|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000517_pilon:43364..45981+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042983 ID=XLOC_042983|Name=XLOC_042983|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2618bp|location=Sequence derived from alignment at sc0000517_pilon:43364..45981+ (Clytia hemisphaerica_ch_hm2_pilon)
atgactTTACAGAATGAAACACCACCTATTTTGGCCTCAAACTTCAGTAT
CAGTAAGTTTTTTCATTGTCAGTCGAAATATTAGAAATGTTAATTATACT
ACTGGCTGCAAATGAAGCAATTACAAGTTATCTATGATCTTTAGGACTTT
ATTAAAGATTGAACTATTATTTATGCTTTAAAGCAAGAATGAAGAAATTC
GTGCAGGCAATACATAAGATAATCAAAGGATGAAAAACTGATGTATTTTG
TTTTGAATGCTATTACCGTTTTGTCATTCTATAAATTTGCCTTTCTTATT
TTAGTTGTTGGTGTGATAGAGCAATATGGATGGTTTTTATTGATTGGGTG
TATACTTGTCATGTATCTTTACAATAAATATAAACCAAcattaatgaaaa
tgaaacaaaaccaTGAAGATTGGAAGGAagcagaaataaataaaaaaggt
gATACTGATATTGTTTTTGCTTCATTTGAAGAGGTGCATTGGTGCAAAAT
AGGGCGAATGAGACAAAGCATTTTAAATAGCCCTGGCAAACAGTAGCAAA
ATTTACAGggtatttgatttgattttgaaaatttggcgaGTCAGCTATCT
CATTGAttcattttcgcaaaaaaaggcaaaaaattgaacaaaaattaaat
ctcagaaaattaatccaataaaaGTACTCTTTTGGCTAGTCATGTCATGT
TGTAGTCGAAAGTCATCATGTATATAATACCAgttccaacttttttttca
gatcCTGATAGGGTTCACAAGGTCCAATTATCAATGGAACAAGCACGATT
GAAACTCCAACAACAAGTTAATGTTGATTCAGAGAAAAGGAAAGAAGCAG
ATTTAAAGGTATACCTTCGATGTTGTGaagaataaaataatatttgtaaa
caagaaatctgaaaaatgattttagttGTGTCACTTTTTAATATTGTGGG
AGGGTTCAACGAATAGCCATTTTTTGATGCAAAGTATTTTCGTGAGACAT
TTACGTAACATGTatacaaccccttctcacagaccgaCCCTTTTTCgctg
aaaaaattgccaaaatatcgtccccaggaCCAAAATTATACCCaaatttt
tgtctccgctgaaaTTGAttaatgaggcccccccagcggcactaatcacg
ccatcacgcaaaaaaatttctccaccacgcatcacgaaaatcgctaaaat
ttgtcatcacgcaaaaaatagcgaaaaatagcccaaatcacgcatcacgc
ctcaaatttttgccctatcacgcatcacgccaaaatcttgaccacgccat
cacgccaaaaaaatctctaatcacgccatcacgcaagaaaaaagtcccaa
tcacgccatctggggggggCCCTCATTAATAAAAAAGTACAGTGAGAAAC
TGCAAAATTTTGCGCTAtgttttccatccccactgaacattaaagcttta
aaaatatgggaatatcaatcctcatGTAGTTTTAGTCCATTATTTATTTC
CCATtggctaaaaaaatcctaccaggtcgGTGAGAAAGGAGTTTATGtag
gtttttagtttttaggGCTTTTAAAAGCTCTATAATTATAAATTTCAGTA
TTTCACATTAAATTCTCATATTTTTGTATCTACAGCGTGAAGAGGCACAA
AGACAGaaaaaaaTCGAGGAGTGGGAAAACCATCAACAAGGCCGTGGATA
TCATAATAAATCGAGATTTTCAGTAAGTCTTAGGGTCCAACGAGGGAAAA
AGCCATAAAGAAGTAGAGAGTTGGTTTTGCCATTATAAAAAAGTGATATC
CTTTTTCAATATAACTTTGTACCTTTCTACATTTTGGGCATTAAATCATT
TCATAATTATTGTACCCTATAATAGTGATGAGGTGATTTCTTTCTCTAAA
ATAACATTTGTAAAGCGCAATATAgcttaagggaactttttttggcggga
acttattttggtgaatgacagcgtattttgccttattttgagcaattttg
atgaatttcaggggttatttaagcaaggaaacaaaaaaattaattttggt
gggaacttattttggcgagtgagcaaaatatttaattttggccaaaataa
gttcccttaaggtaatacaTACTTCTTGTTCGTAGAATCCATCTCCGGAT
AATGACAGTGGCTCAAATAACACTTCAAAACCAAAGAAGAAGAATACTAC
AATGAAATCAGGTACATAGTACATACACACAATCTCTTGTTATCATTTTC
TCTAAACCACTGGGTCTGTAAAATAGAAAACATGGCCGACTAGTCGACTT
CCAAACTGGACATACTTCCATGGAAAATATGTTAGGTctatctagtgtgt
aaaagaatatgatatTTGTGCTCTAAACACACATTGATGTTATTGTTTTG
TTATTCCATTTGAATACAGCATCAGAGCTGTCTGGGAGTTTTCGCTTTAA
TGGAGAggggggggTGCGGAATGACAAAAGCTTTAAATTATGACTTAGAA
GAAAGGTGAAATGTCTAAACTTTAACTGGTCcatttttaattctcttttG
TTTTAGACTTCAATGCTTTATCAGGAGATGGAGGAGGCTCGTGCAGTTAT
CGTCCCTCAAGCCGATTT Coding sequence (CDS) from alignment at sc0000517_pilon:43364..45981+ >XLOC_042983 ID=XLOC_042983|Name=XLOC_042983|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000517_pilon:43364..45981+ (Clytia hemisphaerica_ch_hm2_pilon)
atgactTTACAGAATGAAACACCACCTATTTTGGCCTCAAACTTCAGTAT
CAatgactTTACAGAATGAAACACCACCTATTTTGGCCTCAAACTTCAGT
ATCATTGTTGGTGTGATAGAGCAATATGGATGGTTTTTATTGATTGGGTG
TATACTTGTCATGTATCTTTACAATAAATATAAACCAAcattaatgaaaa
tgaaacaaaaccaTGAAGATTGGAAGGAagcagaaataaataaaaaagTT
GTTGGTGTGATAGAGCAATATGGATGGTTTTTATTGATTGGGTGTATACT
TGTCATGTATCTTTACAATAAATATAAACCAAcattaatgaaaatgaaac
aaaaccaTGAAGATTGGAAGGAagcagaaataaataaaaaagatcCTGAT
AGGGTTCACAAGGTCCAATTATCAATGGAACAAGCACGATTGAAACTCCA
ACAACAAGTTAATGTTGATTCAGAGAAAAGGAAAGAAGCAGATTTAAAGa
tcCTGATAGGGTTCACAAGGTCCAATTATCAATGGAACAAGCACGATTGA
AACTCCAACAACAAGTTAATGTTGATTCAGAGAAAAGGAAAGAAGCAGAT
TTAAAGCGTGAAGAGGCACAAAGACAGaaaaaaaTCGAGGAGTGGGAAAA
CCATCAACAAGGCCGTGGATATCATAATAAATCGAGATTTTCACGTGAAG
AGGCACAAAGACAGaaaaaaaTCGAGGAGTGGGAAAACCATCAACAAGGC
CGTGGATATCATAATAAATCGAGATTTTCAAATCCATCTCCGGATAATGA
CAGTGGCTCAAATAACACTTCAAAACCAAAGAAGAAGAATACTACAATGA
AATCAGAATCCATCTCCGGATAATGACAGTGGCTCAAATAACACTTCAAA
ACCAAAGAAGAAGAATACTACAATGAAATCAGACTTCAATGCTTTATCAG
GAGATGGAGGAGGCTCGTGCAGTTATCGTCCCTCAAGCCGATTTACTTCA
ATGCTTTATCAGGAGATGGAGGAGGCTCGTGCAGTTATCGTCCCTCAAGC
CGATTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000517_pilon | genome | sc0000517_pilon:43364..45981 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 469-528:2559 |
| Aaloc | 391-465:2136 |
| Aaloc | 304-390:1636 |
| Aaloc | 199-303:754 |
| Aaloc | 55-195:307 |
| Aaloc | 1-51:1 |
|
