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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:423042..427776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043091 ID=XLOC_043091|Name=XLOC_043091|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4735bp|location=Sequence derived from alignment at sc0000088_pilon:423042..427776+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGTCCATTATTGACACCTCAGCATGTGGGTTCATGAAGGCTGT
TGTTTATCAGTTAAATTGTGACAAtgcaaagaacatttttagtgcGTTGA
GCAATGTTGAAACTTCGAAACAACTTCGAactgaattcgaaatttttgta
aacttaTTTGGATGTTGTGAATTGTCAAAAGTTGACTATGAGTGGTATAG
ACggaattatagaaagataaAGAAAGTGATGTTAGATTTGGGAAAGGGTT
cgcatgaaaagaaaaagaaagttttggatTTGTTGGGAAAGGATGCTTGG
ATGGAGTTAAGTGACAAGAAGAAGGTTAAGCACAGGCTATTCGATTGTCG
GGAGTGTATGAAAAACCATGCGGATGGTATGCGTCTTTTTCCGATGAACA
AGATGGATTTAAAGGggcaaaaaagaagaaagaaatcgGGTTTGTGTAAT
GAAAAGGAGGAAGTGGTTGAGAAAGTTGCTCAGGAGAAGATTAAAGAGTT
GGATAGAGAATTTATGGAAAGATTTAATCGGAGTTTTAAGCAAGCGGCTG
GAATTGAAGGAAAAAGACAGATAGACGAGAAGGAAAGAAGAGCATATAAC
GCAGCAAAGAAAGATATAGAGAGAGCATGGAAGAAAACATCGGTTTTGAG
GTTTGATctgtgattttcaaaaaatgcttcTTAATAACAATATATTCAGA
TACATTAGGATCCTAAAAGGGAGGGAAAGTTTAAGCAAGTAATATTTATG
TTTGGCGTTCACTTTTATCGGTCGAAAAATTAGCCAAGCATGACAATCTA
GACTCATTTCTTCTTTGAATTGAAGTCACatttacttttaaactcttata
ttctagattttaattttctttgaatctttttcttttcagaacacTGGGGG
GAACAACATCGAAAGCATCCGCATCCAGAGTGAGGTCAACCAAAGGATTC
GAAAGCTACCAAGAAGCATTGAGCAGATCGAATTTAGAAAAGGAGGAAAT
AACAGCTGGAAGAAAGAGAGCACGTACTCATGTTGGTAACAATTACACAT
GGAGGGGTGAAGAATGTTTAGAGAAGGTATTCAATTAAATATCACATTTA
TCAAAACTGAGCAATCTTCTGCagttgatttaaattttttacagcCCTAT
AATTGGATATTTACCTTGTTTTTATCAAACTAGGGAGACCTCCTTCTATT
CTATACGCTCACGtattcgataaaaatccatATCCCCTTAAAAAATAGAG
AGCGTCATTAttaatataatattattttcaaggtTCAGGGATTGCCATTT
GGTTCCGCGATCAACTTCAGCAGGCTGGCAAGGCAATACGATCTGAAGAA
TGCAAAAGGTGACCGTACATTCACTAATATTATATCAAAgaacttcgagc
cgccatgacagttgtcctttgcgaaCAAAGCTAGATCCTCGATTGTTTTC
TTAAACAATTAGGAAAGACAAagcttcgctctccaccgttttatacgTTG
TCTATCCAGTGTCTATATTATAAACTCATGGTCAAAGCAATTATTTCCCA
AATTAATATCGTCCGTTTCTTCCAAACTCTACTCTGATCATTTTTCCCGT
ATACCGCCAATACGACTGTGAAATTTTGCGTATCTATATTTTCCCGCTTC
TACTATCCTTGTAATgaacgataacatcgtctagagGTATACATGAAGTT
TTCATtcgaattcaaaaatcaaaatttatttcattctttttttatattta
ctttAGGCGAACGTCCTGGAAACGCTGGACAGGTTGTTAGGACATTTTTG
GAAGCTAACAATGTTGACATGTCAAACTTTGTTATTTTTGGCAACAGTAC
ACGTCGGATTAGAAAACGCAAGCTCAGGTATTTAATCTAAAGCTATGTCT
AGGCCCTTATATCATGTTATTTATTCTGTGAGaaataaaatagatttgta
aTCCCTATAATTATTTGAatttatatctttcaactttttaactGTTCAGG
ATTTTGGACTCCAACGTTACTGTTCCTGTTGAAGAAAGCACGCTGGAACT
GAAGGCAAACCTGAAAGCGCTAATTAAAGAGGTGATATTACGATCTAACT
TTATATACTATTGACTGTTTccttaatttaatttaaatgtCCCCTAATAC
CACAAATCCATCCCTGGACGTGGTAATTCCCCGTTCTATCTGAACAAAAT
ATCGTTGACTCCCTATGAATGGTTTTTATAGAAGGATTCGTTCCATAGAA
TTGTCGATATTGGAAATATCCCGAGAAATCACAAGCAAAATTATATATTG
AAGCAAGGGTACTTATCGATGAATGGTATGATTGCATTCCGATAATTATT
TATTTCAAAGGGTCGTTATTCGGTTGGAACACTTGTGGTACCGCAGGAAT
ACGAATACATTTCGATCAACGTATTGCCGGATGGTAGAAAGAAAAGGGAG
AAAAAAACATTCGTTGTGTCAGGTAATTTTCAATATCCAGAGGTTTTAAC
TGAAAttggaattgaaatattttgaggaCATCTTCGTAAtttttttGAGA
TGGTCGATAAATGGGCGTCCTCATCATCTGTTGATTTTGctaatttcaaa
taatttttacaaTGGAGTTTCATGTTTCCACACTTGGACTTAAAAAGACC
GCTCCTCCGCTCCTATTAATTTTTGGGCCAATGTAATTGATGTAGCAAAT
TCAATTATAAGACAAGTGGCcttacgtaatcttttatacctAACCCATAA
CAGGTAGGAAGTTCAAAACGGAGGAAGTACGCAACCGGATGCTCCGCTTT
CAAATGCCGTACCTCAGACTCAAACCCGACGATTTTTACGAGAACATGGA
TGTCGAAACTTTGACTCGCGAGCTGGCCAGGATTGGAGAAAAGGGCAAAT
CCACAGTCGACTTGAAGGCCTTTCAACGTCAGAGGACCCTTGCATGTTGG
CACGATACATCTGGCATTTGTAATTCATCGCATTTGCATATAATGTTTTG
CACAATCTACGACCGTGCTATATTCTTATCGCAGCAAGAATATTTCGAAA
AAACAGGTAATAACCCTTGATTATCATTATACCTTAGAATTCATATTTAT
CGGCGTGTGCTACTCAGCACcgcgaaatatatttttgaaaaaaaaagttt
attgtttcatttttgtttcttgtcaAACAATGTAACCTTTTAAGACGTTA
TCAATCACTGATTTACAAGGTTTTCTCCTCATTAATtcggcaaaaataaa
aatcattagTCATAGATTAGATTGAGAATTGTTTTCGAGATAAAATTCGA
GATAAAATTTCGCTGAATTGGTTGCCATCTGGAATATTAAATGTTAGAAT
CCCCGCAAATTTAATcgtattgaagaaaaaattccagAACATTTGATTGA
TTTAGTTATTGATTTAACTTTCGTATCGTCAAAATTTGAGTTGTCGAATT
TGTAAAATATCGGCTTTATCTTTACGGGAGTTTGCACGACGGGCTTAAGT
ATGGGATGTTAGTATAAATTGCTTTTCATTAGTCTTAAATCTTGTCGCCT
TCGAAAATATTCCCCTTCCTTTTAATTATATGCCTTTTGCAGTAAATCCG
AGTGATAGAAGCCCTATTTTTCGGGATTCCATAAAGGGGACTGAAAGCCG
AATGAGTTAcgattttgatatttctctgCGCAATCtataaatatttctta
taaGCAGCTCCCATTTTCGGATCAGGGATGGGATGGcttgttttctgaaa
atttttcaatagacgatatcggcttaacgaaattctccccgaatgattac
ccatgatgcattgcgcaaaaaaattcagtaagtcaatatagtCCGTGAAT
tcttttgcgcaatgcatcatgggcaatcattcggggagaattcgttaagc
cgatatcgtctattagaaATGCACCCTTGATATTTTGTACCCTATTTGTG
CTTATCGGGTCGAGGGATATCGGTGGCCGTGCTTTGATAATCTAAAGTAA
AAAGCTTTTTCTTTCATGAGACTACAATCCCCACTGAAATATATTAGCAC
TTTTTGgtatttcaacgtttttttttaatttaaacctTCGGGAGGCTTCC
AGGCCTTCGctttaaaggaaaattttaagctTCCAGATCTAATTCTTAAT
tcatgttaaataaaatcatttgCGGTAATTTTAAGGGAATTCCCCTTTGT
GTCAAATATTACGGTATTCACTACCGTGAATTATCGGCCATATCCAGCCA
CTGTCGCATGGTTTCTTTTtctgtttcatgggacaaaaagttagggaaat
acccaaaaagaCACGCTCCCTGCtggaaaaaacttctcgtgtccccaagc
cttaaagaAACTATTCCAAgggtttttttgcaaattttgcacCCACATAT
TTCGAAGAATAGAATATTTTTGCCtcgaaaaggttcgtccactgTACGGC
AAGTTaatggaaaagcccatttcgaTACAGCCAATAATAGCGTGATTACT
CCGTAATAAACATGTCAATCAATTATTTATAGGGTTAAAGGTGAACGTTC
AGTCAGAAGTCGAAAAGCCAGTTACATATCTTTTATCCAGATGCCCGTCT
AGTAATTTACAACTATGCTACAGCAATCTGAGACTAGAAGATCTGGTGGC
ATGGAACAACAGCGAATTGTCTGTTTCGAAAGATATGAAAATCGTTGATA
GAGTGCGCTTTTTTAAGGGTAATGAATGTCGATAG Coding sequence (CDS) from alignment at sc0000088_pilon:423042..427776+ >XLOC_043091 ID=XLOC_043091|Name=XLOC_043091|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3468bp|location=Sequence derived from alignment at sc0000088_pilon:423042..427776+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGGTCCATTATTGACACCTCAGCATGTGGGTTCATGAAGGCTGT
TGTTTATCAGTTAAATTGTGACAAtgcaaagaacatttttagtgcGTTGA
GCAATGTTGAAACTTCGAAACAACTTCGAactgaattcgaaatttttgta
aacttaTTTGGATGTTGTGAATTGTCAAAAGTTGACTATGAGTGGTATAG
ACggaattatagaaagataaAGAAAGTGATGTTAGATTTGGGAAAGGGTT
cgcatgaaaagaaaaagaaagttttggatTTGTTGGGAAAGGATGCTTGG
ATGGAGTTAAGTGACAAGAAGAAGGTTAAGCACAGGCTATTCGATTGTCG
GGAGTGTATGAAAAACCATGCGGATGGTATGCGTCTTTTTCCGATGAACA
AGATGGATTTAAAGGggcaaaaaagaagaaagaaatcgGGTTTGTGTAAT
GAAAAGGAGGAAGTGGTTGAGAAAGTTGCTCAGGAGAAGATTAAAGAGTT
GGATAGAGAATTTATGGAAAGATTTAATCGGAGTTTTAAGCAAGCGGCTG
GAATTGAAGGAAAAAGACAGATAGACGAGAAGGAAAGAAGAGCATATAAC
GCAGCAAAGAAAGATATAGAGAGAGCATGGAAGAAAACATCGGTTTTGAG
ATGTCTCGGTCCATTATTGACACCTCAGCATGTGGGTTCATGAAGGCTGT
TGTTTATCAGTTAAATTGTGACAAtgcaaagaacatttttagtgcGTTGA
GCAATGTTGAAACTTCGAAACAACTTCGAactgaattcgaaatttttgta
aacttaTTTGGATGTTGTGAATTGTCAAAAGTTGACTATGAGTGGTATAG
ACggaattatagaaagataaAGAAAGTGATGTTAGATTTGGGAAAGGGTT
cgcatgaaaagaaaaagaaagttttggatTTGTTGGGAAAGGATGCTTGG
ATGGAGTTAAGTGACAAGAAGAAGGTTAAGCACAGGCTATTCGATTGTCG
GGAGTGTATGAAAAACCATGCGGATGGTATGCGTCTTTTTCCGATGAACA
AGATGGATTTAAAGGggcaaaaaagaagaaagaaatcgGGTTTGTGTAAT
GAAAAGGAGGAAGTGGTTGAGAAAGTTGCTCAGGAGAAGATTAAAGAGTT
GGATAGAGAATTTATGGAAAGATTTAATCGGAGTTTTAAGCAAGCGGCTG
GAATTGAAGGAAAAAGACAGATAGACGAGAAGGAAAGAAGAGCATATAAC
GCAGCAAAGAAAGATATAGAGAGAGCATGGAAGAAAACATCGGTTTTGAG
aacacTGGGGGGAACAACATCGAAAGCATCCGCATCCAGAGTGAGGTCAA
CCAAAGGATTCGAAAGCTACCAAGAAGCATTGAGCAGATCGAATTTAGAA
AAGGAGGAAATAACAGCTGGAAGAAAGAGAGCACGTACTCATGTTGGTAA
CAATTACACATGGAGGGGTGAAGAATGTTTAGAGAAGaacacTGGGGGGA
ACAACATCGAAAGCATCCGCATCCAGAGTGAGGTCAACCAAAGGATTCGA
AAGCTACCAAGAAGCATTGAGCAGATCGAATTTAGAAAAGGAGGAAATAA
CAGCTGGAAGAAAGAGAGCACGTACTCATGTTGGTAACAATTACACATGG
AGGGGTGAAGAATGTTTAGAGAAGgtTCAGGGATTGCCATTTGGTTCCGC
GATCAACTTCAGCAGGCTGGCAAGGCAATACGATCTGAAGAATGCAAAAG
gtTCAGGGATTGCCATTTGGTTCCGCGATCAACTTCAGCAGGCTGGCAAG
GCAATACGATCTGAAGAATGCAAAAGGCGAACGTCCTGGAAACGCTGGAC
AGGTTGTTAGGACATTTTTGGAAGCTAACAATGTTGACATGTCAAACTTT
GTTATTTTTGGCAACAGTACACGTCGGATTAGAAAACGCAAGCTCAGGCG
AACGTCCTGGAAACGCTGGACAGGTTGTTAGGACATTTTTGGAAGCTAAC
AATGTTGACATGTCAAACTTTGTTATTTTTGGCAACAGTACACGTCGGAT
TAGAAAACGCAAGCTCAGGATTTTGGACTCCAACGTTACTGTTCCTGTTG
AAGAAAGCACGCTGGAACTGAAGGCAAACCTGAAAGCGCTAATTAAAGAG
GATTTTGGACTCCAACGTTACTGTTCCTGTTGAAGAAAGCACGCTGGAAC
TGAAGGCAAACCTGAAAGCGCTAATTAAAGAGGGTCGTTATTCGGTTGGA
ACACTTGTGGTACCGCAGGAATACGAATACATTTCGATCAACGTATTGCC
GGATGGTAGAAAGAAAAGGGAGAAAAAAACATTCGTTGTGTCAGGGTCGT
TATTCGGTTGGAACACTTGTGGTACCGCAGGAATACGAATACATTTCGAT
CAACGTATTGCCGGATGGTAGAAAGAAAAGGGAGAAAAAAACATTCGTTG
TGTCAGGTAGGAAGTTCAAAACGGAGGAAGTACGCAACCGGATGCTCCGC
TTTCAAATGCCGTACCTCAGACTCAAACCCGACGATTTTTACGAGAACAT
GGATGTCGAAACTTTGACTCGCGAGCTGGCCAGGATTGGAGAAAAGGGCA
AATCCACAGTCGACTTGAAGGCCTTTCAACGTCAGAGGACCCTTGCATGT
TGGCACGATACATCTGGCATTTGTAATTCATCGCATTTGCATATAATGTT
TTGCACAATCTACGACCGTGCTATATTCTTATCGCAGCAAGAATATTTCG
AAAAAACAGGTAGGAAGTTCAAAACGGAGGAAGTACGCAACCGGATGCTC
CGCTTTCAAATGCCGTACCTCAGACTCAAACCCGACGATTTTTACGAGAA
CATGGATGTCGAAACTTTGACTCGCGAGCTGGCCAGGATTGGAGAAAAGG
GCAAATCCACAGTCGACTTGAAGGCCTTTCAACGTCAGAGGACCCTTGCA
TGTTGGCACGATACATCTGGCATTTGTAATTCATCGCATTTGCATATAAT
GTTTTGCACAATCTACGACCGTGCTATATTCTTATCGCAGCAAGAATATT
TCGAAAAAACAGGGTTAAAGGTGAACGTTCAGTCAGAAGTCGAAAAGCCA
GTTACATATCTTTTATCCAGATGCCCGTCTAGTAATTTACAACTATGCTA
CAGCAATCTGAGACTAGAAGATCTGGTGGCATGGAACAACAGCGAATTGT
CTGTTTCGAAAGATATGAAAATCGTTGATAGAGTGCGCTTTTTTAAGGGT
AATGAATGTCGATAGGGTTAAAGGTGAACGTTCAGTCAGAAGTCGAAAAG
CCAGTTACATATCTTTTATCCAGATGCCCGTCTAGTAATTTACAACTATG
CTACAGCAATCTGAGACTAGAAGATCTGGTGGCATGGAACAACAGCGAAT
TGTCTGTTTCGAAAGATATGAAAATCGTTGATAGAGTGCGCTTTTTTAAG
GGTAATGAATGTCGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:423042..427776 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1534-1734:4535 |
| Aaloc | 1231-1530:2756 |
| Aaloc | 1117-1227:2361 |
| Aaloc | 1036-1116:2001 |
| Aaloc | 916-1032:1759 |
| Aaloc | 838-912:1283 |
| Aaloc | 652-837:891 |
| Aaloc | 1-648:1 |
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