XLOC_043114 (mRNA) -

Overview
NameXLOC_043114
Unique NameXLOC_043114
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000602_pilon:43002..43973-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043114 ID=XLOC_043114|Name=XLOC_043114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=972bp|location=Sequence derived from alignment at sc0000602_pilon:43002..43973- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAGATTGTTTTGCTAGTGGAAGTTCAATGGAAGGAGCTTTTTTGAC TCCTCTAATGATACCAGTTAAAAACAAAACTCCTGACTTAGATTTCATGA GGGTCGAAGGTGTGCTGTCAAACGAAGACGCATCTGGTATCCTTATTGAG ACTGAATATCCAGGCTTTTATCGTATCGATGTTGGGAATCCCCAACTTAA AAAAATTCTTTATAACCCATCGAAGTTTTTTCATTTCCTTGCTGGAGATG ATACTGTGAAAGAAGCACTGAGCAAGCTTAATAAGGAGCACAAGGATGAC AAAAATCTGCCGTTTCTGGAATCTAACCATGGATGTCCATCAGCTACCGT TGGTATAAGGGATCAATTTCTTAGAGATAATGGGGGAAAGAACGCTGAAC GTTCATATTATAAAATCCTCAGTTTATTGACAGTCGATTTGGTATTCTGT CTACGTTTGAAATTCTGGCCCGATATCGCTTCAAAATGGTTTGAAAGAAA GCGATACTGGCCAGATCAACAGACCTTGTGTGAAATTCGTAAGCTTGGAT GCACCTTAGTACGGAAATGTATTGGAGAAGAATCGAAGACGTGGCGGTTA TCTTTCTCTGAAGCTGAATTTATTTTGGCAAATCAACAAAATTCTTTCCA AAAGAAAAGTTACCTTTTGGCAAAGTTGATCTTCACATTGGAAACTCATG GGCTTGTTGAGAGCGAAACTGATCGTAAATTATGTTCTTATCAATTGAAA ACTGTGTTTCTTTTCACGTTAGAAAAGACACCACCAGAGGAGTTTCAAAC GCTTGATCAAACGAATGATTATTTGAAGCTTGCATTTATGATGTTGGAAA AATTGTCACAAGCTTTAAAGAATGGCTACCTACCTTGCTATTTCGTACAA GAAATGAACTTGCTGTATGGTTTCGGTCAAAGCTTTTTAGACAGCATTGC TGATCGTTTGGATAAGATATAA

Coding sequence (CDS) from alignment at sc0000602_pilon:43002..43973-

>XLOC_043114 ID=XLOC_043114|Name=XLOC_043114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000602_pilon:43002..43973- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAGATTGTTTTGCTAGTGGAAGTTCAATGGAAGGAGCTTTTTTGAC
TCCTCTAATGATACCAGTTAAAAACAAAACTCCTGACTTAGATTTCATGA
GGGTCGAAGGTGTGCTGTCAAACGAAGACGCATCTGGTATCCTTATTGAG
ACTGAATATCCAGGCTTTTATCGTATCGATGTTGGGAATCCCCAACTTAA
AAAAATTCTTTATAACCCATCGAAGTTTTTTCATTTCCTTGCTGGAGATG
ATACTGTGAAAGAAGCACTGAGCAAGCTTAATAAGGAGCACAAGGATGAC
AAAAATCTGCCGTTTCTGGAATCTAACCATGGATGTCCATCAGCTACCGT
TGGTATAAGGGATCAATTTCTTAGAGATAATGGGGGAAAGAACGCTGAAC
GTTCATATTATAAAATCCTCAGTTTATTGACAGTCGATTTGGTATTCTGT
CTACGTTTGAAATTCTGGCCCGATATCGCTTCAAAATGGTTTGAAAGAAA
GCGATACTGGCCAGATCAACAGACCTTGTGTGAAATTCGTAAGCTTGGAT
GCACCTTAGTACGGAAATGTATTGGAGAAGAATCGAAGACGTGGCGGTTA
TCTTTCTCTGAAGCTGAATTTATTTTGGCAAATCAACAAAATTCTTTCCA
AAAGAAAAGTTACCTTTTGGCAAAGTTGATCTTCACATTGGAAACTCATG
GGCTTGTTGAGAGCGAAACTGATCGTAAATTATGTTCTTATCAATTGAAA
ACTGTGTTTCTTTTCACGTTAGAAAAGACACCACCAGAGGAGTTTCAAAC
GCTTGATCAAACGAATGATTATTTGAAGCTTGCATTTATGATGTTGGAAA
AATTGTCACAAGCTTTAAAGAATGGCTACCTACCTTGCTATTTCGTACAA
GAAATGAACTTGCTGTATGGTTTCGGTCAAAGCTTTTTAGACAGCATTGC
TGATCGTTTGGATAAGATATAAAAAAAAGATTGTTTTGCTAGTGGAAGTT
CAATGGAAGGAGCTTTTTTGACTCCTCTAATGATACCAGTTAAAAACAAA
ACTCCTGACTTAGATTTCATGAGGGTCGAAGGTGTGCTGTCAAACGAAGA
CGCATCTGGTATCCTTATTGAGACTGAATATCCAGGCTTTTATCGTATCG
ATGTTGGGAATCCCCAACTTAAAAAAATTCTTTATAACCCATCGAAGTTT
TTTCATTTCCTTGCTGGAGATGATACTGTGAAAGAAGCACTGAGCAAGCT
TAATAAGGAGCACAAGGATGACAAAAATCTGCCGTTTCTGGAATCTAACC
ATGGATGTCCATCAGCTACCGTTGGTATAAGGGATCAATTTCTTAGAGAT
AATGGGGGAAAGAACGCTGAACGTTCATATTATAAAATCCTCAGTTTATT
GACAGTCGATTTGGTATTCTGTCTACGTTTGAAATTCTGGCCCGATATCG
CTTCAAAATGGTTTGAAAGAAAGCGATACTGGCCAGATCAACAGACCTTG
TGTGAAATTCGTAAGCTTGGATGCACCTTAGTACGGAAATGTATTGGAGA
AGAATCGAAGACGTGGCGGTTATCTTTCTCTGAAGCTGAATTTATTTTGG
CAAATCAACAAAATTCTTTCCAAAAGAAAAGTTACCTTTTGGCAAAGTTG
ATCTTCACATTGGAAACTCATGGGCTTGTTGAGAGCGAAACTGATCGTAA
ATTATGTTCTTATCAATTGAAAACTGTGTTTCTTTTCACGTTAGAAAAGA
CACCACCAGAGGAGTTTCAAACGCTTGATCAAACGAATGATTATTTGAAG
CTTGCATTTATGATGTTGGAAAAATTGTCACAAGCTTTAAAGAATGGCTA
CCTACCTTGCTATTTCGTACAAGAAATGAACTTGCTGTATGGTTTCGGTC
AAAGCTTTTTAGACAGCATTGCTGATCGTTTGGATAAGATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043114XLOC_043114-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000602_pilongenomesc0000602_pilon:43002..43973 -
Properties
Property NameValue
Aaloc1-972:973