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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000517_pilon:19144..25920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042977 ID=XLOC_042977|Name=XLOC_042977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6777bp|location=Sequence derived from alignment at sc0000517_pilon:19144..25920- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGACATTTCGGAGATTGGAATAACATATCATCTGAGCACAGAAAA
TATCATCTCTGGTCAACTGGATGACTTTGCAAATCTAACAAAGTAAGTAT
TTTATTAGTTGTAACATTGATGTCGTATGTAACATTCAAAACAAAAATTT
TAAAAGCAGATTGACAGTATTTGGAAACATGTCGGTTTTTTAATATTTGG
AAAAGTCTTGACCAGTAAAGATAAAGGGAAACAACCTTTTTTGATTACAT
CTTTTCTATATTCGCACTCATTCCTTCAGAGTCCGAGAGAGTTATATTTT
CATTTATTTAGAGAGTTTTTTGACAACCTTACAAAAGTTTACAGCCAACG
TGGCAGACCACCTACCAACACTGAAGCACTCAATAAGGTTCGAAATTTGT
ATTGCATAATTATGATATTAAGTTTATCAGGTAGGTTTGACGTCAAAATC
CTTTGTCTTGGAGAAAATTAATACAACAAATTTAGAAATATGTCAATCTC
CTTTACACTTTAAAGGTGAATTATAACACAGTAACCCTTAGGGGCCATCC
ATATAGTACGCATGCAATGAATGGGGGAGGGAGGGGATTAGCAAAAGTGT
AGGTCTATTGTTTAAATGGCATCATTTATATTGTTCTCTGCATACCAGGG
GGGAGGGGGTATCCAATATTTGAAAAAATTATGCGCACGTTCTATATTTA
TATACATTAAAACTAAATATGTCCTATCAAAAAAGATTCATCATAAATGC
ATATTTTGTCACAGTGAAAATTTTTTTTCTTTCAAACCTTTCAGATTGGA
GAAGATTTGGCTTACAAAGGCAATGATTTGAAGAAAAGTTTACAGACAGG
TTTATTATATGTTTCCTTATCCAGGATGGTGCACTACTGCATTTACTGTT
ACTGAATTTATTATTTAAAAAGTTACGTAACTGTTTTGATTTCTTGCACC
TAATTCTTAGATAGAAATTTTTGTCAATTTTAAAGATTCTTTGCGGTGTT
GTATATCATAAATGACAATAGTGATGACAATGGATGACAGTACATGGGAT
CCTCCCTCCCCCCAGGAAGATAGGGGGGTCAGCTTTTGTCCTGGAGAGGG
AAGTGAATATTTTCACCTTGATGGGGGACTAATACAAATGGGGGATTTCA
GGATATTTTAATGGAAGTGGGAGTAGAAATTGCAGAAGTTAGATATAATG
ATAATTCAAATAGATGATTAAATGTGTCTATTTCCAGCATTTGTGTGTTC
ATTGCAGGAAGTCTTTATTTTTATCAAGTTATTATGCAAAACTAGCCGGT
ACCCAGCGTCGCACGCCGGTTTAGCTGTTTGCTGAACGCATTTAAAGTCC
TTTGAGATGTTGGGAAGGTGGCTTAAACACGATAAAATCAAAATTTAAGG
GAAGAATTCTCTTTAAAGTTTTACTCTATCCCTCCCGGGTGACGTATCTT
TTAACCATATTTTGAAAAAGATTTTTGTGGCAAAAATGATCAGAAAACAG
AAAGGGCATCATTCCCAAATTACACCATACCGGCGACCAGCGACGTCCGA
GACGGCTCTGCAATTAGATTTTTTTTCTCGCTTCGCTCGCGTTATATATG
CCGTAGTTCTTGATGTTTAGGAAAACTTTGATGTCAAGATAAGCGGAGTG
AAATAATAGACATAACACGCGATTCGTCGAAAAAAGGCAGCCCGAGGGGG
GGGGGGGGGTACTTAGGCAAGAGAAGGGTATGGGTATGGGTATGTGCCGG
CCTTAAGTGTGCCTTTTTGAAACATGGCAGTTTGAAAAATCAGAAAATCA
AACTTCAGTCCCACTATTAAGAATCGGAAAAATAGGAAAATTTCAACTTT
TTGCCCCCAGAAAGATAGAAATTTGGTCAAATTAGTTCCAAAAAGTGAAT
TAAAATTCACACAATTTCCCTTGTTTCTTCTCCTCTTTATTCTGCTAAGG
GTCCGAGGGGCAGGGCCGAAAGTCAGCTCGCAACCATAGTCCCCCGGAAG
GCAGCTAGGACACGCAGACAAAAAAGCGTGATAGATAGCGCAATTTTATA
TTGTTTTTTATAAAATAACTTCGTCATAACTTCAATAATTTTTCAAATTC
AACAATGACTTAGATTTACAGCAAAATAATTATCGACATACATGTTTAAA
GGTCCGTTTTTACGAGAAAGAATTTTAGTTTTTACCGCCTTTTGAATGTA
TTTTTAATGTTGCTGTTGTTCTAACAAACTTGTTATGTGATTCTTGTGTT
TTATTTTATATTTGCTCTTTTCTTTAACAGATTCTGTTTAAAAAATTTCT
TTTGTTTTGAAAAAGAATTCGAATGTCTCAAATCAAATAAGGTCGTTAAT
TACATTCGAAAACATAAAACAAAAGAAAAGAAAGAAAAAAGAAAGAAAAA
GTCTAATCTATCAATCAAAACGGCGCGAATATCGTTAAACAAATTTGTGG
AGCAAGAACAAAATAAAAGTCATCTTTTAAAAGAACAAAACATTGCTTGC
GAAAACGAAAGTGACACACAAACAAACAAAATGACATACAGACTACGGCT
ATTAATATATAGATATAGCAAATCGTTGGGTCACAAAAATATTCTTCAAA
TGGGGGAGAATCCCGGAAAAAGGGTAGGTGGGGGAGAAGACCAAATGGGG
GTTTTAGTCCCTAAGATGGGGGAACCTGAAAACCTTGAGGACACCATGCA
GTTATTTTTACTAAATCGTTTTGAGCTAATTTTTGATAGCAAACAACAAT
GACGTGAAACATTTGAAGATTCGAAACTGGTCGATTCTGTGGAACTTTCC
CTTCTCTTTTCATTTGTAATTCATTTGGTAACAAACAATGGGATTATCTT
TGACTTTTTTGACTTTTTTACAGCAATCGAACAAATCAACGTTTGCAAAG
ATATAGACAAGGTGAAAGAAGAAATAACAAAAGTTGAAAAAGAGATATTA
CAAACACATTCACAATTGAAAGAGGCTGAAAAAATACTTGTAAGCACTTT
TGTTACAATTTCCATTGATCTGGTACCACTATAATAGATCTAAGGTTGTT
GTATACTCACATTTTATTTTCAGGCAGTCGCTGTTTTCCAAGCAAAAAAG
AAGTTAGAAGCAGGCAAACAAGCCAAGTCTGGTAAGATCAGTTTTATTTC
TCCTACTCTATTTTGCTCAAGAAGTCAATAATTGGACTAAGCTAAGTATT
AAATGGACATAACAGTACTTGCGAAATTTGTAAACAAACTGTATGCAGCG
GATACAAAATCAAAACAAATGTCACATTTCAACTGTTTCAAAATAAAAAA
TCAAACCAAATATGGCTAATTGTTTTACAAGTTTGTTTTGGACACGTGAT
TTTAATTGTTCTTTTTAATGACACGTGGTTCGCGCAATGTTTACATTTTA
CTACTGTAATGTCCCTTTAAGTATTTCTGTTAATTTTTATACTCAATTAG
CAGAAAAGGACTTGATTTAAAGAAAAAAGTGAAGACCTTTGTTTTGTTTT
GTTTTTCTTAACTTGATATGGCAAATGTATCGAATCCATACTTGAATTTC
ATATGTCTAATTATGGCTAATTATATTCATAATGGCGTTTACAATATTAA
AATTAATCTTTTTCTTCCAGCTTCAGTATCATGCGAAGATTTGATCAAGT
TTGCATTTCGTATAAGTAGTGGAAATTCTGTGGAAGCTCCTCAAGATTGG
AAACCTGGTAACGTTTTGTTTTCATTCATATGTGTTTTATATGAAAATGA
GGAAAAAGTTGTCTGTACACAGACCCGATATCTACAGCTAATTTCAAAGT
TCATAGCCGTAGAGGGACCTGTTGTCATTGTCTTTTCTCGTTTGAGATTT
TTCAAACCGACCGCTGTTTTGGAGTGTTGGTGAGAGAGGGGAGGTGATAA
GAGAAAGGTTGCTATTTATAAATCATACTTCATCGCAGAGTTCTCCGTAC
GGGAATTTTTTTATCAGACAGACAATGCGCACAGAGTGAGATACACTCTG
GTACAGAGAAGGAAAAAGTGGACATACAGAAAACATATAGAAAATTATCT
TTGTCGCTAACAGAATGGATATTTTTTTCTGGGAGCACTTGTATTGCATT
ATTTTGTGGAGGTCACTGTTAAAATAAACAAACGATTGTAGGTATTTTCA
AATTGTAAGAGTAAGATAGGTGTTGAAAATACCTACAAAAACAGTTGTTA
TGATCAGTTCGGCTTACTACTTATTATATGTATTACTGAATAGAAACACG
CAGGTTATTTCTGTTGCAAAATATCTTCTAAACAAATAGATGAATTTATT
TGTCTAAACAAATAGATGAATTTATTTGTTCGCCAGAAAGCTTAGATTTC
ACCGAATCATTTTAATTGTGATCACATCGTAATTTTTACTTGTATTACCG
TAACTTCGTGTAATGCCGACATACCTTGTCTAATTTCGCAACTATCTGAT
CTTTGAAATGTTTACAGATAAAACCCTCTGAATAACCTGTTTCGTAACTA
CTTTGCAGACCAGATAGTTGCTATGGCGGAATTGGACAAGCTATGTCGAC
ATTACACGAAGCTACAGTACTAAATAAGAAACGTGTATTTTTATGCCACA
GGGGATCCACGAAGACCATATCCATTATAAGAAACGTGTATTTTTATGCC
ACTTTTTCAGGGGATCCACGAAGACCATATCCATTATAAGAAACGTGTAT
TTTTATGCCACTTTTTCAGGGGATCCACGAAGACCATATCCATTATAAGA
AACGTGTATTTTTATGCCACTTTTTCAGGGGATCCACGAAGACCATATCC
ATTATAAGAAACGTGTATTTTTATGCCACTTTTTCAGGGGATCCACGAAG
ACCATATCCATTATAAGAAACGTGTATTTTTATGCCACTTTTTCAGGGGA
TCCACGAAGGCCATATCCATTATAAGAAACGTGTATTTTTATGCCACAGG
GGATCCACGAAGACCATATCCATTATAAGAAACGTGTATTTTTATGGCAC
AGGGGATCCACGAAGACCATATCCATTATAGAGTTTTTATTTTTTTTCGG
GATCCACGAAGACCATATCCATTATAAGAAACGTGTATTTTTATGCCACA
GAGGATCCACGAAGACCATATCCATTAGACATTGAAATGAGCACGAAGCT
ACAGTACTAAATAAGAAACGTGTATTTTTATGCCACAGGGGATCCACGAA
GACCATATCCATTATAAGAAACGTGTATTTTTATGCCACTTTTTCAGGGG
ATCCACGAAGACCGTATCCATTAGACATCGAAATGAGAAGTGGTACATTA
GGACAACTTTCTCTCAAGAATGGAGATGCAATGACTGTTGATGAGAATAA
CACTGAAGGTGAGTGGTAAATTTACCTGAAAATTCTCACACAAAAGAGTG
TTGAAGTATATCACTACCAGCAGATTGGGCTTTTCCGTACCCCCCCCCCC
CCGGCTGAGGATATCCATTTTTCGAGTTCCAAAGCCCCCCTGGATGTCTG
GATTAAAAATAAAGACTCCCCTGGATATCCGACCTTGACAGAAAGAAACC
CCCTGGCTGTCCAATTGGATAGAAGGGTCGAGGATGCATTTTGTCATGTA
CCCTCTGGATATCCTCTCTTTATAAGGTCCTATCCTCAACAGAAAAAAAG
TCTATTGTTGCCATAGGAATACTAATACACTTTTCTATTTCAAAACTATT
TTTAAGTTTTTTCTGTTTCACTCAAATTTTAGTTTTGATATTCTGATTTT
CACAACAAATTGGGTCGCTCTTTTAACATACATCTTCTTATTAGCTTGTC
TTCCCACTTTTTCAGAAGTGTTGAGCAACAATTCCTCATTTTTGTTTACA
ACTTTTTTTTATATTTTCAAACCATTCATTTAGATAACAAAACTGGCGGA
TTATGGCAAGGTACATCTTCAACTGATGACAAAGTAAGACTTTGATAAAT
ATTTTCGTTTGTATTTTTTCATCAAATTTCGTCCACATGGTTATATGACT
GGCAAGATCTTGTCCATAATCCTTATTTTTCAGCGCTATAGTGTTGTAAA
CAGCAAAGGGTGTTTTTTTGTTTGATCTTTTAGAAAATAACATCACGAGC
AACATATACTTCGTTTTCAAAATATTGCTATGTTAATTGATTTCCAAAGG
AGTTCATAAGAAGTTTGCTCTATTTATAAAAGCAACACTTGAAGACTCAA
GGGATTTAATCAACATTGAATAATGGTTTCAAAACGAGGAACTCGTAGTC
TGGACCCATACAAATTTTTACTCCATTTCACAAAGCTCACATGAGATAAA
AATTAGTATGGTAGAATTGGAGATTTTGAATTTGCCACCAGAAAAAAAAC
CGTTTGAAAACTGGCCAATCAGAATTTTGTTGCATAAATTTATCGGGTGA
ACAATAGACATAATCGGCCAATCAGAAGCGTTTCTACAAAAAATTGTAGA
AATTTTTGTCCAAAACTACCCGTCTACTATCGAGTTCAGAAAAAATCTTG
AGTAGACGGGGCCCCATCTAAGGCACTCGTTGCACTCAAATAATTTATGA
AAATGGCTATTATAACAGATAATTTTCAGATATCTTATTGTATAAGATTT
TCAACTGTAACCAATAGCTAGTTATTGTTTTCTCATCTTAAATAGGTACA
CCTGGCGACAATGCCGAGCGCTCTACTCTCGAATGTCAACAAAACATCAT
CCCAGCAAGCAAACAATGAAGAAGTTGAGTTCATGTCTACCTCATCAGAT
TCATCTAGTAGTGGTGATAGCACGTGA Coding sequence (CDS) from alignment at sc0000517_pilon:19144..25920- >XLOC_042977 ID=XLOC_042977|Name=XLOC_042977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1554bp|location=Sequence derived from alignment at sc0000517_pilon:19144..25920- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAGACATTTCGGAGATTGGAATAACATATCATCTGAGCACAGAAAA
TATCATCTCTGGTCAACTGGATGACTTTGCAAATCTAACAAAATGGTAGA
CATTTCGGAGATTGGAATAACATATCATCTGAGCACAGAAAATATCATCT
CTGGTCAACTGGATGACTTTGCAAATCTAACAAAAGAGTTTTTTGACAAC
CTTACAAAAGTTTACAGCCAACGTGGCAGACCACCTACCAACACTGAAGC
ACTCAATAAGAGAGTTTTTTGACAACCTTACAAAAGTTTACAGCCAACGT
GGCAGACCACCTACCAACACTGAAGCACTCAATAAGATTGGAGAAGATTT
GGCTTACAAAGGCAATGATTTGAAGAAAAGTTTACAGACAGATTGGAGAA
GATTTGGCTTACAAAGGCAATGATTTGAAGAAAAGTTTACAGACAGCAAT
CGAACAAATCAACGTTTGCAAAGATATAGACAAGGTGAAAGAAGAAATAA
CAAAAGTTGAAAAAGAGATATTACAAACACATTCACAATTGAAAGAGGCT
GAAAAAATACTTCAATCGAACAAATCAACGTTTGCAAAGATATAGACAAG
GTGAAAGAAGAAATAACAAAAGTTGAAAAAGAGATATTACAAACACATTC
ACAATTGAAAGAGGCTGAAAAAATACTTGCAGTCGCTGTTTTCCAAGCAA
AAAAGAAGTTAGAAGCAGGCAAACAAGCCAAGTCTGGCAGTCGCTGTTTT
CCAAGCAAAAAAGAAGTTAGAAGCAGGCAAACAAGCCAAGTCTGCTTCAG
TATCATGCGAAGATTTGATCAAGTTTGCATTTCGTATAAGTAGTGGAAAT
TCTGTGGAAGCTCCTCAAGATTGGAAACCTGCTTCAGTATCATGCGAAGA
TTTGATCAAGTTTGCATTTCGTATAAGTAGTGGAAATTCTGTGGAAGCTC
CTCAAGATTGGAAACCTGGGGATCCACGAAGACCGTATCCATTAGACATC
GAAATGAGAAGTGGTACATTAGGACAACTTTCTCTCAAGAATGGAGATGC
AATGACTGTTGATGAGAATAACACTGAAGGGGATCCACGAAGACCGTATC
CATTAGACATCGAAATGAGAAGTGGTACATTAGGACAACTTTCTCTCAAG
AATGGAGATGCAATGACTGTTGATGAGAATAACACTGAAGATAACAAAAC
TGGCGGATTATGGCAAGGTACATCTTCAACTGATGACAAAATAACAAAAC
TGGCGGATTATGGCAAGGTACATCTTCAACTGATGACAAAGTACACCTGG
CGACAATGCCGAGCGCTCTACTCTCGAATGTCAACAAAACATCATCCCAG
CAAGCAAACAATGAAGAAGTTGAGTTCATGTCTACCTCATCAGATTCATC
TAGTAGTGGTGATAGCACGTGAGTACACCTGGCGACAATGCCGAGCGCTC
TACTCTCGAATGTCAACAAAACATCATCCCAGCAAGCAAACAATGAAGAA
GTTGAGTTCATGTCTACCTCATCAGATTCATCTAGTAGTGGTGATAGCAC
GTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000517_pilon | genome | sc0000517_pilon:19144..25920 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-777:133 |
| Aaloc | 598-645:893 |
| Aaloc | 487-594:1529 |
| Aaloc | 400-483:3156 |
| Aaloc | 340-396:3705 |
| Aaloc | 226-339:3903 |
| Aaloc | 169-222:5984 |
| Aaloc | 94-168:6466 |
| Aaloc | 1-90:6778 |
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