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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000172_pilon:62610..65843+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043059 ID=XLOC_043059|Name=XLOC_043059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3234bp|location=Sequence derived from alignment at sc0000172_pilon:62610..65843+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAAATGAAGCTTTTCCGGATATTTACAGGAGTAGCGTTCAAGGTGGT
TAATAACAGCAAAATTAGTATTTCTGATATGGAGAAAAGGCAAACCGAAA
GATTTCGTAATGGAACTTATGGAAATGGCACAAGGACTGTTGTTCAAGTT
TCATTCAGTGATTTATTCAAAGATAAAGCTGCACTTAAAGGTATctattg
tttttctcttttttaatggATGCACTAAATGGGGATTGGATTTCagcttc
atttttaaggaagaaagaaattcattaaaaaaaaatatttcctgaaAGAG
GAGGTCTGCGTTTCAGACTAggtgtattacaaagtgtggcagttattaca
aagtgtggcaggtattacaaaatgtggtagttattacaaagtgtggcagg
tattacaaagtgtggcaggtattacaaaGTgtggcaggtattacaaagtg
tggaTTACAAAGTGTTGGAAAAAGTGtggcaggtattacaaagtgtggca
ggtattacaaagtgtggcaggtattacaaagtgtggcaggtattacaaag
tgtggcaggtattacaaagtgtggtaTAAAGTGTGGCAGGTTATTAATTA
ACAAAGTGTGGCAGGTATGACAAGTGTGGCAGGTTTAGACAAAGTGTGGC
AGGTATTACAAGTGTACAAGTGTGGCAGTTATTAAAAGTGTGGTACAATT
GTGgtaggtattacaaagtgtggcaggtattacaaagtgtggcagttatt
acaaagtgtggtacaaaggtattacaaagtgtgcaGTATTACAAAGGTGT
GGCAAGTTACAAAGGTATATACAAAGTGtggcaggtattacaaagtgtgg
caggtattacaaagtgtggcagGTATTACAAGGTGtggcaggtattacaa
agtgtggtaggtattacaaagtgtggtGTTATTACAGTGTAGTTTACAAA
GTGGCAGTATTAAATGTGgaaggtattacaaagtgtggcaggtattacaa
agtgtggcagGTAGGTATTATTAAAGTGTGGCAggtattacaaagtgtgg
caggtattacaaagtgtggcagttattacaaagtgtggtagttattacaa
agtgtggcagttattacaaagtgtggcagTTATCACAAAGTGTGGtagtt
attacaaagtgtggcaggtattacaaagtgtggcagTTATTACAAAGTTG
TGGTAGGTAATTACCTTATTACAATGGTGGCAGGTATTACAAGGGGCAGT
TTTACAATTGTGGCAAGTTTATCAAATTGTGGCAGTTATTACAAAGTGTT
GGCAGGTATTCAAAAGGTATTACAAAGTTGGCAGGTTATTCAAAGTGTGG
CAGGTATTACAAATGTGGTATTACAAGGGTATTACAAGTGTGGTAGTTAG
TTACAACAGTGTGGCAGGTTATTACAAACAAAGTGTGGGTTATTACAAAG
TGCAGTACAAAGTGTGGCAGTGGGTATTACAAAAAGGGTGGCAGGTATTA
CAAAAAGTTGgtaggtattacaaagtgtggcaggtattacaaagtgtggt
aggtattacaaagtgtggcaggtattacaaagtgtggtaggtattacaaa
gtgtggcagGTATTACAAGGTGtggcaggtattacaaagtgtggcagGTA
TTACAAGGtggcaggtattacaaagtgtggcaggtattacaaagtgtggc
agttattacaaagtgtggcaggtattacaaagttGGTAAAGTGTGTACAG
GTATACAAGGTGTGGCAGGTATTACAAAGGTGTGGGCGGTATTACAAAGG
TGGTAGTGTGgattattacaaagtgtggcaggttattacaaagtgtggca
gGTATTACAAAAGGTACGCCAAGGGATTACAAAGTGGCacaggtattaca
aagtgtggcagGTATTACAAATGGTGGCAAAGTTAGTTACAAGTGTGGCA
GTTATTACAAAGTGTACAAAGTGGcagttattacaaagtgtggcaggtat
tacaaagtgcgccaggtattacaaagtgtgaatgttttattaatttcttt
CTTGTTATTTCCATCAACGTAGGTCTTGGCATACTGCTTGGTGGATTTCT
TCTCGTCTTATCCTCCATTATTTACTGTGTGGTACGCGTCGTGCGAAGGA
GACGGGCAGCAAGGCTAGCTTTACTAgtagatgaagatgaagaataTGGC
AAATTGACAATACACCCTGCCGAGGAAGAGAGCGGTGTGGCTGGTGGTGA
GGCTGGAGCGGATGAAAAGAAGACTTCTGAAAAGTCTGAGAAGAAAAAGA
AGGTATctacattatttaaaaaaaaattttttcagtaatTTCTTTCGAAT
TTCTCATCACTAAGGTCAATAATAAGACGGTTTACCCCGTTCGCAATTTC
CCTTCcgaaaagaaagcaaaaacgTCAACCCCCGGATGCTAATTTTTCgg
ttttaaaagttcaaaagcaTAACCGAAGGCGAAGCTGGGAATTATGAAAT
TATGTATGTCATCTTGCTTCTATTTTCACaggataagaaagaaaaagata
aaggcAATGACAAAATCAAGCCAGATACTGAAGCCaaaaaaagcgatgaa
aaaagcaagaaacataaagaagataaaaagaagaaagatgaagaagataa
aaagaagaaagaaaaggaagataaaaagaaagaaaaggataaaaagaaag
aaaaggataaaaagaaagaaaaggacaagaagaaagaaaaacacaagaag
aaagaaactgcggacaaaaagaaagacagtgcggacaagaagaagaagaa
gaaggataaagaatctaaggacgaagaaTCAGCCGGAAAGGGTGATGACT
ACATTCCCATTGGGGATATCCCACCTCCTCTGGAAAATATCTATACGCCG
GGATTATCGAAATTCCCATCTGCCATCCCTCCACCAATGTCAAAATTTCC
CTCTGCCATCCCTCCACCAATGTCAAAATTTCCCGTCTGCCATCCCTCCA
CCAATGTCAAAATTTCCGTCTGCCATCCCTCCACCAATGCCAAAATTTCC
GTCCGCCATTCCTCCACCGATGGATAAATTTCCGTCCGCGATTCCTCCGC
CAATGGATAAATTCCCGTCAGCACTTCCTCCACCGCCGTTAGAAGGAGCA
GCTACAGAACGTAAGAAATCTTCACATCGTAAGCACAGCCATAGGTCTGG
AGTCTCCGCAGGTGCTAGTCATCATAGAACAGGA Coding sequence (CDS) from alignment at sc0000172_pilon:62610..65843+ >XLOC_043059 ID=XLOC_043059|Name=XLOC_043059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2246bp|location=Sequence derived from alignment at sc0000172_pilon:62610..65843+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAAATGAAGCTTTTCCGGATATTTACAGGAGTAGCGTTCAAGGTGGT
TAATAACAGCAAAATTAGTATTTCTGATATGGAGAAAAGGCAAACCGAAA
GATTTCGTAATGGAACTTATGGAAATGGCACAAGGACTGTTGTTCAAGTT
TCATTCAGTGATTTATTCAAAGATAAAGCTGCACTTAAAGGAAAAAATGA
AGCTTTTCCGGATATTTACAGGAGTAGCGTTCAAGGTGGTTAATAACAGC
AAAATTAGTATTTCTGATATGGAGAAAAGGCAAACCGAAAGATTTCGTAA
TGGAACTTATGGAAATGGCACAAGGACTGTTGTTCAAGTTTCATTCAGTG
ATTTATTCAAAGATAAAGCTGCACTTAAAGGTCTTGGCATACTGCTTGGT
GGATTTCTTCTCGTCTTATCCTCCATTATTTACTGTGTGGTACGCGTCGT
GCGAAGGAGACGGGCAGCAAGGCTAGCTTTACTAgtagatgaagatgaag
aataTGGCAAATTGACAATACACCCTGCCGAGGAAGAGAGCGGTGTGGCT
GGTGGTGAGGCTGGAGCGGATGAAAAGAAGACTTCTGAAAAGTCTGAGAA
GAAAAAGAAGGTCTTGGCATACTGCTTGGTGGATTTCTTCTCGTCTTATC
CTCCATTATTTACTGTGTGGTACGCGTCGTGCGAAGGAGACGGGCAGCAA
GGCTAGCTTTACTAgtagatgaagatgaagaataTGGCAAATTGACAATA
CACCCTGCCGAGGAAGAGAGCGGTGTGGCTGGTGGTGAGGCTGGAGCGGA
TGAAAAGAAGACTTCTGAAAAGTCTGAGAAGAAAAAGAAGgataagaaag
aaaaagataaaggcAATGACAAAATCAAGCCAGATACTGAAGCCaaaaaa
agcgatgaaaaaagcaagaaacataaagaagataaaaagaagaaagatga
agaagataaaaagaagaaagaaaaggaagataaaaagaaagaaaaggata
aaaagaaagaaaaggataaaaagaaagaaaaggacaagaagaaagaaaaa
cacaagaagaaagaaactgcggacaaaaagaaagacagtgcggacaagaa
gaagaagaagaaggataaagaatctaaggacgaagaaTCAGCCGGAAAGG
GTGATGACTACATTCCCATTGGGGATATCCCACCTCCTCTGGAAAATATC
TATACGCCGGGATTATCGAAATTCCCATCTGCCATCCCTCCACCAATGTC
AAAATTTCCCTCTGCCATCCCTCCACCAATGTCAAAATTTCCCGTCTGCC
ATCCCTCCACCAATGTCAAAATTTCCGTCTGCCATCCCTCCACCAATGCC
AAAATTTCCGTCCGCCATTCCTCCACCGATGGATAAATTTCCGTCCGCGA
TTCCTCCGCCAATGGATAAATTCCCGTCAGCACTTCCTCCACCGCCGTTA
GAAGGAGCAGCTACAGAACGTAAGAAATCTTCACATCGTAAGCACAGCCA
TAGGTCTGGAGTCTCCGCAGGTGCTAGTCATCATAGAACAGGAgataaga
aagaaaaagataaaggcAATGACAAAATCAAGCCAGATACTGAAGCCaaa
aaaagcgatgaaaaaagcaagaaacataaagaagataaaaagaagaaaga
tgaagaagataaaaagaagaaagaaaaggaagataaaaagaaagaaaagg
ataaaaagaaagaaaaggataaaaagaaagaaaaggacaagaagaaagaa
aaacacaagaagaaagaaactgcggacaaaaagaaagacagtgcggacaa
gaagaagaagaagaaggataaagaatctaaggacgaagaaTCAGCCGGAA
AGGGTGATGACTACATTCCCATTGGGGATATCCCACCTCCTCTGGAAAAT
ATCTATACGCCGGGATTATCGAAATTCCCATCTGCCATCCCTCCACCAAT
GTCAAAATTTCCCTCTGCCATCCCTCCACCAATGTCAAAATTTCCCGTCT
GCCATCCCTCCACCAATGTCAAAATTTCCGTCTGCCATCCCTCCACCAAT
GCCAAAATTTCCGTCCGCCATTCCTCCACCGATGGATAAATTTCCGTCCG
CGATTCCTCCGCCAATGGATAAATTCCCGTCAGCACTTCCTCCACCGCCG
TTAGAAGGAGCAGCTACAGAACGTAAGAAATCTTCACATCGTAAGCACAG
CCATAGGTCTGGAGTCTCCGCAGGTGCTAGTCATCATAGAACAGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000172_pilon | genome | sc0000172_pilon:62610..65843 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 928-1125:3037 |
| Aaloc | 868-924:2980 |
| Aaloc | 421-867:2532 |
| Aaloc | 193-420:2075 |
| Aaloc | 1-189:1 |
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