAGTTAAGAACATTTTAAGGCTT
TGCGGACTCCAAAACACTACATTTCTTAGGAAAATGGACAAAAAATAATA
CTCAAAAAATGGCGAAAATAAGAACATGTTAAGAACATTTCTAGGCTTAA
AACTAGGCTTCTGAAATTTTGGATGTTCTTATAAAAAAACGTGTATTGTC
GAATAAAGGAAAGAAATCAATGAATACGGTTTTCAACTGCACTCAGAGTT
TTTCACTCAGTATATATTCATGATATTAATGACGTAATGTTTTCAACAGA
AACGCCCTGTTTTTTTTCCAGTAGTTTCAAATCTAAGCTAGAGAAAAAAT
GTTGAAATTGCCACTAATGGTAAAAACCAGTGTGTTTCCGTAGAGGACAT
ACCTCATTGATATCATGAATATTAAAAAAATTTTAAAGTCTTATCCAGCG
AATCATTTAACCAACAATACATGCATCTAACAATCATACACATACAAAAC
GTATTCATTTTTTTCTTTTCTTTTTTTCGTTTTAGACACCGCCACGGCGT
TTCTTAAGAATGGTTTCAAAATTCGAGCCTCCGCCCCATCGCCCATTGAA
ATGACGTCATTCAGATTGTGCTGA Coding sequence (CDS) from alignment at sc0000260_pilon:414451..418174- >XLOC_043116 ID=XLOC_043116|Name=XLOC_043116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2526bp|location=Sequence derived from alignment at sc0000260_pilon:414451..418174- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGTAGTACGCTCTCTAAAAGACATCATCTCTATAAAGATTAAACC
AAGACATGATTCACCTTGCGATCAATTCAGTCGTATATTTATGACCAAAA
TGCTACTCATAGCATCTGTCGTAATGGGGTTCCAATATTTCTCGGACAAA
ATCAATTGCCTTCAAGCTCACAAATCTGACGTTTCTAAAGACTTTGTTCA
TGCTGCTTGTTGGATATCCGGGCTCTATGTTTACAAAGAAAGAAAGCTGG
TTGAAAATCAAATATATCCTGGAATTCCGTCAAATTTAAAGATGGACGGT
TTCACATCTGAGAGTTACCATCCTTGTGATTCAACATCGGCATCAAATAT
GGGAGTTGGTATGTGCACCAAATTGACCAGAGAATATTATCTCCATTATC
AATGGATGCCGTTCTACATTGGTGCTTTAGCTATTTTTTATTATCTCCCA
TATGTCTTGTTCAGGATCATCAATGTTGATCTTATCTCCTTAAAGTCAGT
TTTGGAATCGGTTACCGGTGATGCAGACCATATCGTCCGAAATTACTTCA
ACTACAAAATCAATTCCATTGGTAAATTGCGCATGCGTATCTTTTTGAAT
GTCATTGTGAAATGTGCATACGTTATTGCTAACCTTTTCGGTTTCTTTTT
CACTGATTATCTCCTTAATGGTAATTATCGGAATTACGGATTCGACTATA
TGGATTGGGCACGCGATAGCACAGATGAAAACCATATTGGGTTGAGGTAC
AGGAGAAGGATCGAGAAACCAGATGGTAGTAGTACGCTCTCTAAAAGACA
TCATCTCTATAAAGATTAAACCAAGACATGATTCACCTTGCGATCAATTC
AGTCGTATATTTATGACCAAAATGCTACTCATAGCATCTGTCGTAATGGG
GTTCCAATATTTCTCGGACAAAATCAATTGCCTTCAAGCTCACAAATCTG
ACGTTTCTAAAGACTTTGTTCATGCTGCTTGTTGGATATCCGGGCTCTAT
GTTTACAAAGAAAGAAAGCTGGTTGAAAATCAAATATATCCTGGAATTCC
GTCAAATTTAAAGATGGACGGTTTCACATCTGAGAGTTACCATCCTTGTG
ATTCAACATCGGCATCAAATATGGGAGTTGGTATGTGCACCAAATTGACC
AGAGAATATTATCTCCATTATCAATGGATGCCGTTCTACATTGGTGCTTT
AGCTATTTTTTATTATCTCCCATATGTCTTGTTCAGGATCATCAATGTTG
ATCTTATCTCCTTAAAGTCAGTTTTGGAATCGGTTACCGGTGATGCAGAC
CATATCGTCCGAAATTACTTCAACTACAAAATCAATTCCATTGGTAAATT
GCGCATGCGTATCTTTTTGAATGTCATTGTGAAATGTGCATACGTTATTG
CTAACCTTTTCGGTTTCTTTTTCACTGATTATCTCCTTAATGGTAATTAT
CGGAATTACGGATTCGACTATATGGATTGGGCACGCGATAGCACAGATGA
AAACCATATTGGGTTGAGGTACAGGAGAAGGATCGAGAAACCAGGGAACA
AATTATTGCCATCCATGGGCATGTGTGACGTTGAAGAATCGGCCACAAAT
CTTGGTGCAACAGCCCACAACAGCCATTCCTTTGTTTGTGAAATGTCTAC
ACATGTTCTGTATCAATATGTTCTTTTGGTCATGTGGTTCCTCTTTGTTG
TGTCAATCTCAATATCCATCATTGGATGTTTATCCCAGGTTCTTGGTTAT
TTCTTGCATTTCATGTTTGGTCAATTTGGAAGCACACCCAAGAAAACCAT
TTTAAGGGTGATCACACTGAGGGAGGCTGAGTATTTGAAATTCATCAAAT
CGAAGAATATGGTGATGTATGGTGAAGTGTTGAGAAAATTAAAACAACAT
CGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGAAACAAGGAA
CAAATTATTGCCATCCATGGGCATGTGTGACGTTGAAGAATCGGCCACAA
ATCTTGGTGCAACAGCCCACAACAGCCATTCCTTTGTTTGTGAAATGTCT
ACACATGTTCTGTATCAATATGTTCTTTTGGTCATGTGGTTCCTCTTTGT
TGTGTCAATCTCAATATCCATCATTGGATGTTTATCCCAGGTTCTTGGTT
ATTTCTTGCATTTCATGTTTGGTCAATTTGGAAGCACACCCAAGAAAACC
ATTTTAAGGGTGATCACACTGAGGGAGGCTGAGTATTTGAAATTCATCAA
ATCGAAGAATATGGTGATGTATGGTGAAGTGTTGAGAAAATTAAAACAAC
ATCGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGAAACAAAC
ACCGCCACGGCGTTTCTTAAGAATGGTTTCAAAATTCGAGCCTCCGCCCC
ATCGCCCATTGAAATGACGTCATTCAGATTGTGCTGAACACCGCCACGGC
GTTTCTTAAGAATGGTTTCAAAATTCGAGCCTCCGCCCCATCGCCCATTG
AAATGACGTCATTCAGATTGTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:414451..418174 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1177-1263:88 |
| Aaloc | 775-1173:2073 |
| Aaloc | 1-771:3725 |
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