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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000172_pilon:122867..125857+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043057 ID=XLOC_043057|Name=XLOC_043057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2991bp|location=Sequence derived from alignment at sc0000172_pilon:122867..125857+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGGCGatctttctctttttaaatcgtGCAGGTCGAGCAAACCACCTGAA
ACGTGTTTACGAACTTGAAGGGTTGATGTTGGATCTGGATGCTCATTTGA
GAGGTGAACCTCAGAACTTGATGCAGATGAAACAACCTGCCACTGATATC
TTGAACTCTTCCGTTTTCGATTATGACCAGGGAAGCAGGTACGTACTTCA
TGTCTCAcaaatattgataattttgacTTCCAATCTATGTTGAAATATAT
AGAGAATTTCGGTtattatttcctcgtttttggaaatttgaagtTCGGGA
GAGAAAGTCGCTTTTTGGCTATCTATTAAATGTAAtcgaattttttaatt
tggatgggttttatagacttccaggctatatttggagctttattggacca
ttcttgaacttttgcaTCTTAGAGTTAAagctctacccttccaacctaaa
tgttagcgcttccaaatcgtttgttgctgtaagatttcgtgggaattccc
cttttttctcaaatattatgacgtTGATTGCAATTTGACCCAGCTTAACC
GGAACCCAACCTATTGTTGTTAAGGTGGATAAGACTTTTCTTTTTACCGT
TTTATTTTAATACGTCATCAAAAGAATAAAGCTCACTCTCACAAATTGAT
GATTGAAACgggaacctaatttttttcgaaattacagagagattcaaatC
ATAACAGGTGTTTATTGCTGACCTTTCCTATAAACTCgcgaaattcttca
aaattactttttgtcaaattaaagtTATTAGTTGATTCACCAAATTGTAA
CGCCCACTAGCCAACCAAAATTTCTTGTCTCGGAAGTTTTTCTCTTAAGG
TAATCGAACCTCGAAACAGTATGAGCCccaattattttttatctaattgT
AGATGTGAATTTCATGAAGACGAAATGAACGAAACGGACACAAAACATTG
TGCTCTTGGCCAAGCTAACCGATACTGGTGAATTCTTATTTTGAAGTTAA
CCTTGTTCTATTTGAAGTATTCCGAATGTAGACGGAAACCCGTTTAGTTT
AATGTTATTACAACGATATCAGTCGTCAGTCTTAGACCCTGCTCGGACTT
TACGGTTCCGTATCGTTCCGAAATAAAACGATTCCGAAACGTCAAAAAGG
AGAacacgttacaaagcaaaacagactgaaacggtttcgctccactattt
tcatcgtaacggaactgctccgttttcttgctccgaaacgttccgaaact
aaTATGAACACTCTTGATCCGTAACGGAAACCATACCGGAGCGAttcgaa
accgtaacgtctgaacatggtctcaaTAACGAGCTTTCAATCATGAAATT
CCCAAACAGCCTGGAAAATTGGAAGTTAACAATGTGCGATTTTAATGATG
AGTTTAATTGCTTTTACTGTATatggtgtccctaattaaagtatcgagtc
gaaacacaactatgagtagaaagttttatgtgcgtgttcacaaaattgta
ttttaagctctccctcttttttctttgtcattacaattaatttatacgtt
gtaactacctgttgtaataagcctgtgtgatggagaacgttcttatattt
tagtgataacacacacaaacttttctactcaatcgcatgttcaaactcga
tactttaattagggacaccctgtatatggCATCAATCGTGGGAATACact
tttttgagctttttccttttctttgcaATCACACTTGATTCTGCTAATAA
AGTTCGATGTTAAAAACTTACCCTTTCCttgacttttgtttttgttttcc
tgcagtttttgtttggctgattatttttgtACCAATCACGAGATCCAAAT
TACAGACCGTCATTTACCACCCAAACAAAATGACGTCTGTTATACCGTCA
TCCCAAGTAAAGATGCCGTCAAACAGCgaagacaacaacaacaacaccaa
aTGTCGCCTCGATTCCAAAATGGCGGAGGAGGTGCGACTTGGGGTGGAAA
TAGTGTTGGCGGTTATTCAACACCTGGTTCCAGTATAGGAGGTTTCACAA
CTTCTGTTTGctttgcttatttttttggattttattaGGTATCAGCATCA
ACCTGTATGAAAAGCTTGTGCTGAGTCATCCGCCATGTTTTATCGGAATG
TTTTTTATTAgcaccctaatggtagcactaaaAACTCGATGTGTTTCATT
TTATAATATGATCCTTTTGTCTGTTATTAAAAAAGTCCCAAATTGAGTAG
TGTTACCATTAGGGTGCCAAACTCAAATAGCTCACATCAAAGATTTCGTT
TAACCGAGATaaagtacttttgttttctctttttctgtttcgttttcCCG
AAAACTTGAGAGTAGAGGATTTATAGAAAGCGGTAAGATTCAAAGGGGAA
CCACAAAGCATATGTGCAAAactatggatttttttaaacacaTTGTATTT
CTTGCTCTTACAACCAGGATCTGACGATTTAGCGGCTCGAGTAGCAGAGA
AATTACGTTTAGAAGAGAACAATCGAATGATGGCCCATCAACAATTCGTA
GATGAAGAAGAAGCCGCCCGCACCAAGGAAGAGGAGCaaaaaaaGAGATG
GGCGGCATTAAGGGGAAGCCCTAATAAGCAACAAAACAATGCCCAACCCT
CGAATCCACCACCCGCTGCCTCTAGGGGTAGAGGGCGTGGCCGAGGTGCA
GCAGCGATCCAAAATCTTAGACGCCCTGGAGAAAAAGCATCAACAAGCCC
AACTATGGAACAGCCAAATGGTTTTTCTTCAAATCCTTCCATACGCCCGC
CGCCTGGATTTTCAGCGGGTCCACCGCCCGGGTTTAGCGGAGCCCCTATC
GGGCGTGGCCGAGGAACCCAGCTTCATATACAACAAATAGACAATACAAT
CAATAGTCAAGATGAGCAAAAATGGGCGGGCTCAACACGCGCCCCTAGTG
CAGCAGAGGCACCCCGCCCACCACGTGCTTGGATGTCCTGA Coding sequence (CDS) from alignment at sc0000172_pilon:122867..125857+ >XLOC_043057 ID=XLOC_043057|Name=XLOC_043057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2046bp|location=Sequence derived from alignment at sc0000172_pilon:122867..125857+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGGCGatctttctctttttaaatcgtGCAGGTCGAGCAAACCACCTGAA
ACGTGTTTACGAACTTGAAGGGTTGATGTTGGATCTGGATGCTCATTTGA
GAGGTGAACCTCAGAACTTGATGCAGATGAAACAACCTGCCACTGATATC
TTGAACTCTTCCGTTTTCGATTATGACCAGGGAAGCAGTTGGCGatcttt
ctctttttaaatcgtGCAGGTCGAGCAAACCACCTGAAACGTGTTTACGA
ACTTGAAGGGTTGATGTTGGATCTGGATGCTCATTTGAGAGGTGAACCTC
AGAACTTGATGCAGATGAAACAACCTGCCACTGATATCTTGAACTCTTCC
GTTTTCGATTATGACCAGGGAAGCAGATGTGAATTTCATGAAGACGAAAT
GAACGAAACGGACACAAAACATTGTGCTCTTGGCCAAGCTAACCGATACT
GATGTGAATTTCATGAAGACGAAATGAACGAAACGGACACAAAACATTGT
GCTCTTGGCCAAGCTAACCGATACTGtttttgtttggctgattatttttg
tACCAATCACGAGATCCAAATTACAGACCGTCATTTACCACCCAAACAAA
ATGACGTCTGTTATACCGTCATCCCAAGTAAAGATGCCGTCAAACAGCga
agacaacaacaacaacaccaaaTGTCGCCTCGATTCCAAAATGGCGGAGG
AGGTGCGACTTGGGGTGGAAATAGTGTTGGCGGTTATTCAACACCTGGTT
CCAGTATAGGAGtttttgtttggctgattatttttgtACCAATCACGAGA
TCCAAATTACAGACCGTCATTTACCACCCAAACAAAATGACGTCTGTTAT
ACCGTCATCCCAAGTAAAGATGCCGTCAAACAGCgaagacaacaacaaca
acaccaaaTGTCGCCTCGATTCCAAAATGGCGGAGGAGGTGCGACTTGGG
GTGGAAATAGTGTTGGCGGTTATTCAACACCTGGTTCCAGTATAGGAGGA
TCTGACGATTTAGCGGCTCGAGTAGCAGAGAAATTACGTTTAGAAGAGAA
CAATCGAATGATGGCCCATCAACAATTCGTAGATGAAGAAGAAGCCGCCC
GCACCAAGGAAGAGGAGCaaaaaaaGAGATGGGCGGCATTAAGGGGAAGC
CCTAATAAGCAACAAAACAATGCCCAACCCTCGAATCCACCACCCGCTGC
CTCTAGGGGTAGAGGGCGTGGCCGAGGTGCAGCAGCGATCCAAAATCTTA
GACGCCCTGGAGAAAAAGCATCAACAAGCCCAACTATGGAACAGCCAAAT
GGTTTTTCTTCAAATCCTTCCATACGCCCGCCGCCTGGATTTTCAGCGGG
TCCACCGCCCGGGTTTAGCGGAGCCCCTATCGGGCGTGGCCGAGGAACCC
AGCTTCATATACAACAAATAGACAATACAATCAATAGTCAAGATGAGCAA
AAATGGGCGGGCTCAACACGCGCCCCTAGTGCAGCAGAGGCACCCCGCCC
ACCACGTGCTTGGATGTCCTGAGATCTGACGATTTAGCGGCTCGAGTAGC
AGAGAAATTACGTTTAGAAGAGAACAATCGAATGATGGCCCATCAACAAT
TCGTAGATGAAGAAGAAGCCGCCCGCACCAAGGAAGAGGAGCaaaaaaaG
AGATGGGCGGCATTAAGGGGAAGCCCTAATAAGCAACAAAACAATGCCCA
ACCCTCGAATCCACCACCCGCTGCCTCTAGGGGTAGAGGGCGTGGCCGAG
GTGCAGCAGCGATCCAAAATCTTAGACGCCCTGGAGAAAAAGCATCAACA
AGCCCAACTATGGAACAGCCAAATGGTTTTTCTTCAAATCCTTCCATACG
CCCGCCGCCTGGATTTTCAGCGGGTCCACCGCCCGGGTTTAGCGGAGCCC
CTATCGGGCGTGGCCGAGGAACCCAGCTTCATATACAACAAATAGACAAT
ACAATCAATAGTCAAGATGAGCAAAAATGGGCGGGCTCAACACGCGCCCC
TAGTGCAGCAGAGGCACCCCGCCCACCACGTGCTTGGATGTCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000172_pilon | genome | sc0000172_pilon:122867..125857 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-1023:2470 |
| Aaloc | 265-498:1807 |
| Aaloc | 190-261:904 |
| Aaloc | 1-186:1 |
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