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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000174_pilon:177913..183260+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042995 ID=XLOC_042995|Name=XLOC_042995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5348bp|location=Sequence derived from alignment at sc0000174_pilon:177913..183260+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTCacaagaagaacaagaagaaacggaagggaacaaaacaaatat
tgaagaagaagaaggtgaaaatgaagaGCCAACAATTATTGAAGAAACAC
CACCTGAAGAACAGAAAAGTAATGCTGGCAATGCTGCAGAAAGTGTACTC
GAAATTATGGTCATGTTTCTTGAAGGGGAGGTAAGATTGGGTCAAAGACC
GTAGAACAACTTTATTGCGTAGACGAGAGGCAcgaaatttgtgtaggaga
ccATATCTTAATGACACAGTAGTAGTTATCtatttatattatgaatagat
aattattGTCATatagtgtcataaaaatctgctctcttaCACAAATGGAA
AATCTAGTTCTGTCATGTTATATAGAGTGATTAATTTcttgtcttcaaac
ttttgcccaaaaaacaatcgttttatttttcgaaatagGGGACTATTTCT
CAATTGATCCCAGCCTCAGAGAAcagaagttttttttaaattttattcat
tGCTGTCATTGTAACAATTTGATGTTTTACGTTCGTATTCCTTTGTAGAG
TCCAGATTTACGTACATCAGTCGCAGAAGGGATGGCTAAATTACTGATCT
CTGGACGAATCGTGAGCGCAAAGATTTTGACGCGTTTGATCTTGTTATGG
TATAATCCAATCACAGAGGACGACATCAAATTACGTCATTGTATTGGCGT
GTTTCTTCCACTCTTCTCCTTTGAGAATAGGTAAACTGATtgttattttt
aattgtttataAGTCGGTCAACGTATCACCTAAATAAGTTCTTTAAAAGA
AAGAACTCTTTGAAATAAGgatcgtttttttcacatttcaaagggtcgga
aaattcacaattttttgGTTACCTCGAagggtaggattttttttcgaatg
gAAGAAAAAGTCTCTAAGAGTCGGTTTCGTAGGTCCCGTCCGGACATtcc
cctcatccgccaaccctagttaccccccggactaTGATGCAGCAGGAATA
TTCAAATCAATTGcccaattcttcttttcttttcattgacTATAGATCAC
ATCAAGAGATTTACGAAGAGACCTTTTTACCTGTTCTTAAAACTTTGTTG
AACGCACCGACCTCTTCACCATTGAGTCGTGTTGACGTCACGAATGTTGT
AGATCTTTTGATCCAATTGACTGATGTTCGAAATTTGGTACAATTCAACG
TGACCACCGACACTTCACAGAATAATTTACTCAACACGCTGGTAAGCTTT
TCTTTGTACTATTGTTCATAGGACATACAAGATTCTCAATTTCAGTGTAA
ACGATGGTGATAATATTTGATGTCggctgtctgtctgtctgtctgtctgc
cATAACTTTGGACAACCTGGAGACTGACAAAAATGGTTGGAGTTTAGACT
aaaaaaaCATATCTTGTAACTTTCTATGGGATGTTTGAATTTTTATCGTT
CGAAAAGTCTTTTATACTTTGCTCGATATGTGGTCCGTCTATACTTGgcc
gaaattttgaaattcgttTCTTAGGTTAATATCTGCGAAGCAATTAATTC
ATTGattagaaatttcaattttttgctgtCGGTGACGAGTCTTGGCTTCT
CAGCAGATGTTTTTATGTCCCCCTAGCACAATGAATTGCTTCATTAAATT
CCCGTACTGGTGGCTGGACGaactttttcaagtcaaaaaatattcttaaa
aatgtgTGGATATTCCTTGGAAAAATGGCGAAATTTTTAAGTGACGGTGG
ACGAATTAAAATCAGTCCTTACCCCCTGAAAGTTTTAGATTAAAAATTAC
CCActggaaaataaaaagtacTCCTGTAGAGCCCCCTGGAAATACTTTCc
agattaccctctggaaatgttcgtccacctcCTGAATGGATACACAATAA
AATGGCCAAACCAATCCAACTTTATTCATCTCAGTTTCtttttttAACAG
GAAACACATGTTCACGATTCACTAGCAATGCGATTAGCCAATGAAATTCT
TTCCGACCCTGAAGATCCAGATGTCAAATTATTTTGCAAAACGCTCACTC
AATTAGCAATCTGTCCAAAGAATGTGGCAACTATTCGCGATCTTATCGAA
TTGTCAAGCCAGATAACAGAGGTAATATACTGTTCaaaaaaaCTCACAGT
ATCACTTATCTTTTTAAGGAAACTTCGGAGTTTTAACATTTCAGTTGAGC
CTCTTAATTCgagcctctataactcgaacaagtttcccCGTCCCTTCAGG
tagcaacgttgtttcaacgttcatctaacgttatatggacgttgtgaacg
ttagataaacgttgaaacaacattgtgtccCTTCAGATAGCATTGCAAAC
CTTACAAACCTGACTCCATGACTCGAAATTTGTGTTTTCCGTGCTTGTTC
GACTTATGGGGACTCCACTGTGTCATTTCTATATCGACATATTCATTACT
TGGTTGATTGCtatctttattatttttcaggTATTTGAAGGGAATCGCGT
AGCTAAAAAGTCGATCGAAAAATTCCAGAGCACTCTAGAACGCCTTTTGA
TAGACGGAGGAGGTAAATCTTTGTTTGCCCCTTATATTAAGCAgtttaaa
cagttttttttaagcAGTAGATGCATACATCAAGCCCGTGCAGAAACTGC
CGGACCTTGACGGTGtcggctttttgtaatcaccttacaaattgtatAAG
TAgctttgacttttattagcctttgttgctacctgttcgtcaacttgaaa
taaactattacatacatacatacttTGCTGTGTCTTTTTGTCAAATCGAC
AAACTTATTGTCGCAAAAAATGGGTTGTCATTAAATCAATCCCATTACAG
ATCATTGATCCCACGTACACCACGCTCCGTTCTAAAGTGATGTGTGACAA
TTTGACCTGGTTgttcagaaaattttcagaaacaaTCAATACAGCTTTGC
GTTTTGCTTTAGAATGAAAGCGAAaatgaaagcgaaagtgaaagcgCTTG
GGTTCTATatgtttgtttctgacgtttgatttttttacaattGTTTTGCC
GCATTCGAAAGcttatttaatattcatcccgAAACtggatgaaaaatatc
aaagcgGTCCGCTGACCTAGGCTGATTCTCCTAGCCATTGCCTTTAGAAT
GCATACGTGTAATGTATTGCATAGTATCAGAATTTCACTTTCAACTTTTG
CATAACAGGTAGTATGTCATCAACTGGACAAGAAAGTCAAGATGCTACCG
TTCCACCAGCAGTAGAAGCCAATAGTACACCGATTGCTGATCTCGATAGT
GGTGCGCGAAATAACACATTGACCGACACTGATGCCGATAAAACTTTGAC
GGATACTGAGAATGGTAaaagcttttctttttcttctatcTATCCGCGTG
TTTGATTCTAATCTCCATTATCTTTTGTTACAAGATTTAACGATTTTTCT
CCtatatatattttgtatttgattaACGTGCAGCAGTGTctcttttcatc
caaaaattatATGCAAAGTTTGGGCTATTCATTGTGTTATCAAAAGTTAC
ATCAATACTGTTAGCTTGAGCCGTTAGTGGAAAAACATCTTTAGGACCGT
AAATTGTCAAACGTTGATTTTTGTTAGTCAGAAAGCTGCCTTGTGAACCC
CAAAATGCTTGCACGTCTGTTATTCTTCGTTATATCTTCAAGCTATCAAT
TTAGAATTTTTAAGGGTGATTCATTAGACTTAAAACTTCATAAAAATCCT
ACTTTCCTTTCCATTTAGTaatctaataataataatttctaTTCGTCAAA
GGCTGAATGCAATTTTATAATTTCGTCATTGTTTTAGAACTTCCACCCAA
CAAACATAAGTTGTCTTCTTCGAGTGAAAAAATTGCATCCAAATCAAAAC
GATCGAAAATACAAGATTCGCGCGTCAGGTAAAAGACTAACACTCCAAGT
CTACTAAACCGTGTTAAAAGAGTTTTAATGAATAGCAAGCTTGAAAGACG
TGTGTCATGAACATGtcattaacccccccccctggttaaTCCATGATCTT
CATGACACACGTCTTTTCATAATTTCTATGGAAACGACTTGGATTTGCCA
GTGGTTAGATATGTAATCAAACGATTTGGAAtattattggaactaatttt
agcaGGAACTAATATTAGCGATCggaagaaaaaatcgGaaaaatagcatt
tcgcgggttttaattttaattttcgcggttttgcccttttttggacaaat
ttcttttattttcctagggatttttcaaatttttcgataaaattggaaaa
aattgtacttTGCGGGTTAGAATTGATTactaaaaaaattgaactttaaa
cactaaaattaattcccacgaaaattagttccaataaggtagagCACATT
GATTTGAACGGAATGTTACATCAATTCTAAAAGTAATGATCTGATACCTA
GTCATAGATGTTATCTTTCTCTTTACGTGAGTCTGATTTCCCTTGTATAA
ATTCGAGATGAACCTTTTACAAATCACTTTACCGCGATTATTTTCCGTTC
TCATTTTCATAGTTCTGCAAGTGTTGATTTTCGTGTAAATCCAAAAGCTT
CTACAGTGTAAGTTCTTTTTATCGAAGTAACggtttataaaattttacat
tGTGAACATAAGTAAACTACAATGTACTTTCGCGGAAACTCTGACAATGT
CCATGAATCGAAAGCAATGCTTTAGCATGTTCAGTTTAATGCGAACATAA
TTGGCATGTTATTCAAATATACACCTCAGCTAAGGCTTTACagataacaa
aataaaaattaccaGTTAGCTTCACTTTCTCGTTATATCAACGAAACCAT
CTTCATTTACCAgattattaaatttttctctatttggtaatattccactc
ttgaatatcttttcaacgtgCTTAAAACCGCTagttaatttttataattt
ttattgaaTTAAGTTACAGCGTGGCATATTTCCATAACTCATAGGAATTA
TCATTTTACATTAAAACAAATAtgatacatgtttttataagaacatacaa
aattttagagacctcagatgttcttaactctttTTAAGttgtaagcctaa
aaatgttcttaaccagTTTTTCACCTGTTTGTGGGTATTTTTATGTGATT
CCCTAAAATAATGGGTGTTTTAGAtttcgcaaagccttaaaatgttctta
acttgttcttaagattttggccctatgttcttatatagtttgttcttata
aaaaaccttgAAGTACTAATAATGTCTCCCAtttttttCTGGTTTTCagt
gaagtcgaagacgaagatgaagaaatggaaagcgaaagtgaaagtgaa Coding sequence (CDS) from alignment at sc0000174_pilon:177913..183260+ >XLOC_042995 ID=XLOC_042995|Name=XLOC_042995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000174_pilon:177913..183260+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTCacaagaagaacaagaagaaacggaagggaacaaaacaaatat
tgaagaagaagaaggtgaaaatgaagaGCCAACAATTATTGAAGAAACAC
CACCTGAAGAACAGAAAAGTAATGCTGGCAATGCTGCAGAAAGTGTACTC
GAAATTATGGTCATGTTTCTTGAAGGGGAGATGGTTTCacaagaagaaca
agaagaaacggaagggaacaaaacaaatattgaagaagaagaaggtgaaa
atgaagaGCCAACAATTATTGAAGAAACACCACCTGAAGAACAGAAAAGT
AATGCTGGCAATGCTGCAGAAAGTGTACTCGAAATTATGGTCATGTTTCT
TGAAGGGGAGAGTCCAGATTTACGTACATCAGTCGCAGAAGGGATGGCTA
AATTACTGATCTCTGGACGAATCGTGAGCGCAAAGATTTTGACGCGTTTG
ATCTTGTTATGGTATAATCCAATCACAGAGGACGACATCAAATTACGTCA
TTGTATTGGCGTGTTTCTTCCACTCTTCTCCTTTGAGAATAGAGTCCAGA
TTTACGTACATCAGTCGCAGAAGGGATGGCTAAATTACTGATCTCTGGAC
GAATCGTGAGCGCAAAGATTTTGACGCGTTTGATCTTGTTATGGTATAAT
CCAATCACAGAGGACGACATCAAATTACGTCATTGTATTGGCGTGTTTCT
TCCACTCTTCTCCTTTGAGAATAGATCACATCAAGAGATTTACGAAGAGA
CCTTTTTACCTGTTCTTAAAACTTTGTTGAACGCACCGACCTCTTCACCA
TTGAGTCGTGTTGACGTCACGAATGTTGTAGATCTTTTGATCCAATTGAC
TGATGTTCGAAATTTGGTACAATTCAACGTGACCACCGACACTTCACAGA
ATAATTTACTCAACACGCTGATCACATCAAGAGATTTACGAAGAGACCTT
TTTACCTGTTCTTAAAACTTTGTTGAACGCACCGACCTCTTCACCATTGA
GTCGTGTTGACGTCACGAATGTTGTAGATCTTTTGATCCAATTGACTGAT
GTTCGAAATTTGGTACAATTCAACGTGACCACCGACACTTCACAGAATAA
TTTACTCAACACGCTGGAAACACATGTTCACGATTCACTAGCAATGCGAT
TAGCCAATGAAATTCTTTCCGACCCTGAAGATCCAGATGTCAAATTATTT
TGCAAAACGCTCACTCAATTAGCAATCTGTCCAAAGAATGTGGCAACTAT
TCGCGATCTTATCGAATTGTCAAGCCAGATAACAGAGGAAACACATGTTC
ACGATTCACTAGCAATGCGATTAGCCAATGAAATTCTTTCCGACCCTGAA
GATCCAGATGTCAAATTATTTTGCAAAACGCTCACTCAATTAGCAATCTG
TCCAAAGAATGTGGCAACTATTCGCGATCTTATCGAATTGTCAAGCCAGA
TAACAGAGgTATTTGAAGGGAATCGCGTAGCTAAAAAGTCGATCGAAAAA
TTCCAGAGCACTCTAGAACGCCTTTTGATAGACGGAGGAGgTATTTGAAG
GGAATCGCGTAGCTAAAAAGTCGATCGAAAAATTCCAGAGCACTCTAGAA
CGCCTTTTGATAGACGGAGGAGGTAGTATGTCATCAACTGGACAAGAAAG
TCAAGATGCTACCGTTCCACCAGCAGTAGAAGCCAATAGTACACCGATTG
CTGATCTCGATAGTGGTGCGCGAAATAACACATTGACCGACACTGATGCC
GATAAAACTTTGACGGATACTGAGAATGGTAGTATGTCATCAACTGGACA
AGAAAGTCAAGATGCTACCGTTCCACCAGCAGTAGAAGCCAATAGTACAC
CGATTGCTGATCTCGATAGTGGTGCGCGAAATAACACATTGACCGACACT
GATGCCGATAAAACTTTGACGGATACTGAGAATGAACTTCCACCCAACAA
ACATAAGTTGTCTTCTTCGAGTGAAAAAATTGCATCCAAATCAAAACGAT
CGAAAATACAAGATTCGCGCGTCAGAACTTCCACCCAACAAACATAAGTT
GTCTTCTTCGAGTGAAAAAATTGCATCCAAATCAAAACGATCGAAAATAC
AAGATTCGCGCGTCAGTTCTGCAAGTGTTGATTTTCGTGTAAATCCAAAA
GCTTCTACAGTTTCTGCAAGTGTTGATTTTCGTGTAAATCCAAAAGCTTC
TACAGTtgaagtcgaagacgaagatgaagaaatggaaagcgaaagtgaaa
gtgaatgaagtcgaagacgaagatgaagaaatggaaagcgaaagtgaaag
tgaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174_pilon | genome | sc0000174_pilon:177913..183260 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1105-1152:5301 |
| Aaloc | 1060-1101:4564 |
| Aaloc | 970-1056:3840 |
| Aaloc | 814-966:3211 |
| Aaloc | 730-810:2481 |
| Aaloc | 559-729:1951 |
| Aaloc | 364-558:1047 |
| Aaloc | 181-360:549 |
| Aaloc | 1-180:1 |
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