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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:985969..988660+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043056 ID=XLOC_043056|Name=XLOC_043056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2692bp|location=Sequence derived from alignment at sc0000026_pilon:985969..988660+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCCAAGCATGCTTTTATCGTGTATTCTATTGGTCCTGTTAGGAAC
TACAGAGCTTGCACCGGCCCCATTGGACGACTTATCGGCCTGCGTGAACC
CATTCACCAATGAAACTTACAAAGATGGAGACAATTGGATGGAGGGAAAA
TGCGCACATTGTTCATGTGACCAAGGAAAACGTTTTTGTGCTTTGGAATC
CTGCAAGATTGATTGTGATCCAAAATACTTAGTCCAGAAGGAAGACAGAT
GTTGTCCAATCTGTGTCCCACCACCACCTAAAGACTGTATCGATGAGACA
ACTAATACTACCCGACCACACAAATCTAACTGGAAGCCTGACGCATGCTC
TTCATGCACGTGTGAACACGGTGAAACCATCTGTGCAACTCAAGATTGTG
CACCAGTTATGTGTAAGGACCCAGTTACACCAGAAGGTGAATGTTGCCCA
CGATGCGTCACACAAGAATGTTGGGATAGAGAGTCGAAATCATATTACAA
AGAAAGTAAGTTTTCTTGCTTCTTTACTCACCGGAGACTTCTTATATTTC
AACTTTCACAGCCCTGGACATTCTACTATCTATTGAGTATCCAtgattca
caaaaaaaaaaaaattcaaattcagatAGTTGATACTACTTCATTCTAAT
CAATAAAGCCAAAAAGTCGCAAGAtctttggatttcttttttgaaaaaag
cgtttagaaactttgtatgtatGTAAGTCCACGAGAATGCAAAAaggaaa
ctttaaaaaatgctgaACATTCAAATCTTAAGCATCTTACATTTGTCATT
CCACTTGCATCAATAATCTAAACATAAGCGAAACTTTCATCATCTTCTTA
AATTCTACTCGATTTCTTTCCACAGTGGACAAATGGACAATGAGTGACGG
CTGCACATCGTGTTTCTGTTTCATGGGCAGCCCAATGTGTATGTCACCTG
GCTGTGCTCTTGAAGAATGTGACGAAGGTGTGAAACATGTCAAAGTAAAA
GGAATTTGTTGTCCAGTCTGCGAAAATAAACTCATCTGTGAAGTAGAGGA
TGGTCGAAAATTCGTCGAAGGTGAGACATGTATTTTGTAAGACTTGAGAC
ACAACCATTTCTCACATTTTTGGGGACTCCTTTCTAACTGATATAATGTC
TCGAAATTTTTCCTGTGATATCAATTCGCTGGGATGTGATCCTCGCAGTT
ATACTGCAAAGCAAAGAAGTTTCATTTACACTAGATTTCTAAGTTGTAAA
CAATATAGATTAGAAATCCCCACGTATCAAAACCAGGTATTTCCATATCC
ATTAACTTGGCTACAACTTCAACCGCAGTGTCCAAAGAAATGTTACTGGG
GTGCATCGAGACAGGAGTGTTTCAAGATCTTTTTCgccaaataattttca
aaatacaagCCAATCACTTAACAATTGAGCCAAATTGGACATAACcttca
ataaaaatttgattacagAACGAGCATATTGATTCGTTTTCTAAATAAGA
TAATTATTTATATATGACAATCGATTGAGTTCTATGTCGTCAATCAGGTG
TGATATTTAATCAATCTCGGGTCCAAATACTAAGTCCATTTTTCAGAGAG
AAACATAGGTCCTTTGTGGGTCTTATTTCGCCGGACagttttctctttct
tttcttttaatttctggaaaacttataattggacataattttaatttctt
ctttaaaattctACATAGGAAACCGTTGGCAAGATGATGATTGCAAAGTT
TGCAAATGCACCAAAGACGGAATCCAATGTAATAATCCAATCTACGAGAA
AGATCAATGCGACAGCAACTTTGTACAATTGAATCAGAAATGCCCAAAAG
TTTGCTTGAATGGTAAGGCGTTTTAAAATCTATAATCTTTTGCCACACCC
TCTTCTAATAGACCCGATAGAATTTTTTCAGTAGCTTGTGGGGGTAATAA
TAATGGTCTGAAGCTGGATGGAtgttgatattcccatgtttttcgTGGCT
GGGGGTTGGAATTTTACTGCTTTgaagccagaaaattcagtgaggatgga
aaaaatagctcCATATTTTACCtcaaagatttgtttacatTCGATTATTT
TCATCGGGGACGAAAATTGGACTATAATTTTCAACTGGGAACgatatttt
tgctaatttttccagtgggtcggGGTTCCAACGGGCCCGAGAAGGAGGTG
ACCATCATATCAGTTCATCCATGTAGCCAGCTCttgtattgttttgaaaa
aagtctgaAGACTGTGATAGATAGTTTAACCAGACCTGATTACTGTGaga
atttttaatcaaaagacaATATTTTTTGTCCGTCAATCATAATTTTGTCA
TAAAATGTCTTTGTCTAAATTTAAACCGTATTGCTTCGAGTAAACGCCCC
TTCCTGTTGGGACTTCTTCCAAACTGATAAAATATGTCTGAATATCCTTC
CTTTGATATCAATACCAATACAGTCACCTTAGTAATATCAATACCCTAGA
GGAAATCATTTCAATGAACGCTCCCCCTCTTCAAATAAACGCGCCCCATC
AAGGCGTCTGATGATTAATGTAAATGTTTtctatttcatttaatttttag
cTTCGAAACTCcgtaaagaagaaaaacaacaagaaggggaaaatgaaaag
gaagaagaagaagaagctgAGGTCAATCCGATCTATCCTTGA Coding sequence (CDS) from alignment at sc0000026_pilon:985969..988660+ >XLOC_043056 ID=XLOC_043056|Name=XLOC_043056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000026_pilon:985969..988660+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCCAAGCATGCTTTTATCGTGTATTCTATTGGTCCTGTTAGGAAC
TACAGAGCTTGCACCGGCCCCATTGGACGACTTATCGGCCTGCGTGAACC
CATTCACCAATGAAACTTACAAAGATGGAGACAATTGGATGGAGGGAAAA
TGCGCACATTGTTCATGTGACCAAGGAAAACGTTTTTGTGCTTTGGAATC
CTGCAAGATTGATTGTGATCCAAAATACTTAGTCCAGAAGGAAGACAGAT
GTTGTCCAATCTGTGTCCCACCACCACCTAAAGACTGTATCGATGAGACA
ACTAATACTACCCGACCACACAAATCTAACTGGAAGCCTGACGCATGCTC
TTCATGCACGTGTGAACACGGTGAAACCATCTGTGCAACTCAAGATTGTG
CACCAGTTATGTGTAAGGACCCAGTTACACCAGAAGGTGAATGTTGCCCA
CGATGCGTCACACAAGAATGTTGGGATAGAGAGTCGAAATCATATTACAA
AGAAAATGTATCCAAGCATGCTTTTATCGTGTATTCTATTGGTCCTGTTA
GGAACTACAGAGCTTGCACCGGCCCCATTGGACGACTTATCGGCCTGCGT
GAACCCATTCACCAATGAAACTTACAAAGATGGAGACAATTGGATGGAGG
GAAAATGCGCACATTGTTCATGTGACCAAGGAAAACGTTTTTGTGCTTTG
GAATCCTGCAAGATTGATTGTGATCCAAAATACTTAGTCCAGAAGGAAGA
CAGATGTTGTCCAATCTGTGTCCCACCACCACCTAAAGACTGTATCGATG
AGACAACTAATACTACCCGACCACACAAATCTAACTGGAAGCCTGACGCA
TGCTCTTCATGCACGTGTGAACACGGTGAAACCATCTGTGCAACTCAAGA
TTGTGCACCAGTTATGTGTAAGGACCCAGTTACACCAGAAGGTGAATGTT
GCCCACGATGCGTCACACAAGAATGTTGGGATAGAGAGTCGAAATCATAT
TACAAAGAAATGGACAAATGGACAATGAGTGACGGCTGCACATCGTGTTT
CTGTTTCATGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTGAAG
AATGTGACGAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGTCCA
GTCTGCGAAAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATTCGT
CGAAGTGGACAAATGGACAATGAGTGACGGCTGCACATCGTGTTTCTGTT
TCATGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTGAAGAATGT
GACGAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGTCCAGTCTG
CGAAAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATTCGTCGAAG
GAAACCGTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCACCAAAGAC
GGAATCCAATGTAATAATCCAATCTACGAGAAAGATCAATGCGACAGCAA
CTTTGTACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAATGGAAACC
GTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCACCAAAGACGGAATC
CAATGTAATAATCCAATCTACGAGAAAGATCAATGCGACAGCAACTTTGT
ACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAATGcTTCGAAACTCc
gtaaagaagaaaaacaacaagaaggggaaaatgaaaaggaagaagaagaa
gaagctgAGGTCAATCCGATCTATCCTTGAcTTCGAAACTCcgtaaagaa
gaaaaacaacaagaaggggaaaatgaaaaggaagaagaagaagaagctgA
GGTCAATCCGATCTATCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:985969..988660 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 847-936:2603 |
| Aaloc | 703-843:1721 |
| Aaloc | 508-699:878 |
| Aaloc | 1-504:1 |
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