XLOC_042989 (mRNA) -

Overview
NameXLOC_042989
Unique NameXLOC_042989
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000174_pilon:347623..348556+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042989 ID=XLOC_042989|Name=XLOC_042989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=934bp|location=Sequence derived from alignment at sc0000174_pilon:347623..348556+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTATTCGAACAATCACCGAAAAACCCATTAAATATCTCTTGATTTCACA CAATCATTATGATCATGCGAGGGGAGGGAAAGTTTTCAGTGATATAGGAG CAACGGTTATCGCTCACCAAGAAGCGGCCGAATGGATGGAAGAATACCCA ACGGATGATCTGTATTTACCTGACCGAACGTGGAGAGGGAAGAAACAAAC TCTATGTCTAGGTAAGCTCTAACTGACTTTTTTGTTGGAtgccaaaaatt tgatattcaTGATTGTAACAACATGAAATTTACTTTAGCCCCTTAGCTCT AAAACATCAGACAGCCAACGTAAAACATGTTGCATCATGTTTTCAAGCTT ACACATTTCTATGCTATgctgttatcttttcttttttcgctcgaacattt tcatcttcattcagcatgtttccGGCTACCTATATAAGATAgatccattc agcatgttgcttgttcagTTAGTAATAACAATTGTGCTTCGTCGTTTACT ATTTCATTCAATAAACGATACCTTCTTTCTTTGTTACAGGTGAAGGACGA GTTGATCTTCACTATTTTGGAATCAATCACGGGTATGGAATGACTGTCTT TGTTTACCAATCACCAACAGGAACGACTGAAAACAATGTAGCTTACATCT CTGATCTAGTTCTACCAAACCGTGTTTTCTTTGCTAGCATGCCTGACTAC AACACAGTGGAAACCATACGCACTCTACGTcagattcaaaaactttctaT CAATAAAGCTGTTTTTAGTCATTCGAATATTGGTGATCGACCAGACGGTT CTATGAAAGAAGTCACCGATAAACTGCAATACATGCTGGATATTGAAAAC GCTGTTAAACAAGGCATCGCTGAAggaaaaaatctacttttcaaTCCTGG TCTTGTGCAGCTTCCACAATATCAAAACCTGGGA

Coding sequence (CDS) from alignment at sc0000174_pilon:347623..348556+

>XLOC_042989 ID=XLOC_042989|Name=XLOC_042989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1212bp|location=Sequence derived from alignment at sc0000174_pilon:347623..348556+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTATTCGAACAATCACCGAAAAACCCATTAAATATCTCTTGATTTCACA
CAATCATTATGATCATGCGAGGGGAGGGAAAGTTTTCAGTGATATAGGAG
CAACGGTTATCGCTCACCAAGAAGCGGCCGAATGGATGGAAGAATACCCA
ACGGATGATCTGTATTTACCTGACCGAACGTGGAGAGGGAAGAAACAAAC
TCTATGTCTAGGCTATTCGAACAATCACCGAAAAACCCATTAAATATCTC
TTGATTTCACACAATCATTATGATCATGCGAGGGGAGGGAAAGTTTTCAG
TGATATAGGAGCAACGGTTATCGCTCACCAAGAAGCGGCCGAATGGATGG
AAGAATACCCAACGGATGATCTGTATTTACCTGACCGAACGTGGAGAGGG
AAGAAACAAACTCTATGTCTAGGTGAAGGACGAGTTGATCTTCACTATTT
TGGAATCAATCACGGGTATGGAATGACTGTCTTTGTTTACCAATCACCAA
CAGGAACGACTGAAAACAATGTAGCTTACATCTCTGATCTAGTTCTACCA
AACCGTGTTTTCTTTGCTAGCATGCCTGACTACAACACAGTGGAAACCAT
ACGCACTCTACGTcagattcaaaaactttctaTCAATAAAGCTGTTTTTA
GTCATTCGAATATTGGTGATCGACCAGACGGTTCTATGAAAGAAGTCACC
GATAAACTGCAATACATGCTGGATATTGAAAACGCTGTTAAACAAGGCAT
CGCTGAAggaaaaaatctacttttcaaTCCTGGTCTTGTGCAGCTTCCAC
AATATCAAAACCTGGGAGTGAAGGACGAGTTGATCTTCACTATTTTGGAA
TCAATCACGGGTATGGAATGACTGTCTTTGTTTACCAATCACCAACAGGA
ACGACTGAAAACAATGTAGCTTACATCTCTGATCTAGTTCTACCAAACCG
TGTTTTCTTTGCTAGCATGCCTGACTACAACACAGTGGAAACCATACGCA
CTCTACGTcagattcaaaaactttctaTCAATAAAGCTGTTTTTAGTCAT
TCGAATATTGGTGATCGACCAGACGGTTCTATGAAAGAAGTCACCGATAA
ACTGCAATACATGCTGGATATTGAAAACGCTGTTAAACAAGGCATCGCTG
AAggaaaaaatctacttttcaaTCCTGGTCTTGTGCAGCTTCCACAATAT
CAAAACCTGGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042989XLOC_042989-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174_pilongenomesc0000174_pilon:347623..348556 +
Properties
Property NameValue
Aaloc214-606:542
Aaloc1-210:1