|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:396070..399903+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043107 ID=XLOC_043107|Name=XLOC_043107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3834bp|location=Sequence derived from alignment at sc0000260_pilon:396070..399903+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGAGAAATTAGATTcacattttgtttcattttgatatttttgtc
aacaatACAATCAAACCTGGATCCAAGTCACAATGTCAACACAATCAATA
CCACAAGTGAAATTCTTTATGGAGTACCTTGTCATAAAGATATTGGTAAA
TCGTCTGCCGTGAACTTCAACCATAATTCAGAACGACAAGTTTTCAAAAA
GGATAAAaagtaatttgatttttttgttactgTCCTTATCTTTgctgaaa
acatatttttgtgtttgaatgCATTCATTACATGTTAAATTATGAATTTT
GGATCCTAACCTGAAAAAATCTTCTCTGGTCACAAATATTTGACATTCAT
TGGTCTGTAATAATATTCGTTGTTTTACTATTAAGGTACACATCTTCACA
ATGGGTTATGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAA
TGCTGGTCATTGATAACAGCACCGTCATTGAAATGTTTCTTGAGTAAGCT
TACTTTACTTTATTTGATATGCCCaaaaaatagaagtaaataaaataaaa
gttaatttcaaattgttaatctaaatGAGAAGTCGCGGGaattaaattct
gcaaatttaAGGGGCTTcattagcgagcacctcaccaaaaaccagcattt
ttcactttttcagttccactttgatgattttcgagaaaaaaaatgtactt
ttcaaatattttttttgacgcAGATTCGATTTTTCCCTACTGCAAGAGCT
TCGGAAGTTTAAAATGGCGTCAAAAATCGAGTATTAGAAGCATTTGAAAA
GgccgcaaagtggaatagacgtgtTACTGCGTAGAATGCGGGAATGCgta
aatgggctttttcacttgcttgaatgcgtgaaaataaaaaaaataaaaaa
atgcgcGAATgcgaatgcgtgaattgaagatACTGTATCAACTAATGTTT
CATATAAGAAGTACGAATAAGGTCTAtccaagaaataaaaCTGTCAACAA
TTAACAATCACAGTTTGGCGGTGAAAGTCCAAATCATTTAATGCGATAGT
CATtttcttatttttcagtaAATACAGAGTCACCTCTCTGACCAACACAA
CTGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGACATC
TCAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGTTCA
ACTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCAACCaa
aaaagtaaaaaCGTTTTTCATATACTATTAACGCTCTCTGATTCGTCTTT
CAAGgcgaattggattttcatcgaataagggaggaTATTGAATAGTacag
cgtcgtttatgagagtttctcgtTGACGGTAACTTTAATCATCGAAAATA
ATGAAGTGTATTGCAAAGTAGAAcatcgaataagagagtgtcaactatca
tataacaatagcgttcagtttgaggtcgttgttgttattttctgcccgcg
tagtttgattattcgcccgaTAGTGTCTTTTAGGCCCAacgcgaagcgga
gggcgcaaatggcacaAGAAATTTCGCAAGAAATGGTACAAGAAATTTCA
GCTttgtattcttatgaaattgttcttataaaaaacgtgtatgacaaggc
acggatgtgactctaagtagactgtaaatcactcccttgtcACATTTGTT
agtatttgaaagaattttgtctcagatgagaggtcactcttaacaaaaat
tactgtagggctaagatcattccttttgaacgcaaattcaactctatgtg
ttcgttttgctgcggtggcaccttaatgaaagttatggctagtaatAGCA
CTTAATTCGtcaaaaagaaggaaaatattgaacaaaCTATTTCTTTGTGG
TGGCACTTACAGTAATTAGAAGGTGAAATTCCTtgtcttttttaattcaa
aagttcGATTCTTTGAAGTCACTGTCCAAGTTTCcgtattaatttttttt
tcagcgaGCATTTCCTTCACACAAGCCCGATCGGGTACTTCACATCATTT
TATTATCCGTTTGGATACAAATATGGCAGCCGAGTAGTgcacaaaatcaa
aacttttggaaaacACAAGATAATTCACATCCATTTTATGGACGTTCAAA
TGACACAATATGGATTTGTTTGTAGCAGCCATGATGATAATCTAAGGATT
AGAGGTTGGTTAACTAAGGTTACTATTCTAGACgtcagaatctcaaaata
tcattttcaattaTTGAAGTAAATGTAATGACTTCGTTGATCCGatcatt
tttcacaaatttttgccatCTTCGTGAAAATAAATCTCGCGAAATTGTAC
GGAGAAGTTTCTACCAAGAAACCATATTATGAGTTTTTAAGTTGGCATTA
TGCTGGAAAAAGACAAATATTTTAGCaatgaacggataataaaccattta
ctTGAACGCAGTCTCATGCAATATGAAATAAATTAGGCTTCGAACGCACG
CAGGCCAAATATTTTTGCGCATTATATTCGACCCgctccaataatttttt
attagttGCAGTATAAGCTTTTCGTCAAGTAAGGATATCTCTTGCTGAAT
TTCATCACTTGTGTAGCACTTTGTCCGACTTCAGACGTCAAAAAACAGCA
TGAATGTTATTTCCGTAGATTACGTGGGAACAGTAAGGGTGTTTTTATCA
CAGCCCAAACAAAACCAATgtgtaaaaaattgaattatgaaATCCTATCA
ATTATCAACAGGCTTTTTCGATCTTTTCTAGGAAGCGATCAACTTGATGA
GAGGTTTGAATATGCAGATACAGTCGGTTATACTTTAATGTGTCATTTCG
ATACACCATACTCGATTGAGGTCTCCGGCTACGAATATATCTTTATACAG
TTCAATGCACTGCATTCAACCATCGCGCATCGTGGGTACGCAATTGGTTA
TGAAATAAAGGATGGTATGCTTAaagcttttatattttttatttaggccg
tattgcatagaatatttttttaggttttggaTCCCGAGATCTCAAAAGAC
TTGAGTCTaatgttgaaaatcaaaattgaattttacaCCCCAGAAGTAAA
TTAaagcaattaaaaaattttaccaGGAATTTCCCTTCTATCAAATATTA
TGTCTTTGATTGTATTACGAGCTTGTAAGTACAGCTGACCCTCTCTAATT
CGTCGATACGCTCCCTCATTCGATAGAATTTAAAGCCCTAGTCATCAAGG
GTCTCTCGTAAACGatattctattattcgataagctcctttattcgatga
aaatccaattccccttgaagatcttgaaaaattcttctttctcATATTAA
AGATGTTTCAAAGACAAATCCAGAAGTCTCAAAAGCCCGTATCATAATGG
CGACCATTGTCGGTATAGTATTCGGTATGTGTTTGAGTACCGCTGTTATA
GTGATTGTATTATACCGGAAAAGAAAACGGAAAGTGCCAGAAGATCCGGA
AGAGATGTCAAAACATACGGAAGACGAGCTTAGTGGAGATAATacgaaaa
atgatgaaaattataGTTCCAATACAGGAGATGAAGACTCAAGGCAATCT
GTTGATATATGTGAAGGTGGAACTTCAAGAGATTTTGGTGCACTTAACGG
ATTGAATTTAGAACATTTACAAAGATTAAATAAATTGTTTAGTTCAACTG
TTGCAGCGGACGGTGAGGGACAAAAGGAAAGTAAAGATGAAGCAAATGAA
AAGGATAACTCATctcaaaatgatgatgaaatacGCTGTGAAAGTCAGTT
TCAGTCGAGATGGggtttttataagatgctttga Coding sequence (CDS) from alignment at sc0000260_pilon:396070..399903+ >XLOC_043107 ID=XLOC_043107|Name=XLOC_043107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000260_pilon:396070..399903+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGAGAAATTAGATTcacattttgtttcattttgatatttttgtc
aacaatACAATCAAACCTGGATCCAAGTCACAATGTCAACACAATCAATA
CCACAAGTGAAATTCTTTATGGAGTACCTTGTCATAAAGATATTGGTAAA
TCGTCTGCCGTGAACTTCAACCATAATTCAGAACGACAAGTTTTCAAAAA
GGATAAAaaATGAGGAGAGAAATTAGATTcacattttgtttcattttgat
atttttgtcaacaatACAATCAAACCTGGATCCAAGTCACAATGTCAACA
CAATCAATACCACAAGTGAAATTCTTTATGGAGTACCTTGTCATAAAGAT
ATTGGTAAATCGTCTGCCGTGAACTTCAACCATAATTCAGAACGACAAGT
TTTCAAAAAGGATAAAaaGTACACATCTTCACAATGGGTTATGCAACTTC
GTCTATCAAGCATTAACACTGTGGTCAACTCAATGCTGGTCATTGATAAC
AGCACCGTCATTGAAATGTTTCTTGAGTACACATCTTCACAATGGGTTAT
GCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGCTGGTCA
TTGATAACAGCACCGTCATTGAAATGTTTCTTGAtaAATACAGAGTCACC
TCTCTGACCAACACAACTGTAACCACAAGTAAATTGCAATCCATCTTCTC
ACACATTTATGACATCTCAATAACATGTGCATCATCAACTATCAATGAAA
TCGCTGTAAAGGTTCAACTAATTGACACCAAAATTATTGGCGTTAACCAT
AAACATATCCAACCaaaaaataAATACAGAGTCACCTCTCTGACCAACAC
AACTGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGACA
TCTCAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGTT
CAACTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCAACC
aaaaaacgaGCATTTCCTTCACACAAGCCCGATCGGGTACTTCACATCAT
TTTATTATCCGTTTGGATACAAATATGGCAGCCGAGTAGTgcacaaaatc
aaaacttttggaaaacACAAGATAATTCACATCCATTTTATGGACGTTCA
AATGACACAATATGGATTTGTTTGTAGCAGCCATGATGATAATCTAAGGA
TTAGAGcgaGCATTTCCTTCACACAAGCCCGATCGGGTACTTCACATCAT
TTTATTATCCGTTTGGATACAAATATGGCAGCCGAGTAGTgcacaaaatc
aaaacttttggaaaacACAAGATAATTCACATCCATTTTATGGACGTTCA
AATGACACAATATGGATTTGTTTGTAGCAGCCATGATGATAATCTAAGGA
TTAGAGGAAGCGATCAACTTGATGAGAGGTTTGAATATGCAGATACAGTC
GGTTATACTTTAATGTGTCATTTCGATACACCATACTCGATTGAGGTCTC
CGGCTACGAATATATCTTTATACAGTTCAATGCACTGCATTCAACCATCG
CGCATCGTGGGTACGCAATTGGTTATGAAATAAAGGATGGAAGCGATCAA
CTTGATGAGAGGTTTGAATATGCAGATACAGTCGGTTATACTTTAATGTG
TCATTTCGATACACCATACTCGATTGAGGTCTCCGGCTACGAATATATCT
TTATACAGTTCAATGCACTGCATTCAACCATCGCGCATCGTGGGTACGCA
ATTGGTTATGAAATAAAGGATGATGTTTCAAAGACAAATCCAGAAGTCTC
AAAAGCCCGTATCATAATGGCGACCATTGTCGGTATAGTATTCGGTATGT
GTTTGAGTACCGCTGTTATAGTGATTGTATTATACCGGAAAAGAAAACGG
AAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACATACGGAAGACGAGCT
TAGTGGAGATAATacgaaaaatgatgaaaattataGTTCCAATACAGGAG
ATGAAGACTCAAGGCAATCTGTTGATATATGTGAAGGTGGAACTTCAAGA
GATTTTGGTGCACTTAACGGATTGAATTTAGAACATTTACAAAGATTAAA
TAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTGAGGGACAAAAGGAAA
GTAAAGATGAAGCAAATGAAAAGGATAACTCATctcaaaatgatgatgaa
atacGCTGTGAAAGTCAGTTTCAGTCGAGATGGggtttttataagatgct
ttgaATGTTTCAAAGACAAATCCAGAAGTCTCAAAAGCCCGTATCATAAT
GGCGACCATTGTCGGTATAGTATTCGGTATGTGTTTGAGTACCGCTGTTA
TAGTGATTGTATTATACCGGAAAAGAAAACGGAAAGTGCCAGAAGATCCG
GAAGAGATGTCAAAACATACGGAAGACGAGCTTAGTGGAGATAATacgaa
aaatgatgaaaattataGTTCCAATACAGGAGATGAAGACTCAAGGCAAT
CTGTTGATATATGTGAAGGTGGAACTTCAAGAGATTTTGGTGCACTTAAC
GGATTGAATTTAGAACATTTACAAAGATTAAATAAATTGTTTAGTTCAAC
TGTTGCAGCGGACGGTGAGGGACAAAAGGAAAGTAAAGATGAAGCAAATG
AAAAGGATAACTCATctcaaaatgatgatgaaatacGCTGTGAAAGTCAG
TTTCAGTCGAGATGGggtttttataagatgctttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:396070..399903 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-1368:3355 |
| Aaloc | 706-885:2784 |
| Aaloc | 505-702:2006 |
| Aaloc | 319-501:1070 |
| Aaloc | 211-315:387 |
| Aaloc | 1-207:1 |
|
