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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000242_pilon:159003..167207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043103 ID=XLOC_043103|Name=XLOC_043103|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8205bp|location=Sequence derived from alignment at sc0000242_pilon:159003..167207+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGCAACTAAAATTATCGATGTCAATAATCCCAGTGGGGGTTCACAAAG
TGCAACAACATGTCCATGGGGGAAGATTCAAAACACCCCTCCAGCTAGTT
CATTCTCATCTTTAATGGATGAAGAATATGCGAAGGAGCTTGAAAGTGAA
GAATTGAAATCTTTAAGCCAAGAACAAGATCCAGTCCAAACAGAAACACA
AGGTCAGTGacataatttaatttttctcaacTTTTGGTCTTTTGGCCTGG
GCATGATTCTTCTTCTCGAAATAAGGTTAAAACTTTGGCAGACTGGAGAT
TTCAAATTTGCGaaattgactgaaatttggcacacttattCTTCCTTTGG
TCAATGAATACCTAGTAGCctggtgttttttttcttttttttttaatttt
tgatattttcaggCCTGGGCATGAGTTTTACGCCAAAATGAGGCTTATGT
TAGCCGTCTGGACTTTCACGGGCCAGCCAGTCAGTCAGCacgggcgacag
tttttttttctaattttaagaGTATTTAGTCTTTCTTTGACAGAattgaa
ttattgaaaattattcTTAAAGGAGAATTAATGTTTGAGATTTGGCATTC
CAtttttttGCCTGGACAGGAAGAAGATCAAAAATGGagtttaataaaaa
aagaactaattaaaaatcttgtttatttacttgattATTTAGCTTCAAAT
AAAGATTGCTCTTTTTAGGCTCTAAGAAGGAGAAAATTACACCCTCCCTA
TATTTTGTGACGTAGGTTGCAAGGATGAATAAAcataatgttttaaaaat
ctGCAGTAGTAAAAAAGGGAAGAAGCTTGAAAGGAGTTTTACATGAATGT
TATATCATTAGAATACTCGTCAGAGCTACTGTTTGTAGACGAAGAATCAC
TGGTTGCTCTCTTTcatttctctctcttttttgaAAGTCTAACAACCACT
TACGCGCATCATACGTCACAAATTTTGTTGCCATGGTTATATAAGGGAAT
TTTTATTCTATTATTCGGTATAGAAAAAGTAAACAACTATGAATTATATA
TTCTTGGAATCGTGTTAATGAGCTCTTTAAGAATATAATCataagtttca
ttgaaaatcacACATATTAATTCCTCTTTAataacattattttcaaattc
tagTTGTAATACCACCTGAAGCTGCCACTAATGGATCTGATGACACCGCT
AATGATTTGTTATTAGCACAAATGTTACAATTAGAATTTAACAAAGAAAA
TGATGCATATGTCAAATCATTAGAAAAGACTTATAATGGAACAAGTAAAG
GTTTGTGCTGTTGTTATTATTGTAGCGTCTTTAAAATCAATTCAACGTTT
GATTGCATTAGCTACatatttaaaaatctaaaaaaatttttttgctgata
tatatgaagaaaataagaatttctgtccaactatattcactcaggagatt
ggggtggcagagcagcatatgcgttttggtccttattaggactcgtcatc
ACTGCATCTGCATACTGCACACTGGCTGGCCAGATCGATTTAGCCAGCAT
CTCTAAACCACAAAACCACTTACAGAATATAGAGGATAATTTAATACGAA
ACGTATAAGTAAAAAATGAACCACTGAAGCTTCTGTCAAACgaaaatttt
gctgaaatttggaccaaatgtttcatcacacaagaaaataagaccctaaa
aatcatgaactctggtggggaagCAGATTTCTAAAccacaaaatcacttg
tggttcaaaCTAAGAGAAATACTGGACATAAGGGAAATTCCCTAcagaag
ggaaattccctacaGAATATATAGGATAATTTAATTCTCTTTGAGGACCG
AAACGTATATGTAAAAAATGGACAACttttttttGGTTAATTAAACAGTG
TCAATGTCATTCAAGAATTTCCAGTCAGTTCACCCATACGAGGCTGATTC
ATCACGTAAATTATATGGCAAAGATGATTTTGACGATGACAGTAGCGAGG
AGGACTCTGATCTCGATGATGCTATTAGTAAGTTCACTCAATTTTTTCGA
GAAACCTATCTTGGCTCCTTTAAAATTCCACTCTAGCCCCTTCAAAGATT
GAAAGTCTTCAGCTTATCACTTCCTTTTGTGTCTTGTGCAtattcctttt
gttttttattttatacttCCAAAATGTATATTGGGTTTTTATTACAGATT
GTAATGGTTAGTCGctagtttgtattttcttcagtgcataTAACTTCACT
ATATACTCTAGCCCCTTCAGagattgaaactcaatggaaCTACCTCATTT
TGTCATCTCTCATTCACAAAGCCTttaagaaatattattttggggtattt
tttctCCATCATAGATGAAAGGAAAGCAGACGGTGAAATCATTACAAAAC
ATGATCAACAAATTTCTGAAAGGAAGAATGCCAAAAATGTAGAACAGGTA
TAAAGGAAGAAGAAGTCCACATGCTTGATTATTGATAAGATATTGGGCAg
tttcattaaatttccatactaAAAGGGgtggacaaaccttttcaaggcaa
aaaaagattcttaggAATGTGTGGATGCCCaaaaaaaTACccctggaaaa
ttgcaaaatttgcagaacccttggaaaattcttttcatacctttaaAGTG
AGGATGGACGAAAAGTCTTTTAACCCATGGAAATTTTTGAATAACCATTA
TACCCtctgacaaatgaaaaaataatcccctggaaattcttctccgaTTA
CAAATTATTCGTCCACCCCTCTATGGGGTACggttataaaatggaatgac
aTATTTCAATACATAGCTCAATTAGGACAAAATCGATGTTGACAAATTTT
CGCAGTATCCTGCTAAACCATACCAGACCTATTACAGAAATAACAATGTT
ATTTTTTACTTCCTTAAGATAACATCCTCATCTATTAACCGAGTTGCAGA
CCTTGGTAGACCCTGGGCAAAttgtaaataaaatatcaaGTTTTCACAGT
TCTTTGTATTTTACAACAACAAGTTTTCTTGACGCGGCAGATTAGATTGC
TGATTTTTGTAGCATTTTTACAGcagcattgggcttttccagaaaaaaaa
attacacccactgttgattgatttttagaagtatcgaaccccctggatat
cctactttattagtaaagaccccatAGATATCAGCTCTTAAAAATAtact
caaccccctggatatcctctcttataaagatgcttacccttggatatcgt
attttttcaCTCGAAAtgcactttaccccctggatatccgctcccttgta
gatatttaaccccctggatatccacttttgaacttTATTTCCCAATTTCC
TTTGCAAAAGGGGACGtttttttACCTCCAGAACCTCCCATTCAATGaag
ttcattttctttattttgtttaagCTAATCCAccatgtcgacatccctct
tctaaatCCGACACCCTTCTTCAGAGGTAAGATaagaaggtcggaatcac
tgatagacaaaaaaTTTTCCTAACTAATCGCTAAGCAAATAAATATAATT
TCCATCAACGATTCCGGCCGTCTTATTATTCCCAACTCTTGGTGTCCaag
gtgtcggaattagaagagagATGTCGACATTAAGCCAACTTAGAGTGTTA
AGAGCGGAATTCCCAGACCAGATATTCAATGGAGTTTATTTAGTTTTCTT
TACGCATCAAGCTAACCCACTTTTATaatgattattttatttatactaGT
TTCCACTCCACTTTGCTTCTGGAGATGTTGGCAGAAAGGATATTCGCCTA
CCAAATGCTGTTTACAACCGATTGAAAACACATTCAAAAAAGGAGGAACG
GAACAACATGAGAATACATGAAAAACAAGAACATTCAACACACGtaagaa
taaaaataattatcttaaaagagaactaattttcgtatggtcgaaaaaaa
ttccattgatttttgatggaaaatggccaaaatttgtAATTCGTTGGTTC
TGATTTTTGGGGTTTTGCCGAATAAAcgcaaaagaaagcaaaaatttagT
TCCTTTTCTAAGTAGATCTTagaagaactaattttcgctaTCTAACCAGA
ACTAGTTAGATACTTTCTTTTGCGAGGCTCTTTGAAGCTTTTAGCGCGGA
CATTTCAGATATtgtgtaaaattattttaacaaaTGTGTAGCttgcttag
attgggtaatgcTGGGTGCTACGAATAGATGTGGCACTCCATCTCAACAT
TTTACCTCCCAGATCTATCGCCAATAGAAAAAGGGAAAGACTCTCTCACT
TCCGGCTCCACGATCCGACAGGTCCATGAGATGAAAATACTTACTACAgt
ggacgctctctaattcgacgttctactatattcgataagctcccgttttc
gatcaaattgaaagtcaccgtcaaatttccttaagaaactctcataaact
acgctctactattcgacatcctattattcgataagctcccgttttcgatg
aaaatttgaagtccctTGAAGGTTtttcgctctcttattcgatttctaGC
GTGTAAAAAGGCCTTTAGGACGGAgttcgaaattcaaattttcgattttt
ttgcgtttgaattataatttcgaaattcgattcctcaaaacttttcaaaa
caggcAAATATCGAAAGTTTTCTTCCGAAGAACTTAGGTTTTCAGCAAGA
ACTTAGACATTTATCCTGATTCGCGTTCAAACCAATCGAGTCTcgcttat
atttttctttctcagctctataattcgatatttACCTCGTGTTTATCGGA
TTAGGGAGACTTCCTACTATTCGACACGCTCccgtattcgatgaaaatcc
gattccccttgaaaatcgaattagggagcgtcaactgtaatttaTTTCTG
TGAATTCTGTTCTTCCGTTCTCTTTTCCAGGAAAAAGCTTTAGATGAGAA
ATCTCGTTTGATCTTGTATAAGATGGTAAACAACGGGACACTTGATAGCA
TCAGTGGTATTGTCAGTACAGGCAAAGAGGCTGTTGTTATACACGCTAGA
GGAGGACAGTAAGTACTCTCTCTAAATAGAATGGATTTTTAGGTTCGTTT
AaaagccggtctccacttgcgcgcgcttcgatcacGTTTTATCTGGCAAA
GCTTCcatgctattggtcaaaagaaaaatgaagcaattccattggcgtga
tctgacgtaacggttgaaaaaagttgaaatgtattgaactttttttttca
agcgcgagcttcatttttatgacgtaatcttttttccaagcaaaattgAT
TGAAGCCAAacagtgcgatcgcagcgcgtgTGTGGATACCGGCTTTAAGT
GACATTATTTTGAGTCATAAtcattgtttaaatttttcaaaagatccACA
ATACCAAAAATTGATCATGAGACGCTCTATAATTTGAATTGTGTCGTTCA
TGAGAGTTTCTAGTTGGCGATGGCTTtgaatattatcgaataattgaGCG
TTTCGAAATAATAAAACTTGGATATTGAGAGCATCAATATAAGACGATAT
AATATAAGACAATCTTTTCTACTGTTTTCTTGTTCATCTTTCAACAGGTC
TGAAAATGGTCCACTTCCATCAGAGTGTGctttgaagattttcaaaacGA
CATTGAACGAATTCAAAACTAGAGAGAAATATATCAAGGATGATCACAGG
TTTCGTGACCGCTACTCTAAACAAAACCCAAGGAAGATTATCAAATTGTG
GGCTGAAAAGGAGTTCAGAAATCTCAACAGGTATGTTCCATGTTAgcctg
tacacgttttttagaacaaactttataaaaatatgAGGCTTCACAACAAG
TTTTAAGGCTTTTTAGGTTCTAAAACACCTTTTTTATTAGGAAAATAGac
gaaaatactcaaaatttgctgaaaataagaacatgttaaaaacattttta
agcttgaaatccgaaaagttaagaacatttaaaattcTGAAGGTTGGTGT
TATTTTTCAACGGAGAAGAGTTTgttagtttcatttttcattgagGATTC
ATTTGAATGGACTTGAAAAGTTTGTTACAGGcaagtttaaagtgttattt
ttACTGTGTGGGATTCATTCGAATTCAAATTGGTCTCaaccttttcattt
tcatctgaACTGCTCCACTCTTTCGCCCCAAAACATCGATTGTTCACAGT
TTTAAACGGAAAATGTTATATGGTTAAAAAACTATCATCACTCGTCAATG
TTTCAGATATTATTATAGAGATTGAATGAAGTAACATGAAAAAATTTCCC
TATAGCACTTTGCTTTTTGCAATGGAGCATTAAATATGTTCCCTCTGTAG
TTATCTTCTTATTAGCTACCAATACCGTTTGAAAACCAGAAGATCCTCCG
AGCTTTGAATTCACAACCATACCATTGGGGAGAAATATCTTTATCCGTTG
CGAATCAAAATCATAttctcgatttttttcttccgtTAATTTTCAATGGT
TCAGGTGACTAGTCTCAACACCAGTGTGTTTATatttgtacatttttatt
ttgtatcatactTGTAGAATGCAGGAAGCCGGTATCCCATGTCCAAAAGT
TGTTTGCTTACGTAAGCATATTCTTGTAATGACTTTTGTTGGAGCAGACC
AAAAACCGGCACCAAAATTAAAAGATGCAATATTATCGAGAAGGGAATTA
GAATCAGCTTACAGTCAGTGTACAGAAGTAAGAATTTCTTGGCTTGATCT
CATTTACACGTTAACAACCAAAGAAGTGATCTTAAAGGCCATGAGACGCC
CTGGATAACTTTGAAACATTGGCATCGCGTCTTGTTATCCTTAACTCATA
TTTTTATACATTGTATCACTACGATCTCGATTTCTTCTTCTTATAGTATA
GGAAATACtttttttCCCATCATATAAATCGGCTTTCCCaaaataaaata
gggctcttccgtctaaaaacaaaatgttaaaaaaccattaaacaaatgaa
aagttcaaataataagttaaattttagaattatgaaaaatttaatttcct
aGGAGACATTGATAGATCAGGGGCTGAAGTACAGCTTGCTCTCgcttacc
ttatcggccaaaacttagtcggccctaagtgactaaattttggcttggtg
actaaaattagggctgaCCTGGgctgactaaaaatttgggccgactaaaa
tttagACCGactaaaaaattagaaatggccaaaatttaGTTATTAGttgg
cccttagtgactaaattttgacgaggtgactaaaatattagggccgacta
ataattaaggccgactaaaattaaagccgactaaaattaaggtcgactca
gttttggccgataaggtatccgAACTCAAACGGTaaaaaaaTATTCCATT
CCTTTTACAGATGATGAAGACGATGTATAACGAATGCAAGCTGATTCATT
CTGATCTCAGCGAATACAACATTCTATGGCATTAcaataaatgttttttc
attgatGTTTCACAATCTATAGAACCTGTCCATCCACAAGCATTTCATTT
CCTACTTCGAGATTGTCACAATATAACCAGTTTCTTCACCAAAGCTGGAT
TGACCACAGATATTGTGATGAAGGAAGAAGAATTGTTTAAATATGTTTGT
GGCAAAGAATTGGGCGAAACTTGTCTTGATCAAATTGAAAACGAGGTAAA
TACTTTTTAAGTCTTTTTTAATAAGATCAAACCATATAAGAtcaaaccat
ataagaacataaggcttcgatgatggccaaagtattaagaacaagttgag
aacatttaaaGGTTAACCTTGAAATTCAGAAAGTTAGGAACATTGAGAgg
tttcaaaatttaagaatgTATATAATATTAGTGTGATTTGGTTGCCCAAT
TCCAGGGCATaatctttaattttcaaatgttgacTTTACTTGTGACATTA
TACCTTAGCCAACAATATTATCACTCTTTCACTTTCTCCTCGCagcaaaa
accaaatttcgagcGGGACGAAGAAATGCTAGCGTTTGGTTTGAACTCTG
ATGCTAATTTCGATTATCAATTCaaattcaaccaatcaaaactcGATCAA
GCAAAACATAACCAATCAGAAGAGAGTACGGCCGACCAATCAGCTGACAG
TAAAGTGAATGAACTAGCAGATATGTCAGAATCAATATCTACGAGTGAAA
ATTAA Coding sequence (CDS) from alignment at sc0000242_pilon:159003..167207+ >XLOC_043103 ID=XLOC_043103|Name=XLOC_043103|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3342bp|location=Sequence derived from alignment at sc0000242_pilon:159003..167207+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGCAACTAAAATTATCGATGTCAATAATCCCAGTGGGGGTTCACAAAG TGCAACAACATGTCCATGGGGGAAGATTCAAAACACCCCTCCAGCTAGTT CATTCTCATCTTTAATGGATGAAGAATATGCGAAGGAGCTTGAAAGTGAA GAATTGAAATCTTTAAGCCAAGAACAAGATCCAGTCCAAACAGAAACACA AGATGGCAACTAAAATTATCGATGTCAATAATCCCAGTGGGGGTTCACAA AGTGCAACAACATGTCCATGGGGGAAGATTCAAAACACCCCTCCAGCTAG TTCATTCTCATCTTTAATGGATGAAGAATATGCGAAGGAGCTTGAAAGTG AAGAATTGAAATCTTTAAGCCAAGAACAAGATCCAGTCCAAACAGAAACA CAAGTTGTAATACCACCTGAAGCTGCCACTAATGGATCTGATGACACCGC TAATGATTTGTTATTAGCACAAATGTTACAATTAGAATTTAACAAAGAAA ATGATGCATATGTCAAATCATTAGAAAAGACTTATAATGGAACAAGTAAA GTTGTAATACCACCTGAAGCTGCCACTAATGGATCTGATGACACCGCTAA TGATTTGTTATTAGCACAAATGTTACAATTAGAATTTAACAAAGAAAATG ATGCATATGTCAAATCATTAGAAAAGACTTATAATGGAACAAGTAAAGTG TCAATGTCATTCAAGAATTTCCAGTCAGTTCACCCATACGAGGCTGATTC ATCACGTAAATTATATGGCAAAGATGATTTTGACGATGACAGTAGCGAGG AGGACTCTGATCTCGATGATGCTATTATGTCAATGTCATTCAAGAATTTC CAGTCAGTTCACCCATACGAGGCTGATTCATCACGTAAATTATATGGCAA AGATGATTTTGACGATGACAGTAGCGAGGAGGACTCTGATCTCGATGATG CTATTAATGAAAGGAAAGCAGACGGTGAAATCATTACAAAACATGATCAA CAAATTTCTGAAAGGAAGAATGCCAAAAATGTAGAACAGATGAAAGGAAA GCAGACGGTGAAATCATTACAAAACATGATCAACAAATTTCTGAAAGGAA GAATGCCAAAAATGTAGAACAGTTTCCACTCCACTTTGCTTCTGGAGATG TTGGCAGAAAGGATATTCGCCTACCAAATGCTGTTTACAACCGATTGAAA ACACATTCAAAAAAGGAGGAACGGAACAACATGAGAATACATGAAAAACA AGAACATTCAACACACTTTCCACTCCACTTTGCTTCTGGAGATGTTGGCA GAAAGGATATTCGCCTACCAAATGCTGTTTACAACCGATTGAAAACACAT TCAAAAAAGGAGGAACGGAACAACATGAGAATACATGAAAAACAAGAACA TTCAACACACGAAAAAGCTTTAGATGAGAAATCTCGTTTGATCTTGTATA AGATGGTAAACAACGGGACACTTGATAGCATCAGTGGTATTGTCAGTACA GGCAAAGAGGCTGTTGTTATACACGCTAGAGGAGGACAGAAAAAGCTTTA GATGAGAAATCTCGTTTGATCTTGTATAAGATGGTAAACAACGGGACACT TGATAGCATCAGTGGTATTGTCAGTACAGGCAAAGAGGCTGTTGTTATAC ACGCTAGAGGAGGACAGTCTGAAAATGGTCCACTTCCATCAGAGTGTGct ttgaagattttcaaaacGACATTGAACGAATTCAAAACTAGAGAGAAATA TATCAAGGATGATCACAGGTTTCGTGACCGCTACTCTAAACAAAACCCAA GGAAGATTATCAAATTGTGGGCTGAAAAGGAGTTCAGAAATCTCAACAGG TCTGAAAATGGTCCACTTCCATCAGAGTGTGctttgaagattttcaaaac GACATTGAACGAATTCAAAACTAGAGAGAAATATATCAAGGATGATCACA GGTTTCGTGACCGCTACTCTAAACAAAACCCAAGGAAGATTATCAAATTG TGGGCTGAAAAGGAGTTCAGAAATCTCAACAGAATGCAGGAAGCCGGTAT CCCATGTCCAAAAGTTGTTTGCTTACGTAAGCATATTCTTGTAATGACTT TTGTTGGAGCAGACCAAAAACCGGCACCAAAATTAAAAGATGCAATATTA TCGAGAAGGGAATTAGAATCAGCTTACAGTCAGTGTACAGAAAATGCAGG AAGCCGGTATCCCATGTCCAAAAGTTGTTTGCTTACGTAAGCATATTCTT GTAATGACTTTTGTTGGAGCAGACCAAAAACCGGCACCAAAATTAAAAGA TGCAATATTATCGAGAAGGGAATTAGAATCAGCTTACAGTCAGTGTACAG AAATGATGAAGACGATGTATAACGAATGCAAGCTGATTCATTCTGATCTC AGCGAATACAACATTCTATGGCATTAcaataaatgttttttcattgatGT TTCACAATCTATAGAACCTGTCCATCCACAAGCATTTCATTTCCTACTTC GAGATTGTCACAATATAACCAGTTTCTTCACCAAAGCTGGATTGACCACA GATATTGTGATGAAGGAAGAAGAATTGTTTAAATATGTTTGTGGCAAAGA ATTGGGCGAAACTTGTCTTGATCAAATTGAAAACGAGATGATGAAGACGA TGTATAACGAATGCAAGCTGATTCATTCTGATCTCAGCGAATACAACATT CTATGGCATTAcaataaatgttttttcattgatGTTTCACAATCTATAGA ACCTGTCCATCCACAAGCATTTCATTTCCTACTTCGAGATTGTCACAATA TAACCAGTTTCTTCACCAAAGCTGGATTGACCACAGATATTGTGATGAAG GAAGAAGAATTGTTTAAATATGTTTGTGGCAAAGAATTGGGCGAAACTTG TCTTGATCAAATTGAAAACGAGcaaaaaccaaatttcgagcGGGACGAAG AAATGCTAGCGTTTGGTTTGAACTCTGATGCTAATTTCGATTATCAATTC aaattcaaccaatcaaaactcGATCAAGCAAAACATAACCAATCAGAAGA GAGTACGGCCGACCAATCAGCTGACAGTAAAGTGAATGAACTAGCAGATA TGTCAGAATCAATATCTACGAGTGAAAATTAAcaaaaaccaaatttcgag cGGGACGAAGAAATGCTAGCGTTTGGTTTGAACTCTGATGCTAATTTCGA TTATCAATTCaaattcaaccaatcaaaactcGATCAAGCAAAACATAACC AATCAGAAGAGAGTACGGCCGACCAATCAGCTGACAGTAAAGTGAATGAA CTAGCAGATATGTCAGAATCAATATCTACGAGTGAAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000242_pilon | genome | sc0000242_pilon:159003..167207 + |
Properties
| Property Name | Value |
| Aaloc | 1462-1671:7996 |
| Aaloc | 1177-1461:7411 |
| Aaloc | 1018-1176:6569 |
| Aaloc | 835-1014:5599 |
| Aaloc | 706-831:4931 |
| Aaloc | 562-705:3750 |
| Aaloc | 481-561:2367 |
| Aaloc | 352-477:1901 |
| Aaloc | 205-348:1156 |
| Aaloc | 1-201:1 |
|